Pituophis catenifer annectens (San Diego gophersnake): 139322258
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Entry
139322258 CDS
T11059
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139322258 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139322258 (COPA)
Membrane trafficking [BR:
pcae04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139322258 (COPA)
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139322258 (COPA)
Exosomal proteins of bladder cancer cells
139322258 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
139322258
NCBI-ProteinID:
XP_070807405
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESE
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRPSNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
RIAEIRKDMSGHYQNALYLGDLAERVRILKNCGQKSLAYLTAATHGLEEEAESLKETFDP
EKEVIPEIDPNARLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGEDGLAKGQEEGGGWDIEEDLDLPPELDVPAGPTG
EAEEGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVVTFEPYKQLFL
QTYARGRTTYQALPSLPSMYGYPHRNWKDAGVKNAVPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSVLLSVPLVVVDNKQEIAEAQQLIAICREYIVGLSMELERKKLPKDTLEE
QKRICEMAAYFTHANLQPVHMILVLRTALNLFFKLKNFKMAATFARRLLELGPKPEVAQQ
TRKILSACEKNPSDAHQLNYDMHNPFDICAASFRPIYRGKPVEKCPLSGACYSPEFRGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaaatcagcccgcgtgaaagggctgagcttccatcctaag
aggccttggatcctcacgagtttgcacaatggagtgatccagctctgggactatcggatg
tgcaccctcattgacaaattcgacgaacatgatggacctgtcagggggatcgatttccac
aagcaacagccgctcttcgtctctggaggggatgactataaaatcaaggtctggaattac
aaactgcgccgttgtctcttcactctgctggggcacctggattacatccgcaccaccttc
tttcaccacgaatatccctggatcctcagtgcgtccgatgaccagaccatccgggtgtgg
aactggcagtccagaacctgcgtttgcgtattgaccggacataaccattatgtgatgtgc
gcccagttccatccttctgaggacctggtcgtgtctgccagtttggaccagactgtgcga
gtttgggatatttctggtctaagaaagaagaatttatctcctggagctgtggagtccgag
gtccggggcatcaccggcgtggacctttttggcaccacggacgctgtggtgaagcacgtc
cttgagggacacgatcgtggagtcaactgggcggctttccaccccaccatgcccctcatt
gtctcgggggctgatgaccggcaagtcaagatctggaggatgaacgagtccaaagcctgg
gaggtggacacctgccgcggccattacaacaatgtttcctgcgccgtcttccaccctcgg
caggagctcatcctgagcaattcggaggacaagagcatccgagtctgggatatgtccaaa
cgaacgggcgttcagaccttccgcagggatcacgaccgcttctgggtgttggcagctcat
ccgaatctcaacctcttcgcggcaggtcacgacggagggatgatcgtcttcaagctggag
cgcgagaggccggcttacgccgtgcatggcaacatgctctactacgtcaaggaccgcttc
ctccgccagctggacttcaacagctccaaagatgtggccgtgatgcagttgagaagtggc
tccaagtttcccgtcttcaacatgtcctacaacccagctgagaatgctgtgctcctctgt
acgaggccgagcaacctggagaacagcacctacgacctctacaccattcccaaggatgcg
gattcccagaaccccgatgcaccggaagggaaacgctcctcggggctgacagccgtctgg
gtcgcccggaaccgctttgctgtcttggaccggatgcactcgatcctcatcaagaaccta
aagaacgaaatcacgaagaaggtccaggtgcccaactgcgatgagatcttctacgccggc
accgggaatctgttgctgagggatgccgattccatcactctcttcgatgtccagcagaaa
cggactctggcttcggttaagatctccaaggtgaaatacgtcatctggtcagcagacatg
tcccacgtggctctcctggcgaagcacgcgatcatgatctgcaaccggaaactggagtca
ctgtgcaacatccacgagaacatccgggtcaagagcggcgcctgggatgagagcggcgtc
ttcatttacaccacgagcaaccacatcaaatatgccgtcaccaccggggaccacgggatc
atccgcacgctggacctgcccatctatgtgacacgcgtgaagggcaacaatgtttactgc
ctcgaccgcgagtgccggccccgcgtcctcaccattgaccccacggagttcaagttcaag
ctggccctgatcaaccggaaatacgacgaggtcctgcacatggtgcgtaacgccaagctg
gtgggccagtccatcatcgcctacctgcagaagaagggctatcccgaagtggcgctgcat
ttcgtgaaggacgagaagacgcggttcagcctggctctggaatgcggcaacattgagatt
gctctggaggcggccaaagctctggacgacaagaactgctgggagaagctgggagaggtg
gctctgctccaagggaaccaccagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaagctctccttcctctacttgatcacgggcaatctggaaaagctgcgcaagatgatg
aggatcgccgaaatccggaaagacatgagcggccactaccagaatgccctctacctgggc
gaccttgccgaaagggtgaggatcctgaagaactgtgggcagaagtccctggcctacctc
acggctgctacccacggcctggaggaggaagcggagagcctgaaggagacctttgatccc
gagaaggaggtgatcccagagattgaccccaacgcccgcttgctccagccgccagctccc
atcatgcccttggacaccaactggcctctgctgaccgtctccaagggcttcttcgagggc
accatcgccagcaaaggcaaaggaggcgccctggcggccgacatcgatatcgacaccgtg
ggcaccgaaggctggggagaagatgccgagctgcagctggatgaagatggctttgtggat
gccggagaaggctttggcgaggacggcttggccaaaggccaggaggaaggaggcggatgg
gatattgaggaagacctggatcttcctccggaactggatgtccctgcaggtcccacgggc
gaagcggaagagggattcttcgtaccacccaccaaaggcaccagccctgcccaggtctgg
tgcaacaattcccaactgcccgtggatcacatcctggccggctcttttgagaccgccatg
aggctcctccatgaccaggtgggcgtggtcacattcgaaccctacaagcagctcttcctg
cagacctacgcccggggccgaaccacctaccaggctttgcccagcctgccctccatgtat
ggatatcctcatcgcaactggaaagatgccggggtgaaaaacgccgtcccggctgtgggc
ctgaagctgaacgatctgatccagcgcctgcagctctgctaccagctcaccacggccggc
aagtttgaggaggccgtggagaaattccgctccgtcctgctcagcgtcccgctggtggtg
gtggataacaagcaggagattgccgaggcccagcagctaattgccatctgccgggagtac
attgtggggctgtccatggagctggagaggaagaagctgcccaaggataccctggaggaa
cagaagcgcatttgtgagatggccgcctacttcacccacgccaacctacagcctgtccac
atgatcctggtccttcgaacggccctcaacctcttcttcaagctcaagaacttcaagatg
gccgccaccttcgctcgccgtctcttggagctcggccccaagcccgaagtggcccagcag
acccggaagatcctctcggcctgcgagaagaatcccagcgacgctcaccagctcaactac
gacatgcacaatccttttgacatctgtgctgcctccttccggcccatctaccggggcaaa
ccggtggagaagtgcccgctcagcggggcctgctattcgcccgagttccgtggccagatc
tgcagagtcacaactgtgacggaaatcggcaaagatgtcattggcttgaggattagccct
ctgcagttccgctga
DBGET
integrated database retrieval system
