Pituophis catenifer annectens (San Diego gophersnake): 139322324
Help
Entry
139322324 CDS
T11059
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139322324 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcae02000
]
139322324 (SLC6A4)
Transporters [BR:
pcae02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139322324 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
139322324
NCBI-ProteinID:
XP_070807504
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAVFGGVPLFYMELALGQFHRVGAIPIWKNICPIFKGIGFAICVINLYVAFYYNTIIAWA
LFYFCSSFARTLPWASCSNPWNTPSCLSYFEAGNVSWTNLSKSPAEEFYMRHVLQVQNSH
GLSDVGEIRWQLLLCLFLIFTTVYFSLWKGVKTSGKVVWVTATLPYIVLLILLIRGATLP
GAWRGIVFYLQPDWQKLRSMPVWVDAAAQVFFSLGPGFGVLLALASYNPFNNNCYRDAIV
TSLVNCFTSFLSGFVIFTVLGYMAEMRHMDVADVAKDKGPSLLFITYPEALANMTGSSFF
AILFFLMMVTLGLDSTFGGLEAVITALMDEYPQVLGEHRQLFVLGLITLCFLGSLATLTN
GGPYIVKLLEEFGAGCSILAVVFLEAIAVSWFYGMQQFCSDVKAMLGFGPGLYWQVCWRV
VSPATLAFILISSLLDQPPLVLFDYEYPVWSIRLGHLIGVSSFLCIPIYMVYKLVWTPGS
LKQRLALCLRPEKIARELTLEMVDVPAPL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcttcggaggggtgccccttttctacatggagctggctctggggcaattccat
cgggtcggagccatacccatctggaagaacatctgtcccatctttaaaggcattggcttc
gccatctgcgttatcaacctgtacgtggccttctactacaacaccatcattgcttgggcc
ctcttctacttctgctcctcctttgcccgtaccctgccctgggccagctgcagcaacccc
tggaacacccccagctgcctcagctacttcgaggctggcaacgtgtcctggaccaacctc
tccaagtcccccgctgaggagttttacatgaggcacgtcctgcaggtgcagaattcacac
ggactgtctgatgtgggcgagatccgttggcagctgctgctctgcctcttcctgatcttc
accactgtctacttcagcctctggaaaggggtcaagacctcagggaaggtggtttgggtg
acagccaccctgccctacatcgtcctgctcatcctgctgatccgtggggcaaccctcccg
ggggcctggagggggattgtcttctacctacaaccggactggcagaagctgaggagcatg
cccgtgtgggtggacgcagctgcccaggtcttcttctctctggggccgggattcggggtc
ctccttgccttggccagttacaacccgttcaacaacaactgttaccgagacgccatcgtg
accagcctggtcaactgcttcaccagtttcctctcgggatttgtcattttcactgtcctg
ggctatatggccgaaatgcggcacatggatgttgcggacgtagcaaaggacaaagggccc
agcctcctcttcattacttacccggaagcccttgccaacatgaccggatcttccttcttc
gccatcctcttcttcctcatgatggtcacgctgggattggacagcacgtttgggggcctg
gaagccgtgatcactgccctgatggacgagtatccccaagtgctgggcgagcaccgtcag
ctgttcgtgctgggactcatcaccctctgcttcctgggctccctggccacgctgaccaat
ggaggcccctacattgtgaaactcctggaagagtttggggctggttgctccatcttagct
gtggttttcctggaagccattgccgtctcctggttctacggaatgcagcagttctgcagc
gacgtgaaggccatgctgggctttgggccagggctgtactggcaagtgtgctggagagtg
gtcagtccggccaccttagcgttcattctcatcagctccctcctggaccagccccccctc
gtgctctttgactacgagtatcctgtgtggagcatcaggctgggacacctgattggggtc
tcctccttcctctgcattcccatctacatggtctacaagctggtctggacccccggatct
ctgaagcagcgccttgccctgtgtcttcggccagagaagattgcccgggagctgaccctc
gagatggtggacgtgccagcccccctttaa
DBGET
integrated database retrieval system
