Pituophis catenifer annectens (San Diego gophersnake): 139321849
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Entry
139321849 CDS
T11059
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139321849 (AP5B1)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
139321849 (AP5B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
139321849
NCBI-ProteinID:
XP_070806867
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGSRGGESWTATVEAFRLSPTAFLLSHGAGDTLAADLLNELRSEKLGEAIKLSILSLFLE
YPTLLCPDAKAGQEAAASLLSLFAQLSLSPKHVGLRCSLLFAAETVLVATDSLGEDCPTS
HELLSVLLHLVSDPNDSRGGVVERPIRAAACECLRELESCYSGFLLHRLEILRSLQQQEV
SSVHQGYTLLYSVALRNAIFLLARNGQGCLGDLLASNGELMWEATKEVGKLSPAALDQLV
LLPSAADLKELKLVLSALLESSYLLTSAAQSHLLCHLAQAVSVVRTQSPAIFKAQLARLF
GTASVTLEHAILQLKSLFTDSLFTAEDESFLLRHLVGLAQHPALPDAVKLFYLDCLLHFP
ENRPLVSGTDEQLPVLLTPRTTSGLFPGFFQDQGTVLARMNLLCLVCMENEGPSAERGAG
YLLEHVLALGGLVARDGGLDATRLFFQAAFIFAQYFGSQAQPMTELTRCLLDLYRQNCTL
APNIINLLDETWKTLDESSWAKTLAQALQEFVVSVPLQEEDLSWHLKILARLAKEKEVPQ
VSTMHFLARLVASGKLGDWRSGQILLSVCRNLMVLHPSPALSQLAALLHAISLNHTDVDV
QDRAGFYYTLLTNLSGEKLRSVLVPEGSIKTRSLSSSIVADSESFVAALTVHSVDPAPLK
LQRVEITGDTPAVPPAEQEVDGYCQWLLVDRSSSWLSLAYRLVHAGPGTPPYDLLLCVVL
RFTCTNRHYEPVPELCIPYLSAHRPSPTVRLSLQPHCPYPTRINVSALYTTQDGLTRWSR
LENLEVAFPDLFLPLPVPDWSSEKCCQLFEALWQCLHPNAKDAHAESLTVWPLPPWSLEG
LVREQFGRYILAEEGDEYRIALTLPPRDHILLKVRSVDDAGRVSIRTDNWKLLPSLNHYL
QSLVKGS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaagaggcggagagagctggactgctaccgttgaggctttccggctgtccccc
actgcgttcctcttatcccacggggccggggacactttggcggccgacctgttgaatgaa
ttgcggagcgaaaagctgggggaagccatcaagctctcgatcctgtctttattcttggag
tatcccaccctgctgtgccccgatgccaaggcgggtcaggaagctgcagcctccctcctc
tccctctttgcccagctgagcctctcccccaagcacgtcggcctccgttgctccctgctc
ttcgccgcagaaacggtcctggtggcgaccgacagcctgggcgaagactgcccgacatcg
cacgaactgctctccgtactgctccatctggtgtctgatccgaacgacagccgcggggga
gtcgtcgagcggcctatccgtgccgcggcttgcgagtgccttcgagaactggagagctgc
tactcagggttcctgttgcaccggctggagatcctgcggtctctgcaacagcaggaggtc
tcgagcgtccaccagggttacaccttgctgtatagcgtggcgctgcggaacgccatcttc
ctcctggcccggaatggacaaggttgcctgggggaccttctggcaagcaacggagagctg
atgtgggaggctacaaaggaagttggcaagctctcgccagcggccctcgatcagctggtc
ctcttgccatccgcagcggacctcaaggagctaaaattggtgctctcggcgcttctggag
agcagctatctcttaacctccgcggcacagagccacctcttgtgccatctggctcaggcg
gtcagcgtcgtgcgcacccaatcgcccgcgattttcaaagcccagctggcgcgtctcttc
ggcacggccagcgtgactctggaacacgccatcctgcagctaaaatcgctgttcactgat
agtctcttcaccgctgaggacgaatccttcctcctgcggcacctggtgggactggcacag
cacccggctctcccggacgccgtgaagcttttctacttggattgtcttttgcacttcccc
gaaaaccggccgttggtctcaggaaccgatgagcagctgccagttctgctcacgccgcgc
actacctcgggtctatttcctgggttcttccaagatcaggggaccgtcctggcccggatg
aatttgctgtgcctcgtgtgcatggagaatgaggggcccagtgccgaacgtggggcaggt
tatctcctggagcatgtcctggcccttggaggcctagtggcccgagacggaggattggac
gccacacggcttttcttccaagcagccttcatttttgcccaatattttggctcacaggcc
cagcccatgacggaactgacccgctgcctgctggatctctaccgtcagaactgcaccttg
gccccgaacatcatcaatctgttggacgagacgtggaagacgctggatgagtccagctgg
gccaagaccctcgcccaggccctgcaagaatttgttgtgagtgtccccttgcaagaggaa
gacctaagttggcatctcaagattttagcccggctggcgaaggagaaggaagttccccaa
gtgagcaccatgcacttcttagctcgtctggtcgcctcggggaaactcggggattggcgc
tctggccagatcctactcagcgtttgccggaacctgatggtgcttcacccctcgcctgcc
ctgtcccagctggcggctctcctgcatgccatctccctgaaccacacagatgtcgatgtc
caagaccgagctggcttttattacaccctactcaccaacctttctggtgaaaaattaaga
tccgtcctggtccccgaaggttccattaagactcggtcgctatcctcgtccatcgttgcc
gacagcgagagttttgtcgctgcgttgacggtccactcggtggatccagcccctttgaag
ctgcagcgtgtcgagattacaggggacacccccgcagttcctcccgccgagcaggaggtg
gacggctactgccagtggttgctggtggaccgctcttcctcatggctcagtttggcgtac
cggctggtccatgcggggcctggcacgcctccctacgacctcctcctctgcgtggtgctt
cggttcacctgcaccaaccggcattatgagccagtgcccgaactctgcattccgtacctt
tccgcgcatcgcccgtccccaacggtgaggctgtcgttacaaccgcattgcccgtacccg
acgcggataaatgtttctgccctttacacgacgcaagatggattgacgcgttggagtcgg
ctggaaaacctggaagtggcctttccggatcttttcctacccctgccagtgcctgactgg
tcttcagagaaatgttgccaactttttgaggcgctctggcagtgcctgcatcccaacgcc
aaagacgcgcatgccgagagcctcaccgtttggcccctgccgccctggtccttagaaggc
ttagtgcgtgagcaatttggcaggtacatcctggctgaggaaggcgacgagtataggatc
gccctgactttaccgcctcgggatcacatcctgctaaaggtgcggagtgtggacgatgcg
ggccgggtgagcatccgaaccgacaactggaagctccttccctcgcttaaccactatttg
cagagtctggtgaagggcagctga
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