Pituophis catenifer annectens (San Diego gophersnake): 139322624
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Entry
139322624 CDS
T11059
Symbol
AFF2
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139322624 (AFF2)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139322624 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
139322624
NCBI-ProteinID:
XP_070807880
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MVTKTGHRIPNVASPMHHYEQDRNALKRKEWERRNQEIQQDEDLFASGFNLFGEPYKTSK
GDALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNPVPQTPVDKNEPSFFPEQRNRMV
APHQMGGNTSTAMPPPSSLLSNPSLLNGHQSSRKSRTEWSRSNHSSSGGQSNQASSQPNR
TKHSSSHEPTQGRYEDLYPCQNEPQKTGGGEELNTPPSSSHSRRHNHSKSTAAEHSYKET
THSKSPVDLDFLSHGSPLPSTSLLSAANNLSNQNFPPGLHCKSSMIQQKPTAYVRPMDGQ
DQVPNDSPELKPPIETEGVYGNQSFGSLLEGKTTGSSSKNKLPKLTIPQMNEVSLPNDSN
CVEEILREMTHSWPPPLTAIHTPGKAEQNKFTIPSKAQDCQHLTSGYPAQKWNEPTNKVA
TKSVPQKSMLEDDLKLSSDEDDNDQHPSKGLQKLIDGKFHTSKPKKPSAAIRRDIFTRLK
FLACPIYGLPLPTAHNTVLIHSSGGSGSSSESESSSESDSDSETSSSDSECNEESRSGTP
EPEPPSANKWQLDKWLNKVNPHKTIISNQHDGHGENSVPSQTGPQMEGQNKGKVNNSLSL
TDSKDRALRSPIREKAKPRVAQKTPADVKSSKQKSPVHNEPVPQRTTGKKQPKKVERTSS
AEDYNWPKPNMTSSTPKEKEAQESPEQAKLRAKMAAGKTAPRKEPRATTIPPLEKKKYRG
PSKTFPKSREFVETDSSTSDSNTDHEESLQAKSLQGGSSSDSGIKAKDSSSNILSVSSLL
SNNSNTSVDQNGPDLEEPFFSPLPIVQNEPLSPLKDFEELKYLWVKIDLSFLSRVPGQDL
DFENVSGKMEPREVNTKHRRQAPDSPLPPAEKPSAKTKRKHKQSENVGTFGDSKKQRLEE
STASCLLPPCISPIPNHRIPSIKESNSMKKVTKKREEKLFPPPLSPLMDEAAPRHNILDN
GSFNQENSLPGSLQSNACSKHRKNENKSSVNSKGISEEDAHSRPSNPLLESSHLDNDLWL
TSPTFTNGNPELRRPKITFDDMLHNADYYMQEAKKLKHKADALLEKFGKAVNYADAAISF
IECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLL
YLRMFKLKKDHAMKYSRSLMEYFKNSSKVSQAPSPWGGKSTETPSPMSLSPSPISNLGST
TSTAGSSSVGTVSIPQRIHHMAASHVNITNNVLRSYEHWDMADKLTKENKEFFIDLDLVM
GPLTQHSSMTNLVRYIRQGLHWLRTEAHLL
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaaacgggacacaggattccaaatgtggcctcaccaatgcatcactatgaa
caagatcggaacgcccttaagaggaaggaatgggagcggagaaatcaagaaatccagcaa
gatgaagacctctttgcatctggctttaatctctttggagaaccgtacaagaccagcaaa
ggtgacgctcttgccaaccgtgtgcagaacactttggggaactacgatgagatgaaggac
ctgctcaccaaccattctaaccagagccaccttgtcggcatcccaaagaatcctgtgccg
caaaccccagtagacaaaaatgagccgagctttttccccgagcaaaggaaccggatggtc
gcgccccaccagatgggtgggaacacctcaacggctatgcctcccccatcttccctgttg
tccaatccaagtttgctgaatggccaccagagcagcaggaaatccaggacggagtggtcc
cgtagcaaccacagctctagcggtggccagtcgaaccaagccagtagccagcccaatcgg
accaaacatagctcttctcatgagccaacccaaggccgatatgaggacctttatccctgc
cagaatgagccacagaaaactggaggaggggaggaactcaacaccccaccttcatcttca
cattcaaggaggcacaatcactccaaatccactgcggccgagcactcctacaaagaaact
acccactcgaagtctccggtggatcttgattttctgagtcacggatctcctcttccttct
acatctttgctatccgccgctaacaatctttccaaccagaactttcctcctggactccac
tgtaaaagcagtatgatccagcagaagcccaccgcttacgttaggcccatggatggccag
gatcaagtcccgaatgactccccagaattaaaaccacccatagaaactgagggggtctat
ggaaaccaatcctttggaagtctactggaagggaaaaccaccggatccagttctaagaat
aaactaccaaagcttaccattcctcaaatgaatgaagttagccttcccaatgactccaac
