Pituophis catenifer annectens (San Diego gophersnake): 139322671
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Entry
139322671 CDS
T11059
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139322671 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139322671 (CSTF2)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
139322671 (CSTF2)
U7-dependent histone pre-mRNA processing factors
139322671 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139322671
NCBI-ProteinID:
XP_070807948
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARSMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPSLIPGNAQPGPGQGPGPGPGAGPGPGPGPGPGPNAQMNQPNI
PSSQPQPMGGMHVNGAAPLMQPPMQGGVPAPGQMPASVPGPGPGPMAPGGSMPGSGPMIM
ERGQVPMPDPRAPMHRGPMPASGPPPRGLLGDAPNDPRGGTLLSVTGDVEPRGYLGPPHQ
GPPMHHMPAHDSRGLPPHEMRGGPMGEPRPLMGEPRGPLMDGRGGRDPRGMEPRVMDGRG
MEPRVMDGRGMEPRGMEPRGMEPRVMDARGMEPRGMESRVMDARGMEPRGMESRVLDARG
IEPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGM
EPPRGMEPPRGMEPPRGMEPPRGMEPRGMEPPRGMEPRGPGMEPRGPGMETRGPGPNPRG
PMTSAIQGPGPLNMGSAGPQGPRQVPNMPGTTMQQAGAMAGGAVQPAAQPGGFSPGQNQV
TPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttgtcagtgcgggaccccgcggtggatcggtctctgcgctccgtgttcgtg
ggcaacatcccttatgaagccacagaggaacagctaaaagacatcttctcagaggttgga
cctgtggtcagtttccgattggtatatgaccgagaaacaggcaaaccgaaaggctatggc
ttctgtgagtatcaagatcaagaaaccgcactcagtgccatgcggaatctcaacgggcga
gaatttagtggaagagccttgcgagtggacaatgcagccagtgagaagaacaaggaggaa
ctcaagagcctgggcactggtgctcccatcatagaatcaccctacggagaccccgtcaac
cctgaagatgctcctgagtccatcagcagagcggtggccagcctgcctcctgaacagatg
tttgaactgatgaagcaaatgaagttgtgtgtccagaacagccctcaggaggcgcggagt
atgctcttgcaaaaccctcaacttgcctatgccttgctgcaggcccaagtggtgatgcgt
attgtggacccagaaattgcgctgaaaattcttcatcgccaaaccagcgtcccatctctg
attcctggaaatgcacagccagggccagggcagggtcctggtcctggaccaggagctggt
cccgggccaggacctgggccgggacctgggccaaatgctcagatgaaccagccgaacatc
ccttcttctcagccacaaccaatgggcgggatgcatgttaatggagctgctcccctaatg
cagccccccatgcaaggaggagtacctgccccaggccagatgccagcttcagtgcccgga
cctggtcctggacccatggctccaggaggtagcatgccagggagcggcccaatgatcatg
gaacgcggacaagtacctatgccggacccacgagcccctatgcaccgggggccaatgcca
gctagtgggccaccaccccgaggccttctgggagatgcccccaatgacccacggggaggc
acgttgctctcggtcacaggagacgtggagcccagaggttacctcgggccaccccaccag
ggaccaccaatgcaccacatgcccgcacatgacagccgtgggctgcctccccatgaaatg
agaggcggaccaatgggagagccacgtcccctgatgggagaaccacgagggcccttgatg
gatggccgaggtggacgagacccaaggggcatggagcccagagtgatggatggccggggc
atggagcccagagtgatggatggccggggcatggagcccagaggcatggagcctagaggc
atggagcccagagtgatggatgcgaggggcatggagcccagaggaatggagtccagagtc
atggatgcaaggggcatggagcccagaggaatggagtccagagtcctggatgcaagaggc
atagaacctcgtgggatggagccccccagggggatggagccccccagggggatggaacct
ccccggggcatggaacccccccggggcatggagccccccaggggcatggaaccccccagg
ggcatggagccccccaggggcatggaaccccccaggggcatggagccccccaggggcatg
gagccccccaggggcatggagccccctaggggcatggagccccctaggggcatggagccc
cctagaggcatggagccaaggggtatggagccccctagaggaatggagcccagaggccca
ggaatggagcccagaggcccaggaatggagaccaggggacccggtccgaaccccaggggc
ccaatgaccagtgcaattcaaggtccggggcctctgaatatgggatctgctggcccacaa
ggccctcgacaggttcctaatatgccagggacgacaatgcagcaggctggagccatggca
ggcggagcggtacagcctgcagcccagcctggaggcttcagccctgggcaaaaccaagtc
acaccccaggatcatgaaaaggcagccctcattatgcaagttctccagctgacggccgac
cagatcgccatgctgcctcccgaacagaggcagagcattctcattttgaaggagcagata
cagaaatcgactggtgccccatga
DBGET
integrated database retrieval system
