Pituophis catenifer annectens (San Diego gophersnake): 139322269
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Entry
139322269 CDS
T11059
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04142
Lysosome
pcae04144
Endocytosis
pcae05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139322269 (CLTCL1)
04142 Lysosome
139322269 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139322269 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139322269 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139322269 (CLTCL1)
Membrane trafficking [BR:
pcae04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
139322269 (CLTCL1)
Exosome [BR:
pcae04147
]
Exosomal proteins
Proteins found in most exosomes
139322269 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
Gp18_dom_I
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
139322269
NCBI-ProteinID:
XP_070807417
LinkDB
All DBs
Position
Unknown
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIVDLSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGDSLPQKMFDRHASLAGCQIINYRTDENQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKVEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
ETIFVTSPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMATRSNLAGA
EELFARKFNTLFAQGSYAEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAADPTLALSVYL
RANVPNKVIQCFAETSQFQKIVLYAKKVGYTPDWIFLLRSVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSCVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWVSVL
EENNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLGRAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMAQKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQVAVDSARKANSTRTWKEVCFAC
VNGKEFRLAQICGLHIVIHADELEELISYYQGRGYFEELIGLLEAALGLERAHMGMFTEL
AILYSKYKPQKMREHLELFWSRVNIPKVLRAAEHAHLWGELVFLYDKYEEYDNAIITMMN
HPTDAWKEVQFKDIIAKVANVELYYRALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFA
KVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHKLIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
DKKECFAASLFTSYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFNKVDKL
DASESLRKDEEQVAEPTPIVFGQQLMLTAGPNAVPPQANFPYAYPTPPGFGQPPVYGFNM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctccccataagattccaggagcattttcagctccagaatcttggaatt
aacccagccaacatcgggttcagcacattaacgatggaatcggacaaattcatctgcatc
cgagagaaagtcggggagcaagcgcaggtggtcattgtcgacctgagcgatccaacgaca
cctatccggcgtcccatctcggcggaaagtgccattatgaatcctgcctccaaggtcatc
gctctgaaagcggggaaaaccctccagatctttaacatagagatgaaaagtaaaatgaaa
gcgcacaccatggccgaagaagtcattttctggaagtggatctcggtcaacaccgtggct
ttagtgacggagacggccgtctatcactggagcatggaaggagattctttgccccaaaag
atgtttgaccgacatgccagtcttgcgggctgccaaatcatcaactaccggacggatgag
aatcagaaatggttactcttaattggcatctctgcccagcaaaaccgcgtggtgggcgcc
atgcagctgtattccgtggatcgcaaagtctcccagcccatcgagggccacgcggcggcc
tttgccgaattcaaagtcgaaggaaacgccaaaccgtccaccctcttctgcttcgccgtc
cgcagccccgcaggaggcaagcttcatatcatcgaagtgggtcagcccgctgcgggaaac
cagcccttcgtcaaaaaagcggtggacgtctttttcccaccggaagcccagacggatttc
ccagttgcaatgcagattggaacaaagcacggcgtgatctacctgatcacaaaatacggc
tacatacacatgtacgatttggaatccggggtctgcatctacatgaaccgaatcagcgcc
gaaacgatattcgtaacatcgcctcacgaacctacctctgggattattggggtgaataaa
aaaggacaggtcctgtcagtttgcgtggaagaagacaatattgtaaactatgccaccaac
gtcctgcagaatccggacctgggtttgcgaatggctacccgaagcaacttagccggggcg
gaagaactctttgccagaaaatttaataccctttttgcacagggaagctatgcggaggcg
gctaaagtggcagcatctgcacctaagggcatcctgcgcaccagcgacaccatccggaag
tttcagagtgtcccggctcaacccgggcaagcatcgcccttactgcagtacttcggtatc
ctccttgaccaagggcagctcaacaaatttgaatctctggaactctgccgtcccgtcctt
cagcaaggccgcaagcagctgcttgagaaatggctgaaagaagacaagctggagtgctcc
gaagagctgggagacttggtgaaggccgctgacccaaccctcgccctgagtgtttatctc
cgtgcaaacgtcccaaataaagtcatccagtgttttgcagaaacgagtcagttccagaaa
