Pituophis catenifer annectens (San Diego gophersnake): 139322282
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Entry
139322282 CDS
T11059
Symbol
MED13L
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139322282 (MED13L)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
139322282 (MED13L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
139322282
NCBI-ProteinID:
XP_070807434
LinkDB
All DBs
Position
Unknown
AA seq
2217 aa
AA seq
DB search
MTAAANGASLEDCHSNLFSLAELTGIKWRRYNFEGHGDCGPIISAPAQDDPILLSFIRCL
QANLLCVWRRDVKPNCKELWIFWWGDEPNLVDVIHHELHMIEEGFWENGLSYECRTLLFK
AIHNLLERCLMDKNFVRIGKWFIRPYEKNEKPINKSEHLSCAFTFFLHGESNVCTSVEIA
QHQPIYLISEEHLHMAQSSPMPFQVLISPYGLSGTLTGQAYKMSDPATRKLIEEWQYFYP
MVLKRKESVKEEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVSQSTSTPGSH
NSVAQQGAGTLKDTSSCGMLLTPPTSPEQTVIGDSGGIPTIVNHSAAPDGMITMQSPKKS
GKIPPKFQNCMVHRVWKECILNRTQSKRNPVPATNMEEDAPVSCVSWDFVDPAQRVPCSC
SRHKLLKQRCAVGSSRPPTISQPGFGGGTSSSSTLPPPTSKHKTTERQEKSEKVQKRLLL
PFHHRPSVTEDLCLEQDPSGQKLALAGVEPSLEAASNRKYEKQLSLPPRHPSKPANSNPM
DSPRSPISPLPPTLSPQPRGQESDTLDPSSDPGNPTLYSNGLELQPMASAEDRTVLVGQR
LPLMAEVSETALYCGIVHHQESSNKWQGYSLPLPSNLEFRPPELQCEIHDLKMDVALENS
PLKRFLAQPNKRFKIMEETLPVQAVNYLDPSPLIPQSGECLGDATDPYTFQDGDIKYSFT
GTKKCKLGTDRESLKKNKPEDGTAAKELTSGGHSTTMPDGKDAMSIFSSAPKTDTRQDNS
AGRAGSGSLTQVTDLAPSLHDLDNLFDNSDEDEPGAVSPPLRSSKLPPVGAEERHLSKDA
RTAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMSYKDGISSETVTTLGMMESPVVNMVAT
QLTEFKMEVEDGLGSPKPEEVKDFSFVHKVSMFQPFMGSSMFAPLKMLPSQCLLPLKVLE
ACVYRPSWAIPPKIEQLPLPPAAAFIRDGYNNIPSVGSLADQDYLQMNTPQMSTPVTLNS
TAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTP
STTRPLNSVEPGTVLPILEAHSLYVMLILSDSVLNIFKDSNFDSCCICACNMNIKGADVG
LYIPDSSKEDQYRCTCGFSAIMNRKLGYNSGLFIEDELDIFGRTSDIGQVAERRLMMCQN
TVIPQLGEGAKRVQEPPVSLLLLLQNQHTQPFTSLSCLDYMSVTSRPTLSYTSWSYDRVQ
AESHDSWNECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSSQDVVR
MLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLPIPTL
LVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLDGAKTFFRDLSAVY
EMCRLGQHKPISKVLHDGIMRVGKTVAQKLADELVSDWFNPPWGNEDCDNHSRLKLYAQV
CRHHLAPYLATLQLDSSLLTPPKHQPAPPSSSNVEQTISGNAGSVSSNSACLGPTAPSAG
TSFSSSTNGTTGLPLGTGTAPGSSVPQLLASSSSSSSSSSSSSISQTSTTSSSGFSGGLP
QGQNPTSGAVPSERPQGSTVPGGDAEAGQISTQQPQEGQDNSAERERIGIPTEPESADSH
AYPPAVVIYMVDPFTYTTEEESSSASFWLLSLMRCYTEMLDNLPENMRSSFILQIVPCQY
MLQTMKDEQIFYIQHLKSLAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNSERPS
PIQLYSPPFILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGDLL
