Pituophis catenifer annectens (San Diego gophersnake): 139322732
Help
Entry
139322732 CDS
T11059
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139322732 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139322732 (ATRX)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139322732 (ATRX)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
139322732 (ATRX)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139322732 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
139322732
NCBI-ProteinID:
XP_070808035
LinkDB
All DBs
Position
Unknown
AA seq
2366 aa
AA seq
DB search
MTAEPASESKLNTLVQKLHDFLAHSSEESEDANSPPRLSMSKNIDSESMPGNIPAPVENN
KEEGSSSSERSKSLGSSRSKRKPIVVTKYVGSDEEQTLDETIIQDVSNENSENEVDMKSL
PKGTIVVQPEPVLNEDKDDFKGPEFRNRNTTKLKPEAQKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCFKYYMSDDISRDADGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTIMDENNKWHCYICQPEPLLDLVTACDSVFENLEQLLQQNKKRIR
VDSDKSKMYDNSLKYSSKKNSSNCNGEEKKLDHPYSGALTYSYKALMVPKALLKKTKKLA
ETTTNMNASFIKFLKEAAENSEINRTVHIRQLKAFKSVLNDIKKAHAALEEGLNLEIQTL
GAKFKQKPTKEKETEIKMSNSEMKRTEGKECKETKIVSEVSEPSSDQSVPVTERTGNKKL
NCKDKKTGKSEELQYKPNNIEATDMDILSVPSSVPEDIFESCMDVQKAGGQSTVNRTEHG
SGNTNKSKDSKGGTKLINSPKVKKELVVKLTPVSFSSSPVKPEDQDEKLEKGEDKEDGKE
NCSSECMPEKDFLSQVEDLRRSPRVKTTPLRRPTDINTLTSNSEEDSNEPYGEKYGRKTT
PSKRKKDKESSPSSTVCSPPSNKELAGDPSSDSDEMPAVLQEVAMMSQNSSDPDSSNEIP
KEALNTLKRMVKEDNGKRKRKSSSSGSDFDAKKDNSNKDLGAAKKKRQNCSDSSHNDSEL
ERENTTKTEQTKRTTKETPKKENYISVEEKLPKKETRESNQKQQNELPSEVDEFLISDKE
KAGSSLEDTSGKEASVKEKQGQNVKESALKGRQNVSSRKDNSSTSGKQSKPWGKLRDLSS
DDAGRSPKQEQSGESSDEIKKAKKEKEKSTNERKASERRQSDSSSEIDKPSPEKESCSAS
GSSSKNQKTLEGKTGRNLRGRTSKKLQDNVSDAEKSPPNEAVCDPLEDHLNKKGEKAKEK
KKNPKRRNSKKQRGEFLSSSDEDFYEEKKNKKRGTAKKGNGKGGSKETGKRELKKTKDTS
VSAAATSSSSDEAENENLNSAGEESSDEQKIKPVTESLLVDRKLGFFQSSGDEGEHQSAA
VPMEEEEDDDDDPENRIAKKMLLEEIKANLSSEEDASSDEESNDGKKKKGRRAKNKNNSG
ENEQEDEFDSDSDAEEAKKPRYRHRLLRHKLTMSDGESEEEKKGKSKEAKEVKRRNRRKV
SSEDSDNSEANESGISEEVSESEDDQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDS
SSENNKSNSEDDDNDDSKSPGKGRKKIRRIIKDDKLRTETQNALKEEEERRKRIAERERE
REKLREVIEVEDTPLKCPITTKLVLDEDEETKEPLVQVHQSIVTKLKPHQVDGVQFMWDC
CCESLKKTKKSAGSGCILAHCMGLGKTLQVVGFLHTILLCDKLDFRTALVVCPLNTALNW
MNEFEKWQEGLEDDEKLEVSELATVKRPQERGYMLQRWQDEGGVMIIGYEMYRNLAQGRN
VKSRKLKEIFNKSLVDPGPDFVICDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNN
LIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGC
VQRKDYTALTKFLPPKHEYVLAVRMTPLQCKLYQYYLDHLTGVSNSSEGGRGKAGAKLFQ
DFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDDFIVSDSEETSMSLSSEEDTKKKKTK
GKKSKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGTVEEPISNPPIILKAEEGKSTSSNP
