Pituophis catenifer annectens (San Diego gophersnake): 139322290
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Entry
139322290 CDS
T11059
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03030
DNA replication
pcae03410
Base excision repair
pcae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139322290 (POLE)
03410 Base excision repair
139322290 (POLE)
03420 Nucleotide excision repair
139322290 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcae03032
]
139322290 (POLE)
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139322290 (POLE)
Enzymes [BR:
pcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
139322290 (POLE)
DNA replication proteins [BR:
pcae03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
139322290 (POLE)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
139322290 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
DNA_pol_B
zf-DPOE
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
139322290
NCBI-ProteinID:
XP_070807445
LinkDB
All DBs
Position
Unknown
AA seq
2301 aa
AA seq
DB search
MALRRGRGGRGGGGGGWRRRWAAEPPAEDGERETPRDEGSSSVSALRRLERSQWTDKIDA
LFGFERMKEPAERTGWLINMHPTEILDEDKRLVSAVDYYFIQEDGSRFKVALPYRPYFYI
AAQKGCDREVSSFLSKKFQGKIAKLEIVPKEDLDLPNHLVGLKRSYIKLSFNTVDDLIKV
RREITPAVKKNRERDQALDTYTTLLTSALTGHSLNHEEEPSKKTADQMDNIIDMREYDVP
YHIRLSIDLKIHVAHWYNVHHRGSSFPPEIIRRDDMVERPDPVVLAFDIETTKLPLKFPD
AETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRW
FEHVQETKPTIMVTYNGDFFDWPFVEARAAVHGLNMQQEIGFQKDGQGEYKSSQCIHMDC
LRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMAIEESQTLATYSVSDAVATY
YMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQEFNKL
TEDGHVLDSETYIGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTLRHAIEEEEG
IPLEQVTNFQEVCEEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVD
EATCAACDFNKPSASCQRKMTWQWRGEFMPASRSEFHRIQQQLESEKFPALFPNGPPRAF
HELSREDQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYE
FKGLHKVWKKKLAAATEMADASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWY
SMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTHSKKPK
VTISYPGAMLNIMVKEGFTNNQYQELVDPASLKYVSRSENSIFFEVDGPYLAMILPASKE
EGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLNGTTLEEVYASVA
KVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQ
MVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAELSVRKHYLRKWLKSPSLQDFDIRTI
LDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKISELF
VSEGKRQVSTNFPSENTPNSQVADMEDFGVAKPVQPVPPMSSKRKRTPTAEESQQQSQAL
ELTQSWREILGPPPPVGTTKEERLLWLRYHKKKWELQARQRQERRKKRRLADGEAAPGGG
AIRAGPSKGLSNFLRKTARSILDMPWQIVQIAESGQPGLFKLWAVIGSDLYCLKLNVPRI
FYINQRVPKPEESTVYKKVNRILPRSSLAFHLYEYSVPEDMYLEHVNEINASLSAPDIEG
VYETQVPLLLRALIHLGCVCMVNKHLVRHLSGREAETFDLEHLERQSLAQFSYLEPGSIR