ETCIVNIDLPNRSRRCKVSARKIGLQKLWEWCIGIIQMTSLPWRVVIGRLGRLGHGELKD
WSILLGECSLQTISKQLKEVCRMCGISSADSPSILSACLVAMEPQGSFVVMPDAVTMGSV
FGRSTALNLQSSQLNTPQDASCTHILVFPTSATIQVAPANYPNEDGFSPNNDDMFDLPFP
DDMDNDIGILMTGNLHSSPNSSPVPSPGSPGIGVGPSFQHSRSQGERLLXREAPEELKQQ
PLALGYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKVALHHHISVAQTDELLPVRTXQRV
PHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRGSCLPVHFVVLTQLYNAIMNIL
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcggcgaacggggcgagcctggaggactgtcactccaacctcttctcgctg
gcggaactgacaggcatcaagtggcgtaggtacaacttcgaaggtcatggagactgtgga
cctattatctcagcccctgctcaagatgacccaattctcttgagtttcatccgatgtttg
caagccaatctcttgtgtgtctggcgccgtgatgtcaaaccgaattgtaaggagctatgg
atattttggtggggagacgaaccgaacctggtagatgtaatacaccatgagctacacatg
atcgaagagggattttgggagaacgggctttcgtacgaatgcaggacgctgcttttcaag
gcaatccacaatctgttggaaagatgcctgatggacaaaaactttgtcaggatcgggaag
tggttcatccgtccatacgaaaaaaatgagaagcctattaacaaaagtgagcatttgtcc
tgcgccttcacattcttcctccacggggaaagcaacgtgtgcacaagtgtggagatcgca
cagcaccaaccgatctaccttatcagcgaggagcacctacacatggcccagtcatctccc
atgccttttcaagtgttgatcagtccgtacggcttaagtggtactttaacaggccaagct
tacaagatgtccgacccggcgacccggaagctaattgaagaatggcagtatttttatccc
atggtgctgaagaggaaggagagcgtgaaagaggaagaggagctgggatacgacgatgac
tttcccgtggccgtagaagtcattgttggtggtgtccgaatggtatacccttctgccttt
gttcttatctctcaaaacgacattcccgtgtctcagagcacttccacgccaggaagccac
aacagcgtggcacaacaaggagctggaaccttgaaagacaccagcagttgtggaatgttg
ctcaccccacccacttctccggaacagaccgtcataggtgacagtggaggcattccaacc
atcgtcaatcattcagccgcaccagatggaatgatcactatgcagagtcccaaaaaatcg
gggaagatcccgcccaaatttcagaactgtatggtccaccgagtttggaaagaatgcatc
ctcaataggacacagtccaaaaggaatcccgttcctgctaccaatatggaggaagatgcc
cccgtcagctgtgtttcttgggattttgtggatccagcccaaagagtcccctgctcttgt
tccaggcacaaactcctgaagcaacgctgtgctgtcggctccagtcgtccgcccacgata
tcacagccggggttcggagggggaacctcctcctcttccactttaccccctcctacctct
aagcacaaaactaccgagaggcaggagaaatcggagaaagttcagaagaggttgttgctg
ccatttcatcatcgtccctcggtgaccgaagacctgtgcctggagcaggacccttcggga
cagaagctggccttggccggagtggaaccttccttagaagctgcgagtaataggaagtac
gagaagcagctgtccctgcctccccgacacccgagcaagccagccaattcgaatcctatg
gattctccccgttcccccatatctcctctgcctccgaccctcagcccccagcccagggga
caggaatccgacactttggatccgtcgtccgatcctggcaacccgaccctctacagcaat
ggattagaacttcagcccatggccagcgcggaggatcggacggtcctcgtgggtcaaagg
ttgcctctgatggccgaagtcagcgagacagctttgtactgcgggatcgtacaccaccag
gagtcatccaacaaatggcagggatattctcttcctctccccagcaatctagaattcagg
cctccggaactccagtgtgagatccacgacctcaagatggacgtggccttggaaaacagt