tgtgtggaagagatattacgggagatgacccattcatggcctccgcccctcactgctatc
cacactcccggcaaagcggaacagaacaaatttactatcccaagcaaggcccaggattgc
cagcatctgacctcaggataccctgcacaaaaatggaacgagcctaccaataaagttgca
accaaatctgtgccacagaaatcaatgcttgaagatgacttgaaactcagcagcgatgaa
gacgataatgatcagcacccttccaagggtttgcaaaagctgattgacgggaaattccat
acttcgaaaccgaagaagccttcagcagcaatccgaagggatattttcacacgtcttaag
ttcctggcgtgtcccatctatggccttccattgccaacagcacacaacactgtcctcata
cattccagtggcggatccggaagttccagtgaatctgaaagtagttcggaatccgattca
gacagcgaaaccagctccagcgatagtgaatgcaatgaagaatcacgtagcggaactccg
gagcctgaacccccctcagctaacaaatggcagctggacaaatggctaaacaaagtcaat
cctcacaagacgatcatcagcaaccaacatgacggtcacggggagaacagcgttccgtcc
cagaccgggcctcaaatggaaggacaaaacaaagggaaggttaacaacagcttgtccctg
accgattccaaagacagggccctccgcagccccatccgagagaaagccaaaccccgagtg
gcacagaaaacccctgccgatgtgaaaagttccaagcagaaatcccccgtgcacaatgag
ccagtcccccaaaggacgactgggaagaagcaacccaaaaaagtcgaaagaacttccagc
gcggaagattacaattggcccaaaccaaatatgaccagcagcacccccaaagagaaggag
gcacaagagagcccagaacaggccaaactgagggccaagatggccgccgggaaaaccgct
ccgaggaaggaacctagagccaccaccatcccgcctctggagaagaaaaagtacagaggt
cccagcaaaacctttcccaagtcgcgggagtttgtggaaacggattcgtccacctcggat
tccaacaccgaccacgaagagagcctgcaggccaagagcctgcagggagggagcagctcg
gacagcggcatcaaagccaaggactccagcagcaacatcctcagcgtcagcagtttattg
agcaataacagcaacacttcggtggaccagaacgggccggatttggaggaaccatttttt
tcacctcttcccattgttcagaacgaacccctgtcccccttgaaggattttgaagaactc
aagtacctttgggtgaaaatagatctgagtttcctctctagggtccccgggcaagatctg
gactttgagaacgtctctggaaagatggaacctcgagaggtcaacaccaagcatcggcga
caggcgcccgactctcccttgcccccggctgaaaaaccatctgctaaaaccaaaaggaag
cacaaacagtcggaaaatgtgggcacattcggcgacagcaagaaacaacgtttagaagag
tctacggcttcctgcttgcttccaccctgcatttcaccgatacccaaccatagaataccc
agcataaaagaaagcaactccatgaaaaaagtgaccaaaaagagagaagaaaaactcttc
ccacctccgttgtctcctctgatggacgaggcagctccgcggcataacatcttggacaac
ggctccttcaaccaagagaactccctaccaggctccttgcagagcaacgcctgctccaaa
cacaggaagaacgagaacaaatcttctgtcaactccaagggaatcagtgaagaagatgct
cacagcaggccctcaaatcctttgctggaatccagccacctcgacaacgatctctggttg
acaagtcccaccttcaccaacgggaatcctgaattgagaagacccaagataacatttgat
gatatgcttcacaatgctgattactatatgcaagaagccaaaaaactcaagcataaggca
gatgctttgctggaaaaatttggcaaagcggtgaattatgccgacgcggcgatctccttc
atcgaatgcgggaacgctatggagcgagatccgttagaggcaaaatctccctacaccatg
tactccgagacggtggaactcatcaggtacgccatgagacttaagaacttcacggggtct
tccgccacggaaggagacaagaaacttgcagtcctctgctaccgctgcttatcccttctc
tatctgagaatgtttaaactgaagaaggatcacgcaatgaagtattccagatccttgatg
gaatattttaagaattcatccaaagtttcacaggccccttctccttggggaggcaagagc
acagaaacgccatcccctatgtctctgagcccctcgcccatcagcaaccttggaagcacc
acaagcacagcaggctcctcttcagtggggactgtcagcatcccccaacggatccaccac
atggccgccagccacgtcaacatcaccaacaatgtcttgcggagctacgaacattgggac
atggccgacaaactgacaaaagaaaacaaagagttcttcatagacttggacttggtgatg
ggtccattgacacaacacagcagtatgaccaacctggtccgttacattcgtcaaggactc
cattggcttcgcacggaagcacacttgttgtag
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