HIYLYHHSQGSKALLGLFIPSQRKASIFVLDTVRSNQMPNLNNLYSAEHASMVEKVGREL
LPPDKHLFEVRAETDLKSICRVLQRLLMGYKDERRGPTLVAVQSNWDLKRLAGAMPVLEE
FPLVPVHVTDDINYSILDWQRHGARHLIRHYLKLDMCLSQAFDMSRYYHLPVGNLPDDVS
IFGTDLFFSRHLHRHNHLLWLSPTSRPDMGGKEADDSRLVMEFDERASVEINHPGCYSTV
CVELDLQNLAVNTILQSHRINDMEGASSLCISFDVIQQASLEDMVTGNQAASVPASYDEA
ALCSNTFRILKSLVVGWVKEITQYHNVYADNQVIHFYRWLRSPTSLLYDPALHRMLHGMM
KKLFLQLVAEFKRLGSVVIYANFNRIILCTKKRHIEDALAYVEYITHSIHSKELFHSLAI
SFSCCWEFLLWMDPTNYGGIKGKVPTETHCEEATRSKQTAEVANDEEEEEEEEEEEEQEG
NLGENSIENRLENNWNIMQYLPQAASCQNYFLMIVSAYIVAVHHSIKEEMQRNISGGTPV
RRRTSSQTSQEAVGETGTMPGAIAFSQEYVSNELTQSFFTITQKIQKKVTGSRHTTELSE
IFPSLPGSHLTLNNPALEFIKHVCQVLSLDANIANQVQKLKRDLLRLIDVGEFSEEANFH
DPCRSYVLPEVICRNCNFCRDLDLCKDPALFQDNSLLPSWLCSSCQSQYDSDAIEMALVE
ALQKKLMAFTLQDLVCLKCKGIKDTHMPVYCSCAGDFDLLLPTKNFLDHLKVFQGIARHY
GMTHLLENIQWLLQMNPQLLS
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaggagaggccgaggaggaagaggaggaggaggcggcggctggaggcgccgg
tgggctgcggagcccccggcagaagacggcgagagggagacccctcgggatgagggttcc
tcctccgtctcggcgcttcggcgtttagagcgcagccagtggacggacaaaatcgatgcg
ctgtttgggtttgagaggatgaaggagcccgcggaaaggacgggatggctgatcaacatg
cacccgacggagattttggatgaagataaacgcttggtcagtgctgtggattattatttc
attcaggaggatggaagtagatttaaggtggctttgccctatagaccatacttctacatt
gcagcccaaaagggttgtgaccgagaagtatcatccttcctttccaagaaattccagggg
aaaatagcaaaattggaaatcgtacccaaagaggatctggacttgcccaatcacctggtt
ggcctgaaacgaagttatatcaagctttctttcaacaccgtggatgacctgataaaagtc
cgcagggagattacccctgcggtcaagaagaacagagaacgggaccaagctttggacact
tacaccaccctgctgactagtgctctcactgggcacagtctgaaccatgaggaggagccc
tccaagaagaccgcagaccagatggacaacatcatagatatgcgggaatatgacgtgccc
taccacatccgtctgtccatcgatctgaagattcacgtggctcactggtacaacgttcac
caccggggcagcagttttcctcctgagattattcgacgggatgacatggtggaacggccc
gatcctgtggttcttgcctttgacattgagactacaaaactccctttaaaatttcctgat
gcagaaacggaccagatcatgatgatctcctacatgattgatggccagggctacttgatc
acaaaccgggagattgtctcggaagacatagaagacttcgaattcactcccaaacccgag
tatgagggtccattctgcgtattcaatgaacctgatgaggctcatcttatccagcggtgg
tttgaacacgttcaagaaaccaaaccaactatcatggtgacctacaacggagacttcttt
gactggccgtttgtggaagccagagcagccgttcatgggctgaatatgcagcaggagatt
gggttccaaaaggacggccagggagaatacaaatcctcgcagtgcatccacatggattgt
cttcggtgggtgaagagggacagttacctcccagtgggcagccacaacttaaaagcagca
gccaaagcgaagttgggttacgaccccgtagagctagaccctgaagagatgtgtcggatg
gcgattgaagagtctcagactttggccacctattcagtgtcagatgctgttgccacctac
tacatgtacatgaagtacgtgcaccctttcatctttgccttgtgtacaatcatcccgatg
gagcctgacgaggtgctccggaaaggctctggaaccttgtgcgaggcgctgcttatggtc
caagcctaccatgccaacatcgtcttccccaacaagcaagagcaggagttcaacaagctt
acggaggatgggcacgtgctcgactcggagacctacattgggggccacgtggaggccctg
gagtcgggggtctttcgcagtgatatcccctgccgctttaaaatgaatccggctgccttt