ccgctgaaaaggttcttagcacagcctaataaaagatttaaaatcatggaggagacccta
cctgttcaagcagtgaattatctggacccctcaccgctaattcctcaatctggtgaatgc
ttgggagatgccactgatccatacacgtttcaggacggggacatcaaatacagcttcact
ggcactaaaaaatgcaaacttgggactgacagagaatctctgaagaagaataagccggaa
gacggaactgcagctaaagagctaacttcaggaggccattcaaccaccatgccagatggg
aaagatgcaatgtccatcttcagttctgcacctaagacagatacgcggcaagataattcg
gctggccgagctggttctggtagcttaacacaagttactgacttggccccttctcttcat
gatttggataatctcttcgataattcagatgaagatgagcctggtgctgtctccccccca
ctccgatcatcaaaattgccaccggtgggagctgaagagcggcatctaagcaaggatgca
aggacagcagttccttatcccccgaccgttgcagacctgcagcgaatgttccccaccccg
ccttccttggagcagcacccggctttttcacctgtcatgagctacaaagacggcatcagc
tcagagaccgtcaccacgctggggatgatggaaagcccggtggtcaacatggttgcgact
caactcaccgagtttaaaatggaagtagaagatggtttgggcagtccgaagccggaagaa
gtcaaggatttttccttcgtgcacaaggtatccatgtttcagccctttatgggttcttcc
atgtttgccccgctgaagatgctgcccagccagtgcctgctcccactgaaagtcctcgaa
gcctgcgtctatcggccttcgtgggctattcctcccaaaatagagcaacttcctttgcca
cctgcagccgctttcatccgggatggttacaacaacatacccagcgtcggaagcctggcc
gatcaagactaccttcaaatgaacactccgcaaatgagcactccggtcacgctaaatagc
accgcgcctgccagtaacagcggggcaggggtcttgccgtccccggccacccctcgcttc
tctgtcccgaccccacgcacacccaggactccacggactccgagaggtgggggcacagcc
agcgggcaagggtctgtcaaatacgacagcacggaccaaggctcgccagcttccacgcct
tccaccactcggcccctcaattctgtggaaccgggcaccgtcctgcccatcctggaagcc
cacagcctttacgtcatgcttatcctctccgactccgtgctgaacattttcaaggatagc
aacttcgacagctgctgcatatgcgcctgcaacatgaacatcaaaggcgccgacgtcggg
ctgtacatccccgactcgtcgaaagaggaccaatatcgctgcacttgtgggttcagcgcg
atcatgaaccgcaagctagggtacaactcgggcctcttcattgaggacgagttagatatt
ttcggcaggacttcagacatcggccaagtggccgaaaggaggctgatgatgtgtcagaac
accgtaatccctcagctgggagaaggcgccaaaagggtccaggagccgcccgtgagcctc
ctcctcctccttcaaaatcagcacacccaacctttcacctccctgagctgcttggactac
atgtctgtcacaagtcggccgacgctgtcttacacgagctggagttacgatagggttcag
gctgagagccacgactcctggaacgagtgctttaacgccctggagcaaggccgccagtat
gtggacaaccccacaggcggcaaagtggacgaagctcttgtccgaagcgctaccgttcac
tcttggcctcacagcaacgtcctggacatcagcatgctttcctcccaagacgtggtgcgg
atgcttctctcccttcagcctttcctgcaagatgccattcagaagaagaggactggcagg
acctgggagaacatccagcatgttcaagggcccctcacctggcagcaattccataaaatg
gcaggacggggaacttacggttccgaagagtcgcctgagcctctcccgatacccaccttg
ttggttggctatgacaaggacttcctgacaatctctccgttctccctgccattctgggag
aggctgctcttagatccttacgggggtcaccgcgatgtcgcctacatcgtggtgtgtcca
gaaaacgaggccttgcttgacggagccaaaactttcttcagggacttaagcgccgtatat
