Pituophis catenifer annectens (San Diego gophersnake): 139323271
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Entry
139323271 CDS
T11059
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139323271 (DSCAML1)
Cell adhesion molecules [BR:
pcae04515
]
Immunoglobulin superfamily
Other
139323271 (DSCAML1)
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
139323271
NCBI-ProteinID:
XP_070808671
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Position
Unknown
AA seq
1917 aa
AA seq
DB search
MRGNVAVFKCLIPSSVQEYVNVVSWEKDTVSIISENRFFITFYGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVSDPAESIPTILDNFQDQEAKVGQLVELPCIASGYPNPA
IRWVKDGRPLPADSRWTKRITGLMISDLRVEDSGTYICEITNTFGSAEVTGTLEVIEPLR
VTLTPKKLKTGIGSTVILSCALSGSPEYSIRWFRNTELVVPDDFVSIRGIHNETLLITAA
QKSHSGAYQCFATRKVQTAQDFAVIVLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPP
PTITWSLDDEPIQRDGSHRTNQYTMSDGTTVSHMNVTGPHIRDGGVYRCTARNSVGSAEY
QARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFEN
GTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVIVSGSGITIESKEFMSSLQISSVSLKHNGNYTCIASNAAA
TISRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGQAKELNCTARGERPIIIRWEKGDTVIDPDRNVRYAIATKDNSDEVISTLKLKP
AERGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSI
ITGFDIEYKNKSDSWDFKQSTRNISPSINQANIVDLHPASVYSIRMFSFNKIGRSEPSKD
LTISTEEAAPDGPPLDVTLQPMTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSSGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPEN
VRALSITSDVAVISWSEPPRSTLNGILKGYRVIFWSLYMDGEWGEMQNVTTTRERAELRG
MEKFTNYSVQVLAYTQAGDGVRSNVLHIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPSK
PNGVIRKYTIFCSSPGSGQPLQACSPSVLLQAPSEYETSPEQLFYRIAHLNRGQQYLLWV
AAVTSAGRGNMSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCSSVGDPLPAVKWTK
DSDDSAIPVILDGHRQIQSNGTLILRSVKAEDSGYYTCTATNTWGFDTIIVNLLVQVPPD
QPRLMVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVLIASAERSFKLGSL
KCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFNKDQHLFTHINSTHARLSLQGWNN
GGCPIVAIVLEFRPKSTWVWQSLRANYSSEVFLTDLHEATWYELRMKACNSAGCGNETLQ
FATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFVVRKKRKEKRLKRLR
DAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGDDKATVPVS
DPEFNQTVNPQTFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSTHSARNRYS
SQWTLTKCQASTPARTLASDWRAVGSQHGITVTESDSFSASLSQDTDKGRNSMVSTESAS
STYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPG
ICRFTASPPKPQDSDRGKGVAVPIPHRANKSDYCNLPLYMKSETFFRKPDLQDPCPVVPP
REASIRNLARAYHTQARHLTLDASSKASAAPHATAATTLPQRTLAMPGSASGAPPAASTA
APAPAPEPSPGPVAEPRLPTHSKIGGSKDSLLEMSTSGVGRPQKQGTGAYSKSYTLV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaaacgtggcggtttttaagtgcctcattccttcttcagtgcaagaatatgtt
aatgttgtatcctgggagaaagatacagtttctatcatctctgaaaataggtttttcatt
actttctatggtgggttgtacatatcagacgtccagaaggaagacgccctgtccacctat