GSPAPDWYKDFVVDADAEVLEHSGKMMLLFEILRMAEELGDKVLVFSQSLISLDLIEDFL
ELANRDKEEEKPVIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEDFNDVTNIRGRLFIIS
TKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIY
DRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPSSEKKKKRDTPMLPKDTI
LAELLQIQKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRINIPAGPN
MFPPNFTSQTPYIPFNLAALSAMSNQQLEDLINQGREKVVEATNNVTGARIQPLEDIISS
IWKENLTLTETQVQALALNRQAGQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQ
QFSQQQQQLPQQHPQLAYQQAQQAAMSHLMMAKPPPGLMMNPSNFQQIDLRGMYQSAAGA
LHPPPLQRAPPPMSGKNPGPSQGKPM
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgcgagtgaaagcaaattgaatacattggtgcagaagcttcatgac
ttcttggctcactcatcagaagaatcggaggatgcaaattctcctccaagattatcgatg
agcaaaaatatagatagtgaaagtatgcctggaaatattccagccccagtggaaaacaac
aaggaagagggtagtagctcttctgaaagatccaaatcattaggatcatcgcgctccaaa
agaaaacccatagttgtaacgaaatatgttggctcagatgaagaacaaactttagacgaa
accattattcaagatgtttcaaatgaaaactcggaaaatgaagttgatatgaaaagtttg
ccaaaaggaactattgttgtacaaccagagccagtacttaatgaagacaaagatgacttt
aaaggacctgaatttaggaacagaaatactactaaactaaaaccagaagctcagaagaag
cgaggagaggaagggcttcatggaattgttagctgtacagcttgtggtcagcaggtgaat
cattttcaaaaagattctatctacagacatccaacattgaaagttcttatatgtaagact
tgtttcaaatattatatgagtgatgacatcagccgtgatgcagatggaatggatgaacag
tgtagatggtgtgctgaaggtggaaacttaatttgctgtgacttttgccataacgcattc
tgcaaaaaatgtatattgcgcaatttaggccgaaaggagctgtcaactataatggatgaa
aataataaatggcattgctatatttgtcagccagaacctttgctggacttggtcactgct
tgtgatagtgtatttgaaaatttggaacaattattacagcaaaataagaagagaatcaga
gtcgacagtgataaaagtaaaatgtatgataattcccttaaatattcttcaaagaaaaat
agttcaaattgtaatggagaagaaaagaaattagatcatccatattctggtgctctaact
tattcctataaagcattaatggtgccaaaagcactgctgaaaaaaacaaaaaagcttgct
gaaaccacaactaacatgaatgctagttttataaagtttctcaaggaggcagctgaaaat
tctgaaataaacagaacagtacatatacgtcagctgaaggcgtttaagtctgtgttaaat
gacattaaaaaggctcatgcagcattggaggaaggtctgaacctggagattcaaactctg
ggtgctaaattcaaacagaaacctaccaaagagaaagaaacggaaattaaaatgagtaac
agtgaaatgaaaagaactgaaggaaaagaatgcaaagaaactaaaattgtatcagaagtc
agtgagccttccagtgatcagagtgtgccagtaacagagcggacgggaaacaaaaaattg
aactgtaaagataaaaagactggcaaaagtgaagagcttcaatataaacctaataacatt
gaagcaacagatatggacattctttctgttccctcatctgttcctgaggatatttttgaa
tcctgtatggatgtgcagaaagcaggtggacagagtactgtaaacagaacagaacatggg
tcaggaaatacaaataaatctaaagatagtaaaggtgggactaagttgataaattctccc
aaagttaagaaggaattggttgtaaaattgacaccagtttctttctcctcttctcctgtg
aaacctgaggatcaagatgaaaaactggaaaagggagaggacaaagaagatggaaaagaa
aattgtagttctgaatgcatgccagaaaaagatttcctttcacaggtagaagatctcaga
aggtctccacgagttaaaactacacctttaaggcgtccaacagacataaataccttaact
tctaattctgaggaagatagcaatgaaccgtatggtgaaaagtatggcagaaaaaccaca