gacttccttctgcagcgcgtggagaagacactccgccatgccatcgaggaagaggagggg
attcccttagagcaggtcaccaatttccaagaggtttgtgaagaaatcaaagttaaactg
aattccctgaaggacgttcccaacagaatcgaatgtcctctcatttaccatctggatgtg
ggagccatgtatccaaacatcatcttgaccaataggctgcagccctcggctatcgtggac
gaggcaacctgtgccgcttgtgatttcaacaagcccagcgccagctgtcaacggaaaatg
acctggcaatggaggggagaattcatgccagcgagccggagcgaattccaccgcatccag
caacaattggaatcggagaagtttcctgctcttttcccaaatgggcctccccgggcgttt
cacgaactgtcccgagaagatcaagccaaatacgaaaagaagcgattggctgattattgc
cgcaaagcttacaagaagatccatgtgacaaaagtggaagaacgcgtcactactatttgt
cagcgagagaactccttctacgtagacacggtccgggcttttcgagatcgtcgctatgag
tttaaaggattacataaggtgtggaagaagaagctggcagctgccactgaaatggccgat
gcctccgaagtgaagcgttgcaagaacatggagatcttatatgactccctgcagctggca
cacaagtgcatcctcaactctttctatggctacgtcatgcgcaaaggggcccgctggtat
tctatggaaatggctggcattgtctgcttcactggcgccaacatcatcactcaggccagg
gaactgattgagcagattgggagacccttggagcttgacacagatgggatatggtgcgtg
cttccaaacagctttccagagaactttgtcatcaagtcaacccattccaagaaacccaag
gtgaccatctcgtatccgggggccatgctgaacatcatggtgaaggagggttttaccaac
aaccagtaccaagagctggtggacccagcatccctcaagtatgtttcccgctccgaaaat
agcatcttttttgaagtagacgggccctatctggctatgattcttccagcctccaaggag
gaaggcaagaagctgaagaaaagatacgctgtgttcaatgaagatggttccctggctgaa
ctgaagggctttgaagtgaagagacgaggagagctgcagttggtgaagatcttccagtcg
tcggtctttgaggccttcctgaacggaacgaccctggaggaggtctacgcttcggtcgcc
aaagtagccgattactggctcgatgtcctgtacagcaaggcagccaacatgcccgattcc
gagctgtttgagttgatctcggagaatcgatccatgtctcggaagctggaggattacgga
gagcaaaaatccacgtccatcagcacagccaagcgcctggcggagtttcttggggaccag
atggtgaaggacgctggcctgagctgtcggtttatcatctccaagaaaccggaaggctcg
ccagttacagagagagccatcccactcgccattttccaagccgagctctcggtgcgcaag
cattacctccggaagtggctcaaaagcccttcgctgcaggattttgatatccgaacgatc
ctagactgggattattacatcgaaagattgggcagcacgatccaaaagattatcaccatc
ccggcagcactgcaacaggtgaagaatccggtgccccgtgtccgtcaccctgattggctg
cacaagaagctgctggagaaaaacgacgtgtacaagcagaaaaaaatcagcgagctcttt
gtcagcgaaggcaaaagacaggtctccactaatttccccagtgagaatactccaaatagt
caggtggccgatatggaagattttggggtcgccaaacctgtgcagccagtgccccccatg
tcaagcaagcgtaaacgaacccccaccgcagaggagagccagcagcagtcccaagctctg
gagctcacccaatcctggagggagatcctgggacccccaccgcccgttggcaccactaag
gaggaacggctgctctggctgcgttaccataagaaaaagtgggagctgcaggcccgtcaa
cgccaggaacgccggaagaagcggaggctggccgacggagaagcagccccggggggcgga
gcgattcgggctgggccctccaagggcctgagcaatttcctgcgcaagaccgcacggagt
atccttgacatgccttggcagatagtccagattgctgagagtggccagccaggtctcttc
aagctatgggctgtgattgggagcgatctctactgcctcaaactgaacgtcccacgtatc
ttctatatcaaccagcgcgttcctaaacccgaagagagcacggtttacaaaaaggtgaat
cgaattcttcctcgttccagcttggccttccacctgtacgagtactccgtgcccgaagac
atgtacctggagcacgtcaatgagatcaacgccagcctctctgctccagacatcgagggg
