Pituophis catenifer annectens (San Diego gophersnake): 139323188
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Entry
139323188 CDS
T11059
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139323188 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139323188 (RAB11FIP1)
Membrane trafficking [BR:
pcae04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139323188 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
139323188
NCBI-ProteinID:
XP_070808545
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MSLPGSPSSPAPRWAPTHVQVTVLQARGLRSKAKGGGGGSDAYAVMALGKEKFATSVAER
CLGSPVWREEATFELPSLPRRGLGVAGGPGPNAVLQLSVLHRALLGLDKFLGRAEISLGE
LQSEGGRRSTRWYKLHSKPGKKEKERGEIEVDIQFMRSNMTASMFDLSMKDKPRTPFSKL
KNKLKGKRGNGLPDTASAIIPSITHSPADSEEESNEKEKKKSKFKTLFSKPGLHKSNISQ
SMSVLPTLQPVSERVRLRPSDFQSQWSDDEDDDTLTTVSEKPSANRTNNNVLGPPSVMTH
KRTGSGDSKQLNQIIAGSAKKDMHSLFGLRSKNDPVSRSNLCINGSHVYMEENESKSDLV
SKEGTPSSPQTSQRKRLFLSQENLSFEHDKELENSARLALDKLPSGSLESFKAMTLPSYK
LLAGGDLVENNTQFVSDTPKETKEIKKQENKKSGLLSLVTGKKETKSSEELGNTESSLKA
KEVKRNEKELARKEANPSELPVDGKRGHGPPKSNAIDVVIAKTSTNPFSENIVEGEKPEK
NAASVKPSQTKPVKPRLGVSSEDETKATSFPPVPLPPTCYPSNNENNPFTSKFDVEQKTR
EVGTFDSSKNVSVNNPFTTKWMQDSRDLECSAVSICLPSTSGRENNPFTPKCGQEFQEME
TSSLYSLHSAASITETHTIPSQLSNINDPFVIKVGQESERIKGPPTSINSVSLTGNIDNS
KYTDVSSEKFQNENLTVQTDTTSNFSGSLSESLPPQSSDLVRVNQKASYDKVHIVLPFKE
NNGMKKSVAFALDESKVDVISSHNDRADEDSFEVNENKETLNSFEKNSVQVIELNIENSC
GSKPDEEDIISVHTSGNPLEKEVESGFSKKEPLVPIARVLIPLQSKMSVPEQSDQTHTVP
PKPAPRNGLKVKKCVPLSDEPKGDDVSSQSSVLKEVSSDNSTFSEKPSHICSLTSEMAVL
PHRYDNGNTDPSQSIKDDSNHMMRTSLGISGPGELNVKPITLPVIPEVASDDEQLGDYQQ
NPVSMTLSEDLSRNEDGFMNLWASAERTDLTSTKKAIGETVSGLMQMSNFGNSSNRLLKD
TANNVHKNPTHNLIGIEKECGEHSTKDRQDDCPESSAKPVSLYPLSDSSQSCSVSSFQSD
SHGFNKAESPKKATAEELDAKVESSGRKKLLQAWVSPSETHPNPGGNSAKLRLHPVKPMN
ATTNQPSAKTLSINTKMLDNQTEINLKKYDRSDPAYAYAQLTHDELIQLVLKQKDILAKR
DVQVRELEDYIDNLLVRVMEATPNILRIEVHPKKKAGKM
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgggctccccgagctctccggccccgcgctgggccccgacgcacgtccaa
gtgacggtcctccaggcgcgggggctgcgctccaaagccaagggcggcggcgggggcagc
gacgcctacgccgtcatggcgctgggcaaggagaagttcgccacctcggtggccgagcgc
tgcctcggctcgcccgtgtggcgggaagaagccaccttcgagctgccctcgctgccccga
cgaggcctgggcgtggccggcgggcctgggccgaacgccgtgctgcagctgagcgtcctc
caccgcgcgctgctcggcctcgacaagttcttgggccgcgccgagatcagcctcggcgag
ctgcagagcgaaggcggccgccgcagcacccgatggtacaagcttcactccaaaccaggg
aagaaggaaaaagagcggggtgagattgaagtggatatccagttcatgaggagcaacatg
acagccagtatgtttgatctgtccatgaaggataagcctcggactccctttagcaaactg
aaaaacaaattaaaagggaaaaggggcaacggattgccagacacggcttcagccattatt
cctagcattactcactctccagctgacagtgaagaagagtcaaatgagaaggagaagaaa
aaatcaaaattcaagacactgttctctaaacctggtttgcataaaagcaatatttcccag
tccatgtctgtgctacccacactccagcctgtttcagagagagttcgacttcgacccagt
gactttcagtcacagtggagtgatgatgaagatgatgacactttgacaacagtctctgag
aagccctctgcaaacagaaccaacaataatgtacttggtcccccttctgtcatgacccac
aagagaactggtagtggagactccaagcaattaaaccaaataattgctggcagtgctaag
aaggatatgcattctttatttggcctcagatccaaaaatgacccagtttccaggtccaat