ccgtccaaaaggaaaaaagacaaggagagttctccgagcagcaccgtttgcagtcctccg
tcaaacaaagagcttgctggagaccccagttcggattccgatgaaatgcccgcggtgctc
caagaggtggccatgatgagccagaattcttcagatcctgatagcagcaatgaaataccc
aaagaggcgctaaatacattaaagagaatggtgaaggaggataacggaaaacgaaaaagg
aaaagttctagttctggttcagattttgatgctaagaaagataattcaaataaagattta
ggtgctgctaaaaagaaacgccagaactgctcagattcttctcataatgattctgaattg
gaaagagaaaatacaacaaaaacagagcaaacaaagagaactacaaaagaaacgccaaag
aaagagaattacatttctgtggaagagaaattacctaaaaaagaaacgagagaatcaaac
caaaagcagcaaaatgaattgcccagtgaagttgatgaatttttaatttcagacaaggag
aaggcgggcagctctttggaagacacatctggtaaagaggcctctgtgaaagaaaagcag
gggcaaaatgtcaaagagagcgcattgaaaggaagacagaatgtttcctctagaaaagac
aacagcagcacttcaggcaaacaaagcaaaccatgggggaaactacgggatttatcttct
gatgatgcaggacggtccccaaagcaagaacaaagtggtgagtcctcagatgagatcaag
aaagccaaaaaagaaaaagaaaaaagcacaaatgagagaaaggcctctgaaaggaggcaa
agtgattcctcttctgaaattgataagccttctccggaaaaagaaagctgcagtgcttct
ggaagcagcagtaaaaaccaaaaaacacttgaaggaaaaacaggaaggaatttaagaggg
agaacttctaagaaactccaagataatgtttcagatgctgagaaatctcccccaaacgaa
gcggtctgtgaccctttggaagaccatttaaataaaaagggagagaaagctaaagagaaa
aagaaaaaccctaaaaggaggaattcaaaaaaacagagaggcgagttcctttcttcttct
gatgaagacttctatgaggagaaaaagaacaaaaagagagggacagccaagaagggaaac
ggcaaaggtggctctaaagagacagggaaacgcgagttaaaaaaaaccaaggacacatct
gtcagtgctgctgccacgtcatcctcatcagacgaagctgaaaatgaaaatttgaattca
gcgggtgaggaaagcagcgatgagcagaaaataaagccagtaacagaaagtttgttggtg
gacagaaaactgggattttttcagtcttcaggagatgaaggagagcatcaatctgcagct
gtgccaatggaagaagaggaagatgacgacgatgatcccgagaatagaattgccaagaaa
atgcttttagaagaaatcaaagccaatctttcctcagaggaggatgcttcttctgatgaa
gaatccaatgatgggaagaaaaagaaaggaaggcgagccaaaaacaaaaacaacagtgga
gagaatgaacaagaagatgagtttgactcggattcagatgccgaagaggccaagaaacct
agatacaggcaccgtttgttaagacacaaattaacaatgagtgatggagagtccgaggaa
gagaaaaagggaaaatctaaagaggcaaaagaagttaaacgcagaaataggaggaaggtg
agcagtgaggattcggataattcagaagccaatgaatctggaattagtgaagaagtgagt
gaatctgaagatgatcaacgtcctagaacgagatccgccaagaaagcagaattagaagaa
aatcagaggagttacaaacagaagaagaaaaggagacgcataaaagtccaggaagattca
tctagtgaaaacaacaagagtaatagtgaagatgacgataatgatgattctaagtctccc
ggaaaaggcaggaaaaaaataagaaggattattaaagatgataaactcagaacagaaacg
caaaacgcgttgaaagaagaagaggagagaagaaaacggattgcagaaagggagcgtgag
agggagaagctcagagaagtaatagaagtagaagatacacctttgaaatgtcccattaca
actaagctggttttagatgaagatgaagaaaccaaagaaccgttagtgcaagttcatcaa
agcatagtgacaaaacttaaacctcatcaagtagatggtgttcagtttatgtgggattgc
tgttgtgaatctctgaaaaaaaccaagaaatctgcaggctcgggatgcattctggctcac
tgtatgggtctgggaaagaccttgcaggtagttggtttccttcataccattttgctttgc
gacaaactggatttcagaactgcccttgttgtgtgtccattgaataccgccctcaactgg
atgaatgaatttgaaaaatggcaagaaggcctagaagacgatgagaaacttgaggtctct