gagatgtgtcggcttggtcaacacaaacccatctctaaagtgttgcacgatgggatcatg
cgcgtgggaaagacggtggcccagaagctggccgatgagcttgtgagcgactggttcaac
ccaccctggggcaacgaagattgtgacaatcattccaggctcaaactttatgcgcaagtt
tgtcgtcaccacctagcaccttacttagctaccttgcaacttgatagcagtctgctgacg
ccacccaagcaccaaccggcacctccatcgtcatccaacgtggaacaaaccatatccggg
aacgcaggatcggtttcctccaactcggcctgtcttggacctacggctccttcggctggc
acatctttcagctcctcaacgaatgggaccactggtctcccgttgggcaccggtacagcc
ccaggctcttcggtgccccagctcttggcctcctcctcttcctcctcctcttcctcctcc
tcctccagtattagccagacaagtactacctcctcttcagggttcagcggaggcctacct
caaggtcaaaacccaacatccggggcagttccctcagagagaccccaaggaagcacagtc
ccaggaggagatgccgaggcagggcagatctcaacgcagcaaccccaagaagggcaggac
aactctgcagagagggagaggataggaatccccacggaacctgagtctgcggacagccat
gcctacccaccggctgtggtcatctacatggtggatcccttcacctacaccacggaagag
gaatcttcttctgccagtttctggctgttgagcttgatgcgctgttacacagaaatgttg
gacaacctccctgaaaacatgaggagctctttcattcttcagattgtgccttgccaatat
atgctgcagaccatgaaggacgagcagatcttttatatccagcacttgaaatccctggca
ttttccgtctactgccagtgcaggcgaccgctacccacccagattcacatcaagtccctg
accggtttcggaccagctgccagcattgagatgacgctcaagaactcagagcggccgagt
cccattcagctgtactcccctccatttatcctggcacctatcaaagacaagcagacggag
ctcggggagacctttggcgaagcaagtcagaagtataacgtgctctttgtggggtattgt
ctctctcacgaccagcgttggcttctggcctcctgcaccgacctgcacggggacttgttg
gaaacctgcattgtcaacattgatttgccaaacagatcacggagatgcaaggtgtcagcc
cgtaaaattggcttgcagaagctatgggaatggtgcatcgggatcatccagatgacgtcc
cttccctggagagtcgtgattgggcgccttggacggcttggccacggggaactgaaagac
tggagcattctgctgggagagtgctccctgcagacaatcagtaagcagctgaaggaggtc
tgtcggatgtgtggcatctcctctgcggattctccctccatcctcagcgcctgcttggtt
gccatggagccacaggggtcattcgtggtgatgccagatgccgtcaccatgggttccgtc
ttcggccggagcactgcccttaatctgcagtcttcacaactgaacactccccaggatgcc
tcctgcactcacatcctggttttcccaacctcggcaaccatccaggtggctcctgcaaat
tatcccaatgaagatggattcagccctaataatgatgacatgtttgatctcccattcccg
gatgacatggacaatgacattggcatcctgatgactgggaaccttcactcctctccaaac
tcttcccctgtcccctcccctggttctcccggaattggggtaggaccatcctttcagcac
agccggagccaaggggagcgtctccttntccgggaagcccccgaagaactgaagcagcag
cccctcgccctgggttacttcgtttccactgccaaagccgagaacctccctcagtggttc
tggtcctcctgtcctcaagctcagaaccagtgtcccctctttctcaaggttgccctgcat
catcacatctctgtagctcagacagatgaactccttcctgtccggactntccagagagtt
ccccaccccttggactccaaaaccacttcagatgtcctaaggttcgtcctggaacaatac
aacgcattgtcatggctgacttgtaatccggcgacccaggatcgcggctcttgccttccc
gttcactttgtggtgctcacccagctctacaacgccatcatgaacatcctctaa
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integrated database retrieval system
