KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139322362
Entry
139322362         CDS       T11059                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein Rab-1B-like
  KO
K07874  Ras-related protein Rab-1A
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139322362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcae04131]
    139322362
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcae04147]
    139322362
   04031 GTP-binding proteins [BR:pcae04031]
    139322362
Membrane trafficking [BR:pcae04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    139322362
 Autophagy
  Other autophagy associated proteins
    139322362
Exosome [BR:pcae04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139322362
  Exosomal proteins of other body fluids (saliva and urine)
   139322362
  Exosomal proteins of colorectal cancer cells
   139322362
GTP-binding proteins [BR:pcae04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    139322362
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB FeoB_N AAA AAA_7 ABC_tran PduV-EutP AAA_22 AAA_29 Septin AAA_5 AAA_16 DUF6974 CRAL_TRIO_2 TniB Dioxygenase_N
Other DBs
NCBI-GeneID: 139322362
NCBI-ProteinID: XP_070807563
LinkDB
Position
Unknown
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLSIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG
GDRPNLRIDSTPVKQGGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaaccccgaatatgattacctgttcaagttgcttctgatcggagattccggtgtcggg
aaatcctgcctcttgctacggttcgccgatgacacctacacagaaagctacatcagcacc
atcggggttgacttcaaaatccggaccattgaactggacggcaaaaccattaagctgcag
atttgggacacagctgggcaggaacggttccggactatcacgtccagctactaccgaggg
gcccacggcatcatcgtggtctacgacgtaacggatcaggaatcgtacaacaacgtcaag
cagtggctgcaggagattgagcgttacgccagcgagaacgtcaacaagctgctcgtcggc
aacaagtgtgacttaaccacaaagaaggtggtggactacacaaccgccaaggagtttgcc
gactcgctgagcatccccttcctggagacgagtgccaagaacgccaccaacgtggagcag
tcgttcatgaccatggcggccgagatcaagaaacggatgggccccggggccacggccggc
ggggaccggcccaacttgagaatcgacagcactccggtcaaacaaggaggaggcggctgt
tgctga

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