Pituophis catenifer annectens (San Diego gophersnake): 139322406
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Entry
139322406 CDS
T11059
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04510
Focal adhesion
pcae04512
ECM-receptor interaction
pcae04810
Regulation of actin cytoskeleton
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139322406 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139322406 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
139322406 (ITGA10)
04810 Regulation of actin cytoskeleton
139322406 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139322406 (ITGA10)
Cell adhesion molecules [BR:
pcae04515
]
Integrins
Integrin alpha subunits
139322406 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
VWA_2
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
HisK_sensor
vWA-TerF-like
BssB_TutG
Motif
Other DBs
NCBI-GeneID:
139322406
NCBI-ProteinID:
XP_070807606
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MAVKAYSPHASFGLSRIIPFNIDVRRPQIFRGPRETQFGYKVLQFTAQGQKWMLVGAPWD
GTEGDRKGDVYKCIVEERKNSTCTKVNIGDMSLRNVSRQIKNMHFGMTLIANKDDGFVAC
APLWSQECGTSLYSIGMCTSLDKDFRLMENLAPTAQRCSTYMDIVIVLDGSNSIYPWYEV
QNFLSNILSKFFIDPEQIQVGVLQYSEVAVHEWTLKDYKTAEEVIEAAQNISRQEGLETR
TASAIHKACTEAFSPERGGREGATKLMIVLTDGESHDGEELKDALEECEERNVTRYAIAV
LGHYIRRKKDPNSFINEIKYIASDPDEKYFFNVTDEAALNDIVDSLGDRIFSLEGTREYN
SFELEMSQVGFSTHLLEDGILFGMVGAYDWDGAVLKEGRSGRVIPPREAFAREFPRKLNN
HAAYLGYAVSSIRLRSGRRLYLASAPRFQHKGKVILFEMDGDGDVSISQALTGDQIGSYF
GSEVCPVDVNGDGITDILLVAAPMYLGPQNKEIGCVYLYRVGQSLLTFNGTLLPDPKPQD
ARFGYAMLAVPDLNHDSFNDVVVGAPLEDNHQGAVYLYHGYRTTVLPRFKQRIESAALRL
GLRYFGRSLDGQIDMDGDGLVDLAVGAQDAAVVLRSRRIVQINASISVNPPSINVIQKNC
QRNGKESLCVTANFCFSVSSRSLGPRDSHLSIRYNVSLDDRKFGTRAVFDSSSQKLLQKR
TRATVGRTACSTARFHVIDTSDYLRPVTITMKFALSETELPGPVLDEKLPTTVKKLIPFF
KDCGEDDECVTDLVLQAEMDISGSRQTPHVIRKGKRKMVIDVLLENKKENAYNTTLQIWF
SRNLHFSSLGLKGENPVKIECSVSSAQTRVCSVGYPVFRSSAKVAFALEFEFSCSSLLNK
VQVKLTASSDSSELNQTLADNTAQPTAFVSYEPDLFLTSESTLNRYEVHPVGTFPSDMSP
EFRTSIKIQNLACYAVSNLSLRMAFPATGYQGREFLWVTRILADNVTCSLPNHTEFGSAN
SVIPLYPEELVHTDRVNCTNAGCQVVTCQLQRLERSSEVTIHLLRAVRNEFFRKAKFKTV
KIISSITLNIQEEDNLFLLPKTAHQRQVVLEIIQSKLVPLSLWILIGSILGGLLLLTVVI
VFLWKVGFFIHKKPGEDEKEE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaagcctacagcccacatgcttcctttgggttaagccggatcatccccttt
aacattgatgtgagaagacctcaaatctttcgtgggccacgggaaactcagttcggctac
aaagtcctgcagttcacagcccaagggcaaaaatggatgttggtgggtgcaccttgggat
ggaaccgaaggtgatcggaaaggtgatgtttacaaatgcattgtggaagagaggaaaaat
tcaacatgcactaaagtcaatataggtgacatgagcctccgaaatgtttccaggcaaata
aagaacatgcattttgggatgacgctgatagctaacaaagacgacgggtttgtggcctgc
gctcccctctggtcccaggaatgtggcacatccctatatagcatagggatgtgtaccagc
ttggacaaggacttccggctgatggaaaacctcgccccaacggctcagagatgttcaacc
tacatggacatcgtgattgtcctggatggctccaacagcatttacccatggtacgaagtg
cagaatttcctgagcaacattctcagcaaatttttcattgacccagagcagatccaggtt
ggagtcttacagtacagtgaagttgcggttcatgaatggaccctgaaggattacaagacc
