Pituophis catenifer annectens (San Diego gophersnake): 139323171
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Entry
139323171 CDS
T11059
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139323171 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139323171 (LSM1)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139323171 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
139323171 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Nicastrin
Motif
Other DBs
NCBI-GeneID:
139323171
NCBI-ProteinID:
XP_070808520
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MRTNSPPGSGPLLSPRPAGACASGPGGERPRAGSASPRADAGGGASAASGGKMNYMPGTA
SLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRG
ENVVLLGEIDLEKESDTPLQQVSIEEILEIQRVEQQTKQESDKLKMQALKERGLSIPRAD
TLDEY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccaactcgccgccgggctcgggtccccttttgtctccccgccccgccggagct
tgtgcttccggaccgggcggggagaggccaagagcaggttccgcttctcccagggccgat
gcgggcggcggagcttccgctgcgtccgggggaaaaatgaattacatgccgggcacggcc
agcctcatccaagatatcgataagaaacacttggtcctccttagagatggcagaacattg
attggatatttacgcagcattgatcaatttgcaaatctggttttgcaccaaacagtggag
cgcattcatgtgggcaaaaagtatggtgacatccctcgtggcatcttcgtagtcagaggc
gagaatgttgtactcctgggagaaattgacctggaaaaggaaagtgatacccctttgcag
caagtctcgatagaggaaatcttggaaattcaacgggtagagcagcaaacgaagcaagaa
tcagacaagttaaaaatgcaagcgctgaaggagcggggcctctccattccaagggctgat
acgttagacgaatactaa
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integrated database retrieval system
