Pituophis catenifer annectens (San Diego gophersnake): 139322584
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Entry
139322584 CDS
T11059
Symbol
PCDH19
Name
(RefSeq) protocadherin-19
KO
K16499
protocadherin delta 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139322584 (PCDH19)
Cell adhesion molecules [BR:
pcae04515
]
Cadherins
Protocadherins
139322584 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
PepSY
Motif
Other DBs
NCBI-GeneID:
139322584
NCBI-ProteinID:
XP_070807827
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MSSSMEICVIKLEIKDLNDNAPSFPTDQIALEISETASPGTRVPLESAYDPDSGSFGVQS
YEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYMITALDGGDPPNFGTVELT
IRVIDSNDNNPLFEEPSYTVSVLENVPPGTPVIRLNATDPDEGTNGQVLYSIHSYVSEKA
RDLFQINPQTGLITVTGAIDYEEGHAYELDVQAKDLGPNSIPAHCKVTVTIQDANDNPPL
INLLSVNSELVEVSENAPPGYVIALVRVSDRDAGANGRVQCKLLGNVPFRLQEYESFSTI
LVDGRLDREQRDQYNLTIQAKDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQEN
NTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQ
TKSFEFKVLAKDGGNPSLQSNATIRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGY
LVTVVKADDYDEGENGRLSYEMAEGDRGFFEIDQVNGEIRTTRAFGENSKTTYELIVVAH
DHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKR
DNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLN
YFDYHQQTLPLGCRRSESTFLNVENQNNRNAGSNHNYHHTFTGQGPQQPDLIINGMPLPE
TENYSFDSNYVNSRAHLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDAQRGLYCDTAIND
VLNTSVTSMGSQVPEQDQSEGFHCREECRILGHSDRCWMPRNPAPARGKSPEHGRNVMSL
SIGASTVDTELYEDSTAKRTFATFGKDRSDPVSEERGPINVKGKRTLDPPICSPKVNGAI
REAGNGCEAISPITSPVHLKSPSSSKPSVSYSLFHCPSSRDLEPFVTNGPSRPMEAEPRG
ADSENTVHEINPLLQECREKDSPGVKRLKDIVL
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctccatggagatctgtgtgatcaagctggagattaaagacctcaatgataat
gctcccagttttcccacagatcaaattgcgctggagatctccgagacagccagcccgggg
accagggtaccacttgaaagtgcttacgatccagactcgggcagttttggagtgcagagt
tatgagatcactcccaacgatctctttggcttggaaaccaagacccgaggggatggttct
cgctttgccgaactggtggtggagaagagcctggatcgagagacccaatctcattacagt
tacatgatcacagctttggatgggggggacccgcccaactttggaacggtggagttaacc
atcagagtcattgactccaatgacaataaccctctctttgaagagccctcttacactgtt
agtgtgctggagaacgttcctcctggcacaccggtgatccgcctcaatgccacagacccc
gatgagggcaccaacgggcaggttttgtattccatccacagctacgtctccgagaaggcc
agggacctcttccagatcaaccctcagaccggcttgatcacggtcactggggcgattgac
tacgaagaaggtcacgcctacgaactggacgtacaggctaaagatctgggtcccaactcc
atcccagcccattgcaaagtgactgtcactatacaggatgccaatgacaacccacccctc
attaacttgctctctgtcaatagcgagctggtggaagtcagcgagaacgcaccaccaggc
tacgtcatcgccttggtgagagtttccgacagagatgctggtgccaatggccgagtgcaa
tgtaaactgttaggcaacgtgccctttcgcttgcaggaatacgagagtttctccaccatc
ctagtggatggacgtttagacagggagcagagggaccagtataatctaaccatccaagcg
aaggacaatgggatcccttctttgcaggccacaaagtcctttactgtcaagatcacagat
gagaacgacaaccaccctcacttctccaaaccttattaccaggtcattgtgcaggagaac
aatacccccggggcctacctcctttccgtttctgccagggatcctgacctgggtctaaat
ggcagtgtctcctatcagattgtcccatcccaagtcagggatatgcctgttttcacctat
gtctccatcaaccccaactcgggagacatctacgccttgagatcgttcaaccatgagcag
accaaatcttttgagttcaaggtcttggccaaagatggaggcaacccttccttgcaaagc
aacgccaccatccgagttattgtcctggacgtcaacgacaacactcccgtgataacagcc
cctcctttagtcaatgggaccgcggaggtctacatccccaggaacgctggtgttggctac
ttggtgaccgtggtcaaggcagatgactatgacgaaggggagaacgggagactttcctac
gagatggctgaaggggatcgagggttttttgagatcgaccaggtcaatggtgagataagg
accaccagagcctttggggaaaactccaagactacttacgagctgattgtcgtggcccac
gaccacgggaaaacgtcgctttcggcatcggccttgattttgatatatctttctccagcc
ctggatgcccaagaatccataggatctgtaaatttgtccctgatttttattattgccctg
ggttccattgctgccattctgtttgtcaccatgatctttgtcgctgtcaaatgcaaacgg
gataacaaagaaatcaggacttacaactgcagaattgcagagtactcctacggccaccaa
aagaaatcctccaagaagaaaaaaatcagcaagaacgacatccgcctagtgccccgggat
gtagaggagactgataaaatgaacgttgtcagctgttcctccttgacgtcatccctcaac
tactttgactatcaccaacagactctgccactgggttgccgccgatcagaaagcaccttt
ctcaacgtggagaaccaaaacaaccggaacgccggctccaaccacaactaccaccacacc
ttcacgggtcagggaccccagcaaccggatctcattatcaacgggatgcctctcccagag
accgaaaactactcgtttgattccaactatgtgaacagccgagctcatttaataaaaagc
tcgacgttcaaagatttggaggggaacagcttgaaggacagcgggcacgaagagagtgac
cagacggacagtgaacatgatgctcagcggggcctctactgtgacacagctattaatgat
gttttgaataccagtgtcacctccatggggtctcaggtgcccgaacaagatcagagtgaa
ggattccactgtcgagaagagtgtcggatccttggccattctgaccgatgctggatgccc
cggaatcccgcccccgcccgaggcaaatctcctgaacatggaaggaacgtcatgtccctc
tctataggagcttccactgtggatacggagctttacgaagactctactgcaaagagaact
tttgcaacatttggcaaagacaggagtgaccctgtttctgaggaacggggcccgatcaat
gtcaaagggaaaaggacattggatccacccatctgtagtccaaaggtgaacggggccatc
cgggaggctgggaacggttgtgaggctatcagtcccatcacctcgcccgtccatttgaag
agtccctcgtctagcaaaccgtcggtgtcctacagcctatttcactgcccgtccagtcgc
gacttagagccgtttgtgaccaatggtccctccaggcctatggaagcagagccgaggggc
gcggacagtgagaatacagtgcatgaaattaaccctctcctacaagaatgtagggagaaa
gactcgcctggcgtgaagaggctaaaggatattgtactctaa
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