gcagaggaagtcattgaagctgcccaaaatatcagccggcaggaaggactcgaaactcgg
acggcttctgccatccataaggcctgcacggaggccttcagtccggaaagaggcggcaga
gaaggcgctaccaagctgatgatcgtgctcaccgatggggagtcccacgatggggaggaa
cttaaagacgctctggaagagtgcgaggaacggaacgtgacgcgttacgccatcgcggtt
ttgggccactacatccgccggaagaaagaccccaactcattcatcaacgaaattaaatac
atcgccagtgaccccgatgaaaagtacttcttcaatgtgacggatgaggcggccctcaac
gatattgtggactccttaggagatcggatcttcagccttgaagggacccgcgagtataac
tcttttgagctggaaatgtctcaggttgggttctccacccacctgctggaggacggaatc
ctctttgggatggtgggagcctacgactgggatggggccgtgctcaaggagggccggtca
ggacgtgtcatccccccccgggaagcttttgcaagggagttcccgcgaaagctgaataac
cacgcggcctatctgggctacgccgtctcttcaatcagactccggagtggccgaaggctc
tacctggccagcgccccccgtttccagcacaaggggaaagttatcctctttgagatggat
ggagatggcgacgtgtccatctctcaggccctgacaggagaccaaatcggatcctacttt
ggcagtgaagtttgccctgtggacgtgaatggggatggcatcacagatatcttgctggtg
gctgcccccatgtacctgggcccacagaacaaagagatagggtgcgtttacctttacaga
gttggccagtcactcctgactttcaatgggaccctccttcctgatcccaaacctcaggat
gctcgctttggctacgccatgctggcggtcccggatcttaatcacgacagctttaacgat
gtagttgtgggcgcccccttggaagacaaccaccagggggcagtctacttgtaccacggc
taccgtacaactgtattacctcgtttcaaacagcgcatcgaatccgcagcgcttcgcttg
ggacttcgctatttcggccgcagcttggacgggcagattgacatggatggggacggcctg
gtggatctggctgtgggggctcaggatgctgcagtggttttaagatccaggagaatcgtg
cagatcaatgcctccatctcagtcaaccctccctccatcaacgtgatccagaaaaactgc
cagagaaacgggaaggaatccctctgcgtgacagccaacttctgcttcagcgtgtcttcg
cggtctctgggtccccgggacagccacttgagtataagatacaacgtctctctggatgac
aggaagtttggcacgagagccgtctttgatagcagctctcaaaagctgctgcagaagaga
actcgggccaccgtgggcaggacggcatgctcaaccgctcgcttccacgtcattgacacc
tcagattatctccggccggtcaccatcaccatgaagtttgccctgagtgaaactgagctg
cctgggcctgtcctggatgagaaactgcccaccactgtgaagaaactaatcccctttttc
aaagactgcggtgaggacgatgagtgtgtaacagatctggtgctacaagctgaaatggat
atcagtggatccaggcagacgcctcacgtcatccgtaaagggaagcggaagatggtgatt
gacgtccttctggagaacaagaaagaaaatgcctacaacaccactctccagatctggttt
tccagaaatctccacttctccagccttggtctgaagggtgagaaccccgtgaaaatagag
tgctcagtttcttccgctcagacccgcgtgtgcagcgtgggttatcccgtcttccggtcc
tcggcaaaggtggcctttgcccttgagttcgaattcagctgctcctcccttctgaacaaa
gtgcaggtgaagcttacagccagcagtgacagcagcgagttgaaccaaacgctggcggac
aatacagcccagcccaccgccttcgtctcgtatgagcctgacctcttcctgaccagtgaa
tctaccctaaaccgctatgaagtacatcctgtggggaccttcccgagcgacatgagccca
gagtttcggacatccatcaaaatacaaaatcttgcctgttacgcagtgtccaatctgtcg
ctccggatggcatttcctgccactggctatcaagggagggaattcctctgggtgactcgc
atccttgcggataatgtgacctgcagcttgccaaatcataccgagtttggatcggctaat
agtgtgattccactgtacccagaagaattggtacacacagacagagtgaattgcaccaac
gccggctgccaagtcgtgacctgccagctgcagcgtctcgagaggagctccgaagtcacc
atccatttgctcagagccgtccggaacgagtttttccggaaggctaaattcaagacagtg
aagataatcagtagcatcaccctgaacatccaagaagaagacaacctgtttcttctacca
aaaactgcccatcagcggcaggttgtcttggagattatccagtccaaactggtccctctt
tccctctggattctgatcggcagcatccttggcggtcttctgctgttaaccgtggtcatc
gtcttcttatggaaggttggattttttatacacaaaaagcctggggaagatgaaaaagaa
gaataa
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