gtttacgagacccaggtgccgttactcctgcgggccctgattcacctaggctgtgtctgc
atggtgaataagcatttggtgaggcacctgagtggccgggaagctgagacctttgacctg
gagcacctggagaggcagtctctggcacagttcagctacctggagccagggagtatccgg
cacatctacctctatcatcactcccagggcagcaaggcgttgcttggcctcttcatccct
tcccaacgcaaagcttccatctttgtgcttgatacagtgcgtagtaaccagatgccaaac
ctcaacaacctgtattctgctgagcacgcttccatggtggagaaggtgggccgagagctg
ctccccccggacaagcacctctttgaagtccgagccgaaacggacctcaagagcatctgc
agagtgctccagcgcctcctgatgggctacaaggatgaacgccggggcccaacgctcgtt
gctgtgcagtctaactgggatttgaagcggttggccggtgccatgcccgttctggaggag
ttccccctggttcctgtccacgtgacggacgacatcaactacagcatattggactggcag
cgccatggtgctcgccacttgatccgccactacctcaaactggacatgtgtctgtctcag
gcctttgacatgagcaggtattaccacctgcctgtcgggaaccttccggatgacgtctcc
atctttggcacggacctttttttctctcgccatctccatcgccacaatcacctcctttgg
ctctcgcccacctcccgcccggacatggggggcaaggaggcagatgatagccgtctggtc
atggagttcgatgaaagggcctccgtggagatcaaccatccgggctgctattccacagtc
tgcgtggagctggacctccaaaacctggctgtgaacaccatcctgcagtcccatcgcatc
aacgacatggaaggggcctccagcctctgcatcagcttcgacgtcatccagcaggcatcg
ctggaggacatggtcacgggcaaccaggcggccagcgtccccgccagctacgacgaggcc
gcgctctgctccaacactttcaggatcttgaagagtctggtggtgggctgggtgaaggag
atcacgcagtaccacaatgtctatgctgacaaccaggtgatccacttctaccgctggctg
cgatccccgacttccctgctctacgatcctgccttgcaccgaatgctccacggcatgatg
aagaagctcttcctgcagttggtggcagaattcaagcggctcggctccgtggtcatttac
gccaatttcaaccgtatcattctgtgcaccaagaagcgccatatcgaagatgccctggcc
tacgtcgagtacatcacccacagcatccattcaaaagaactcttccactcgctggccatt
tccttttcctgctgctgggagtttttgctgtggatggaccccaccaattatggggggatc
aagggcaaagtaccgactgagacccactgtgaagaggcgacgaggagtaaacagacagca
gaggtagccaacgatgaagaagaggaggaggaggaagaagaagaagaggaacaagaaggc
aacctaggagaaaacagcatagagaaccgtctggaaaacaactggaacatcatgcagtat
ttgccacaggcagcttcctgtcagaattacttccttatgattgtgtccgcctacatcgtg
gctgttcaccacagcatcaaggaggaaatgcagcggaacatctccggaggcactccggtc
aggaggcgaaccagcagccaaacctcccaggaagctgtaggggagacgggcaccatgcca
ggcgccatcgctttctcgcaggagtacgtctccaacgagctgacccaaagctttttcacc
atcactcagaagatccaaaagaaagtcacggggtctcgccacaccacagagctctccgaa
atatttccctccctgcctggctcacatctgacgctcaacaatccggcgctggagttcatc
aagcacgtctgtcaggtgctgtctctggatgccaacatcgccaaccaagtgcagaagctg
aagcgggacctcctgcgtctcatcgacgtgggggaattctccgaggaggccaacttccac
gatccctgccgctcctacgtcctcccggaggtcatctgtagaaactgcaacttttgcagg
gacctggatctctgcaaggatcctgctctctttcaggacaactctctgctgcccagctgg
ctgtgctccagttgccagtctcagtacgattccgacgccatcgagatggccctggtggaa
gccctgcagaagaagctgatggccttcaccctgcaagacctggtgtgcttgaaatgcaaa
ggtattaaggatactcacatgcccgtctactgcagttgtgctggggacttcgacctcctg
ctccccaccaagaacttcctggatcatttgaaggttttccagggcatcgctcgacattac
ggaatgacccacttgctggagaacattcagtggctgcttcagatgaatcctcagcttctc
tcctga
DBGET
integrated database retrieval system