attgttctttatgccaaaaaggtgggctatacccccgattggattttcttactgagaagt
gtcatgagagtcaacccagatcaaggccttcagtttgctcaaatgttggttcaggatgaa
gagcctttggccaacatcaaccagatcgtcgatgtgttcatggagaacagtttaattcag
cagtgtacttccttcctgctggatgccttgaagaacaatcgtcccgctgaaggccacctt
caaacccgtctgctcgagatgaatctcattcatgctccccaggttgccgacgccattttg
ggaaaccagatgttcacccactacgaccgagcccacattgctcagctgtgcgaaaaggcc
ggcctgctgcagagggctttggagcactacacggatctttacgacatcaagcgtgccgtc
gtgcatacccaccttctgaatcctgagtggttggtgaatttctttggctccctgtccgtt
gaagactctgtcgagtgcctgcgcgccatgttgtccgccaacatccgacaaaatctgcag
ctctgtgtccaggtggcttcgaagtatcacgaacaattgggcacccagtcccttgtggaa
ctcttcgagtccttcaaaagctacgaaggactcttttatttcttgggctctattgtcaac
ttcagccaggacccggacgtccattttaaatacatccaggcggcctgcaagaccggccaa
atcaaagaggtcgaaaggatttgccgcgaaagcaactgttacaatccagaacgagtgaaa
aatttcctgaaggaagccaagcttactgaccagcttcctttgattatcgtctgcgacaga
tttgattttgttcacgacttagttctttacttgtaccgcaacaacttacagaagtacatc
gagatatacgttcagaaggtcaaccccagccgcatccccgccgtcgtgggaggcctctta
gacgtggactgctcggaagacgtcattaagaacttgatcatggtggtgagaggtcagttt
tcgacagacgaactggtggcggaagtcgagaaaaggaacaggcttaagcttctcctgcct
tggctggagtctcggattcacgaaggctgcgaagagccagcaacacacaacgccctggcg
aaaatctacatcgacagcaacaacaaccccgagcgcttcctgcgggagaatcccttttac
gacagctgtgttgtcgggaagtattgtgaaaagagagaccctcacctggcctgtgtggct
tatgaaagggggcagtgtgacctcgagctcatcaaggtttgcaatgagaattctttattt
aagagtgaagctcgttacttggtgcgaagaaaagatccagaattgtgggtcagtgttttg
gaggagaacaaccccttcagaagacccctcattgatcaggttgtccagacggcgttatca
gaaactcaagaccccgaagaagtttctgtgacagtgaaagccttcatgaccgccgacctc
cccaatgaactgattgagctgctcgaaaagattgtcctggataattctgtcttcagcgag
cacaggaatctgcagaacctcttgatcttgacggccatcaaagccgaccgcactcgggtg
atggagtacatcaaccggctggataactacgatgctcccgatatcgccaacatcgccatc
agcaacgagctctacgaggaagccttcgccatcttcaggaagttcgacgtcaacacttcc
gctattcaggtgttgatagaacacatcggcaatctggaccgtgcctacgaatttgccgag
aggtgtaacgagccggccgtgtggagtcagctgggcagagcccagcttcagaaggatttg
gttaaggaagcgatcgattcttacataaaggccgacgatccttctgcctatatggaggtg
gtgcaggcggccaacagaaacgataactgggaggacctggtcaaattcctgcaaatggct
cagaagaaagccagagagtcttacgttgagaccgaactgatttttgccttagccaaaaca
aaccgactttcggagctagaagaatttgtcagcggccctaacaatgcacacatacagcag
gtcggcgaccgctgctacgaggaaggaatgtacgatgcggccaagctactctacaataac
gtgtccaattttgcgcgcctggcctccaccttggtgcacctcggggagtaccaagtagct
gtcgatagcgctcgcaaagccaacagcaccaggacgtggaaggaggtgtgtttcgcctgc
gtgaatggaaaggagttccgtcttgcgcagatatgcggcttgcacatcgtcattcacgcg
gatgaactcgaagaactgataagctactaccagggccgcggatacttcgaggaactgatc
ggtctcttggaagccgctctcggtctggaacgggcccacatgggaatgtttaccgaactt
gctattttatattccaaatataaaccccagaagatgagagaacatctggaactcttctgg
tccagagtcaatattccaaaggtccttcgagcagcagaacacgcccatctctggggagag
cttgtcttcctctacgataaatacgaagaatacgacaacgcaataattaccatgatgaac
catcccacggatgcttggaaggaagtacagttcaaggacatcatcgcaaaggttgccaac
gtggagttgtattacagagccctgcaattttatttggattacaaaccgcttctgatcaac
gatctcctcctcgtattatctccacggctggatcacaccaggactgtcagctttttcgcc
aaggttaatcaactacctcttgtgaaaccttatttgcgctcggtccagaatcacaacaac
aaaggggtcaacgaggcactgaacaaccttctgacagaggaggaagattaccaaggcctg
cgagcgtctatcgatgcctacgataacttcgataacatcaccttggctcagcgtctcgaa
aagcacaaattaattgagttccgacgcatcgccgcttatttgtacaaaggcaataaccgg
tggaagcagagcgtggaactttgcaagaaagatcggctttataaggatgccatgcaatac
gcggccgagtccaaagacgccgagctggctgagaagctccttcagtggttcctggaggaa
gacaagaaagagtgttttgcagcttctctcttcacgtcttacgacttgctgcatccggat
gtggtcctggagttggcatggcgacacaacattatggactttgcgatgccttacttcatt
caggtgatgagggagtaccttaccaaagttgatggtctgtttaataaggtggataaactt
gatgcttcggaaagtctaaggaaagacgaggagcaagtagcagaacctactcctatagta
tttggccagcaactgatgctgacggccggccccaacgccgttcctccccaggccaacttt
ccttacgcgtacccaacaccaccaggattcggccagccgccggtttacggattcaacatg
taa
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integrated database retrieval system
