Pituophis catenifer annectens (San Diego gophersnake): 139321862
Help
Entry
139321862 CDS
T11059
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139321862 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
139321862 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139321862 (THOC5)
03041 Spliceosome [BR:
pcae03041
]
139321862 (THOC5)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139321862 (THOC5)
Spliceosome [BR:
pcae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139321862 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Inhibitor_I53
Motif
Other DBs
NCBI-GeneID:
139321862
NCBI-ProteinID:
XP_070806889
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRMDGGPQEGKRSRSDLDQDARYYSEEAEVELRDPNRDYELYKQTCQ
DLQRLMAEIQELKSKGHKDSAAEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVDEFYKEAPPEISKSDITL
HDPHEQTLSRLDWELEQRKRLAEKYEESLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYFAMPFDQVHKQYETARHLPPPLYVLFVQASAYGQACDKKLAAAIEGNVEEAKAL
CKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTINLKCKDGSLL
LLTFYYLMNLNVLTVKAKMTAATEMTVPISAGDLLCPDSLLSCLYPGDHGKRTPNPANQF
QFDKVGILTLNDYVPELGHPYVWVQKLGGLHFPKDQPQNPVVADNSLSASHMERTMKLLK
MRLESRLALHKQFASLEHGILPVSPESQHLFPTKIVSHLVKWMSLTYEDYLELPYTKDVV
ESGLAEDTHLYYLALIERGTAKLQVAVVLNPGYSSIPPVFSLCLNWKGEKTNTNDDNIRA
MESEVNVCYKELSGPKPGYQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLR
LARGPSRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgaatccagcaagaagcggaagccgaaggtcattcgcatggatggagggccg
caggaaggcaagcggagcagatcggaccttgatcaggatgccaggtactacagcgaagag
gccgaggtggaactgcgagaccccaaccgagattacgagctgtacaaacagacgtgccag
gatcttcagaggctgatggcggagatccaggaactgaagagcaaagggcacaaagacagc
gcggcggagatcgaagagcgacggatccagagctgtgtccacttcatgactctgaagaag
ctcaaccgcttggctcatattcggctgaagaaggggagggaccagactcacgaggcgaaa
cagaaagtcgatgcttatcacctccagctccaaaatttactctacgaagtgatgcatttg
cagaaggagatcacaaagtgtttggagttcaaatcgaagcacgaggagatcgagctggtg
agcgtggacgagttttataaggaagcgcctcccgaaatcagcaaatcggacattactctc
cacgaccctcacgagcaaaccctctcccgcctcgactgggaactggagcagcgcaaacgg
ctggcagagaaatacgaagaaagtttagccaacaaagagaagatcctcaaagagatagaa
gtgaagaaagaatatctgagcaatctccagcctcggcttaacagcatcatgcaggcctct
cttcctgtccaggagtacttcgccatgcctttcgaccaagttcacaagcaatatgaaaca
gccaggcatctcccacccccactctacgtcctctttgtccaagccagcgcctacggccag
gcctgtgataagaagctggccgcggctatcgaaggaaacgtcgaggaagccaaagctctt
tgcaaacctccggaggactctcaggacgacgagagcgattccgacgtggaggaggagcag
actacgaaacgtcgccgaccaactttgggggtgcagctggatgacaagcggaaagagatg
ctgaagaggcaccctctgtccgtcaccattaacttgaaatgtaaagatggcagtttgctg
ctcctgaccttttactacttgatgaacctcaacgtcctgaccgtcaaggccaagatgacg
gcagccacggagatgacggtgcccatcagcgctggggacctgctgtgccctgattctctt
ctgagctgcctctatcctggggaccacggaaagaggaccccaaaccccgccaaccagttc
cagttcgacaaagtgggcatcctcaccctgaacgactacgtgcctgaactgggccaccca
tacgtgtgggtgcaaaaattgggaggcttgcacttccccaaggaccaaccccagaaccct
gtggtcgccgataactcgctgagtgctagccacatggagaggaccatgaaactgctcaaa
atgaggttggagtcgcgcctggcccttcacaagcagtttgcttccctcgaacatggcatt
ctgcccgtctcccctgaatctcagcacctcttccccaccaagattgtgtcgcatttggtg
aagtggatgtccctcacttacgaagattacttggagctgccttacactaaagacgtggtt
gagtccggtttggccgaagatactcacctctattacttggccctgatcgaaagaggcacc
gccaagctccaggtcgccgtagtattgaatcccggctattcctccatcccgcccgtcttc
agcctgtgcttaaactggaaaggagaaaaaaccaacaccaacgatgacaacattcgggcc
atggagagtgaggtcaacgtctgttacaaagaactcagcggccccaagccgggctaccaa
ctcctcaccaaccagttgcaacgcctttgcgttgtcctggatgtgtacctggagacggag
acgcacgacaacagcgtggagggccctaaggaatttccccaggagaaaatgtgcctgcgc
ttggccagggggcccagccggttgaaaccgttcaaatacaaccatcctcaaggcttcttc
agccatcgctga
DBGET
integrated database retrieval system
