Pituophis catenifer annectens (San Diego gophersnake): 139321994
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Entry
139321994 CDS
T11059
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139321994 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139321994 (TAF5L)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139321994 (TAF5L)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139321994 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
139321994 (TAF5L)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139321994 (TAF5L)
STAGA complex
139321994 (TAF5L)
TFTC complex
139321994 (TAF5L)
SAGA complex
139321994 (TAF5L)
SLIK complex
139321994 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
DUF7165
Ge1_WD40
PROPPIN
WD_LRWD1
Beta-prop_IP5PC_F
eIF2A
Mala_s_1-like
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
139321994
NCBI-ProteinID:
XP_070807062
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYVKRRQYVDSEGPLKQGLRLCHTAEEMAANLTVQSESGCTNVISA
APCLAEPQQYEVQFGKLRNFLTDSDSQHSQEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVIRLQEESYNFLLRYLQ
SDNNSALCKVLSLHIHLDVQPTKRVDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAAISPNSKLLAAGFDNSCVKLWSLRPK
KLKSEPHSVDVSRIHLACDILDEEAEDDDDIGTEMKLLRGHSGPVYSTSFLSDSSGLLSC
SEDTTIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPVDGSSSELVGVYTGQISNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcaccgaacagattcagatggctgtttcctgctatgtcaagcgcagg
cagtatgtagactcagaaggtcccttgaaacaagggctgcgcttatgtcacacggctgaa
gaaatggcagctaatctaacagtacaatctgaatcgggttgtacaaatgtgatttctgct
gcaccctgcttagcagagccccaacaatatgaagtacagtttgggaagttgcgcaacttt
ctgacagattcagattcccagcatagccaggaagtgatgcctctcctgtaccctctcttt
gtctacctccatctcaacatggtccaaaatggcctaaagagcacagtggacagtttctac
agtcgcttccatgggatgtttttacagaatgccagccagaaagacatcattgaacagtta
caaactacattaacaattcaagacatcctgtccaatttcaagctccgggcatttctggac
aataaatacgtgatccgccttcaggaagagagctacaacttcctcctccgctacctccag
agtgataataatagtgctctctgcaaagtcctatccttgcatattcatctagatgtgcaa
cccaccaagagagtggactaccagctctatgctagtggtggctcgtcacgtagtgagagc
aatggcctggaacctactgatatgcctgcttccatcctgcagaatgaagcagccttggat
ctcctgcaagatagcattaaaagagtcaaagatgggccaccatcccttactaccatatgt
ttctatgcattctataatactgagcagttgctgaatacagcagcgatctcgccaaatagc
aagctgctggctgctggttttgacaattcctgtgtaaagttgtggagcttacggcccaag
aagctgaaatctgagcctcactcagtagatgtttcccgaatccacttggcgtgtgatatc
ttggatgaagaggctgaagatgatgatgatataggaactgaaatgaagttattaagaggg
cactctggaccagtgtatagcacaagttttttgtcagacagttcaggattgctgtcatgc
tctgaagatacaaccatcagatactgggatcttggatgttttacaaacactgtcttgtac
caaggacatgcttatccggtgtgggacctggacatcagcccttgcagcttgtactttgct
agtgcttctcatgaccgtacagcaagactctggtcatttgatcggacgtatcccctacgg
atatacgcgggccatttagcagatgtcgactgcatcaagtttcatccaaattctaactac
ttggcaacaggatctacagacaaaacagtgcggctctggagcacccagcaaggaaacaca
gtacgtctgtttacaggtcaccgaggtcctgtcctgtcccttgccttttctcccaatggt
aagtacttggcctcagcaggtgaagaccagcgcttaaaattgtgggacttggcatctgga
acgctttacaaagaactacgggggcatacagataatatcaccagccttacttttagtccg
gatagtagtttgattgcttctgcatcaatggacaactctgttcgcgtttgggatattcga
aacacttactgcaatgctcctgtagatggctcttccagtgagctagttggagtatatact
ggacagatcagtaatgtactgagtgtacagtttatggcctgtaaccttcttttagtgact
ggaattgcacaagagaatcaggaacattag
DBGET
integrated database retrieval system