gaactagcaacagtgaaacgcccccaagagaggggctatatgctgcaaaggtggcaggat
gaaggaggcgtcatgatcataggctatgaaatgtatcgaaaccttgcacaagggaggaat
gtgaagagcagaaaactgaaggaaatatttaacaaatcattggttgatcctggcccagat
tttgttatctgtgatgaaggacatatcctaaaaaatgaagcttctgctgtttctaaagct
atgaattctatcagatccaggcgaaggataattcttacagggacccctttgcaaaacaat
ctcatagaatatcactgcatggttaatttcatcaaggagaatttacttggatcagttaag
gagttccgaaatcgatttataaaccccatccagaacggccagtgtgctgactccactcta
gtagatgtgagagtaatgaaaaagcgggcacatatcttgtatgagatgctagctggatgt
gttcagaggaaagattatacagcgttgacaaagttcctgccaccaaaacacgaatatgtc
ctggctgttaggatgactccccttcagtgtaagctgtaccagtactacctggatcactta
acaggtgtcagcaacagcagtgaaggtggaagaggcaaagctggagctaaactcttccaa
gatttccagatgttaagcagaatttggactcatccttggtgtttgcagctggattatatt
agcaaggaaaacaagggttattttgatgaagacagtcttgatgacttcatagtttctgat
tctgaagaaacgtcaatgagcttaagctctgaagaagatactaaaaagaagaaaacaaag
ggcaagaaatctaagaaagacagtagttccagcgggagtgggagtgacaatgacgtggaa
gtgattaaagtctggaattcaagatctcggggaggtggagaaggaacggtagaagagcca
atcagcaaccctcccatcattttaaaggcagaggaaggtaaaagtacttcctccaaccct
ggcagccccgcccctgattggtataaggactttgtggttgatgctgatgcggaagtgctg
gagcattcggggaagatgatgctcctctttgaaatcctgcgcatggccgaagaacttgga
gataaagtcttagtgttcagccaatctctgatatcccttgacttgatagaagattttctg
gagttagcaaaccgggacaaagaagaagaaaagccagtaatatataaaggtgaaggaaaa
tggttcagaaatattgattattatcgtttggatggttctacgactgctcagtcaagaaaa
aagtgggctgaagattttaacgatgtaaccaacatcagaggccgtttgtttattatttct
actaaagcaggatcccttgggataaacctagtagcagcaaatagagttattatttttgat
gcttcttggaacccatcttacgatattcagagtatcttcagagtgtatcgttttgggcaa
aataaaccagtttatgtgtatcgatttttagctcagggaaccatggaagacaagatctat
gatagacaggtaacaaaacagtcactgtctttccgagtggttgatcagcagcaggttgaa
cgccattttaccatgaatgaactcacagaactctacacctttgaaccagacttactggat
gatcccagttcagaaaagaagaagaaaagagacacgcctatgttacccaaagacacaatt
ctagctgaactgctgcagattcagaaagaacatatagtgggttatcatgagcatgattcc
cttctggaccacaaagaggaagaagaattgactgaagaagaaaggaaggcagcttgggct
gagtatgaagctgaaaagaagggtctgacaatgcgcatcaacataccagcggggccaaac
atgttcccccccaatttcacatctcagactccatatattcctttcaacttggcggccttg
tctgcaatgagcaaccagcagttggaggacctcattaatcaaggcagggaaaaagttgtg
gaagcaacgaacaatgttactggagcaagaattcaacctcttgaagacattatttcctct
atatggaaggagaatctcaccctcacagagacgcaggtccaggctttggctctgaaccgc
caggcaggtcaagagctggatgtgaagcgccgagaggctatttataatgatgtcttgacc
aagcagcaaatgctcatcagctgcgtccagaggatcctgatgaaccggcggctgcagcag
caattcagccagcagcagcagcagctcccgcagcagcacccgcagctcgcctaccagcag
gctcagcaggcagccatgagccacctgatgatggccaagccccccccgggcttgatgatg
aacccctccaacttccagcagatcgacctccgaggaatgtaccagtctgctgctggggcc
ctgcaccccccacccctgcagcgagcgcctccccccatgagtggcaaaaacccaggaccc
tcccaagggaaaccgatgtga
DBGET
integrated database retrieval system