ctgtgtatcaatggtagccatgtttacatggaagaaaatgaatcaaagagcgacctcgtt
tcaaaagaaggcactccatcttctcctcagacatcccagcgaaaacgcctctttttgtct
caggaaaacctctctttcgaacatgacaaggagcttgaaaactctgcaaggttggccctt
gataaattgccatctgggtcgttggaatcctttaaagccatgactctgccatcgtataaa
ttgcttgctggtggagatttagtagaaaataacactcaatttgtttcagacactccaaaa
gaaaccaaggagatcaaaaaacaggagaacaagaagtctggcttgctgtctcttgtgaca
gggaaaaaagaaacaaaaagcagtgaggagttggggaacactgaaagttccctgaaagcg
aaggaagtgaagcgtaatgaaaaagaattggccagaaaagaggcaaacccttctgagctc
cctgtggatggcaaaaggggccatggcccacctaagagtaatgccatagatgttgtcatt
gcaaagacatcaacaaaccctttcagtgaaaacattgtggaaggagagaaaccagaaaag
aatgccgcttctgtgaaaccttctcagacgaaacctgtcaaacccagattgggcgtgtct
tcagaggatgaaaccaaagccacctcttttcctcctgttcctcttcctcctacttgctat
ccttcaaataatgaaaataatccttttacttctaaatttgatgtagaacagaaaactcgg
gaagttggtacgtttgatagctcaaagaatgtttctgttaataatccgttcactacaaaa
tggatgcaggattctagagacctggaatgctctgcagtttctatctgccttccttcaact
tctggccgtgaaaataatcccttcactcctaaatgcggccaagaatttcaggagatggaa
acctcttccttatattctctacattctgcagcttccattactgaaactcatactattcct
tctcagctttctaacattaatgatccctttgtaatcaaagtaggacaggaatctgaaaga
attaaaggtcctcccacatctataaattctgtttctttaaccggaaacattgataattcc
aagtacactgatgtttcttcagaaaagtttcaaaatgaaaacttaactgttcaaacagat
actacatccaacttctctggctctctatctgagagtcttccaccacagtcttctgaccta
gttagagtgaaccaaaaagcctcatatgacaaagtgcatatagtactgccttttaaagaa
aataatgggatgaaaaagtcggtagcctttgccctcgatgaatcgaaagtggatgtaata
agtagtcataatgaccgtgcagatgaagattcatttgaggtaaatgaaaataaagaaaca
ctaaattcatttgaaaagaatagcgtccaggtaattgaattaaacatagaaaatagttgt
ggctctaagcctgatgaagaagacataatttctgttcatactagtgggaaccccttagag
aaagaagttgaatctggcttctctaaaaaggagccactggtaccaattgcaagagtcctc
attcctctgcaaagcaaaatgtcagttcctgaacagagtgaccaaacacatactgtgcca
ccaaaaccagcaccaagaaatggtttgaaagtgaaaaaatgtgtacctctatctgatgaa
ccaaaaggagacgatgtatcaagccagtcatctgttctcaaagaggtttcttcagacaat
tcaacctttagtgaaaagccaagccatatttgctcattaacttcagaaatggctgtcctt
cctcatagatatgataatggtaacacagatccatctcaaagtattaaggatgactctaac
cacatgatgagaacatcacttgggatttcaggtcccggagagctgaatgtaaagcccatt
actcttcctgttattccagaagtagcttcagatgatgagcaattaggtgattatcagcag
aatcctgtaagtatgacattaagtgaagatttgtcaagaaatgaagatggctttatgaac
ttgtgggcttctgctgagaggacagatctgacatcaactaagaaagctattggagagact
gtatcaggtcttatgcaaatgagtaattttggcaattcatccaacagattgttgaaggat
acagccaacaatgtacataaaaacccaactcataacctaataggcatagaaaaggagtgt
ggagagcactctaccaaagataggcaggatgattgtcccgagtcttctgctaagcctgtt
tctctttaccctctgtctgattcttctcagtcttgctctgttagttctttccagtctgat
tctcacggctttaataaagcagaatctccaaaaaaggctacagcagaagaattggatgcc
aaagtggaaagctctggcaggaagaagctgctgcaggcatgggtttcaccctctgaaaca
catcctaatcctggtggaaattctgccaaactcagacttcatcctgtgaagccaatgaat
gctacaactaaccaaccatctgcaaaaaccttgagtataaatactaagatgctggataat
caaactgaaatcaatctaaagaaatatgaccgttcagatcctgcctatgcttatgctcag
ttaactcatgatgaactgatccaactggtcttgaaacaaaaagatattcttgccaagcga
gatgtccaggtacgagaactggaagactatatagataacttacttgttagagtcatggaa
gcaacccccaacattcttcgaattgaagtccaccccaaaaagaaagctggaaagatgtaa
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