Pituophis catenifer annectens (San Diego gophersnake): 139322768
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Entry
139322768 CDS
T11059
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139322768 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139322768 (NUP62CL)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139322768 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
139322768
NCBI-ProteinID:
XP_070808087
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSQFGFGTGGGGGGFSFGTPKTAVSSGTSTSAAPAGFSFSSAISAGAGTGGAFGFGSPAP
NAGSAPPAAGLFSFATPAASAQASAFSFGMPPASSAAAATPAGGVFTLGGNAPKLSLGGS
GATTAPTATGGFGLGSSGGLAGSGASSNVPATQAATATPAGFVFGSGTTTTPQPAPAAPA
AAGGFSFGGAAQTGAPNFSLGSLGSAAPQTVSTGPAFGIVPASTNAAVSTAAASQAAPAF
SLGTASTGSGFGALAPAAVTSTATALSFGAKPGGTTVTSVAPAITSSSSLLGLSGPTLFA
TVAGSSAPAACTATSLSVGTSSTGVASIGTLGFGSKMPGMTTAVAAAPPTAGAASIPVTG
FLLNLKPLATTSVAASTSTATTTTGMTPPVMTYAQLESLINKWSLELEDQEKHFLQQATQ
VNAWDRTLIENGEKITTLHREVEKVKLDQKRLDQELDFILSQQKELEDLLIPLEESVKEQ
SGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADNSDPLQQICKI
LNAHMDSLQWIDQNSALLQRKVEEMTKVCDSRRKEQERSFRITFD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttcggcttcggcacgggcggcggcggcggcggcttcagcttcgggacgccc
aagacggcggtcagcagcggcaccagcaccagcgcggcccccgcgggcttctccttctcc
tcggccatttcggcgggcgcgggcacaggcggcgccttcggcttcggctctcccgccccg
aacgccgggagcgccccgcccgccgccggtctcttctccttcgccacgcccgccgcctcc
gcgcaggcctccgcgttcagcttcgggatgcccccggcctcatccgcggcggcggctact
cccgcggggggcgtcttcacgctggggggcaacgcgcccaagctgagcttggggggctcg
ggcgccaccacggcccccaccgcgaccggcgggttcgggctgggcagtagcggcggactg
gccggctccggcgcgagcagcaacgttccggccacccaggcggcgacggcgacacccgcg
ggattcgtgtttggctcaggaaccacgacgacgccacaaccagctccggctgcccccgcc
gccgcgggaggcttcagctttggcggggcggcccagacgggggctccaaattttagcctc
ggctcgctggggagtgccgcgccgcaaacggtgtctaccggcccggccttcggaattgtt
ccggcctccaccaacgcagctgtgagcacagcagccgcatcgcaggcagccccggccttc
agcctcgggacagcgtccaccggttctggctttggagccttggctccagcagctgtcact
tccaccgccacagccttgtcctttggggctaaacctggaggtaccactgtcacttcggtg
gcacctgccattacaagttcatcttccctccttggcctatcagggcccacactgtttgca
actgtagcaggctcttcggctccagctgcctgtactgccactagcctttcagtgggtacc
tcctcaacaggggtggcttccattgggaccttgggatttggctctaaaatgcctggaatg
accacagcagtagccgctgccccccccacagctggggctgcttccatacctgttacagga
tttctcttgaacctgaagccccttgccacaacaagcgtggctgcttccacctccactgca
accaccacaactggcatgactccccctgtgatgacctatgcccagctggagagcctgatt
aacaaatggagcctggaactggaggaccaggagaagcacttccttcagcaggctacccag
gtcaatgcctgggacaggacattgattgaaaatggagaaaagatcacaaccttacacaga
gaagtagagaaagtgaagctggatcaaaagaggctggaccaagagctggacttcattttg
tctcagcaaaaggagctggaagacttgttgatcccattggaggaatctgtgaaggagcag
agcggaacaatctacttgcaacatgcagatgaggaacgggaaaagacatacaagctggca
gagaacattgatgcccagttgaagcgcatggcccaggatctgaaagatatcattgagcac
ctgaacacctctgggggccctgctgacaatagtgacccccttcagcagatttgcaaaatt
ctgaacgcacacatggattctttgcagtggattgatcagaactcagctctactgcagagg
aaagtggaggagatgaccaaggtctgcgacagccgccggaaggagcaggagcgcagcttc
cgcatcaccttcgattga
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