agatgcattacaaagcacaagtatagtggggagacgcggcagagcaatggtgcccgcttg
tctgtctcagacccagcagagtccatcccaaccattctagacaacttccaggaccaggaa
gcaaaggtggggcaactagtggaattgccatgcattgcctctggatacccgaatcctgcc
atccgatgggtaaaggatggaaggcccctgcctgctgacagtcgatggaccaagcgtatc
acaggcctgatgatcagtgatttgcgtgtggaagacagtgggacctacatctgtgaaatc
acaaacacttttgggtctgctgaggtcactgggaccctggaagtaattgagccactgcga
gtcaccctcacaccaaagaagctaaagactggtattggaagcactgttatcctctcgtgt
gcactttctggctcaccggaatactccatccgttggttccgcaatacggagctggtggtt
ccagatgacttcgtctccatccggggaatccacaatgagacgttgctcatcacagctgcc
caaaagagccactcaggggcctaccagtgttttgccaccagaaaggtccagacagctcag
gactttgctgtaattgtcttggaggatgggaccccccggattgtctcctccttcagtgag
aaggtggtgaaccctggtgagcagttctccctgatgtgtgcagccaagggagcccctccc
cccaccatcacctggtccttggacgatgagcccatccagagagatggcagccaccgcacc
aaccagtacaccatgtccgatggcaccactgtgagccacatgaatgtgacaggcccacac
atcagggatggaggcgtctaccgatgtactgcgcggaactcggtgggcagcgccgaatac
caagcgcgaataaacgtaagaggccctcccagcatccgtgccatgaagaacatcacagct
gtggcaggccgggacaccttcatcaactgcagggtgattggctacccatattactcaatc
aagtggtataaggactcattactcctgccggataaccaccgacaagtagtctttgaaaat
ggcactctcaagctgatggatgtccagaaggggatggacgaaggagaatacctttgcagc
gtcctcattcagccgcagctctctatcagccagagtgtccatgtcactgtgaaagttcct
cctctgatccagccctttgagttccctccggcttccattgggcagcttctgtacattcca
tgtgtggtctcttctggcgatatgccgatccgcatcacttggaggaaggacgggcaggtg
attgtctcaggctctggcatcaccatcgagagcaaggagttcatgagctccttgcagatc
tccagcgtctccctgaagcacaacggcaactacacctgcattgctagcaatgctgctgcc
accattagccgagagcggcagttgattgtgcgagtgcctcctcgttttgtggtccagccc
aacaatcaagatgggatctatggcaaagctggggtcttgaactgttcagtggatgggtat
ccccctcccaaagtcatgtggaaacatgctaaaggcagtgggaacccccagcagtaccac
cctgtccccctgacaggccgcatccagatcctgccaaacagttcactgctcatccggcat
gttttagaagaagacatcggctattatctgtgccaggccagcaacggggttgggacagac
atcagcaagtccatgttcctcaccgtgaagatcccagctatgatcacctcccaccccaac
accaccatcgccatcaagggccaggctaaagagctgaattgcacagctcgtggtgagcgc
cccattataattcgttgggagaaaggggacaccgtgatcgatcctgaccgaaacgtccga
tatgccattgctacgaaggataatagtgacgaggtcatctcgaccctcaaactcaagccc
gctgaacgaggagactctgtttttttttcctgccatgcgatcaactcctatggtgaagac
cgaggacttattcaacttactgtacaagagccaccagaccctccagaactggagatccga
gaagtgaaagcccgcagtatgaatttacggtggactcagaggtttgatggcaacagcatc
atcacaggctttgatattgagtacaagaataagtctgattcctgggattttaagcaatct
acccggaacatctctccctccattaaccaggccaatattgtggatcttcacccggcctct
gtatatagcatccgcatgttttcattcaacaagattggccgcagtgagccaagcaaggac
ctgaccatcagcacggaggaagcagctcctgatggtcccccgctggatgtcaccttgcag
ccaatgacatcccaaagcatccaggtcacctggaaggccccaaagaaagaactccagaat
ggggttatccgaggctaccagattggctatcgggagaacagcccaggaagcagtgggcaa
tatagcattgtggagatgaaggccacgggggacagtgaagtctatacccttgacaacctg
aagaaatttgcccagtatggtgtggtggtgcaggcctttaaccgggcaggcaccggcccc
tcgtccagtgaaatcaatgccaccacgctggaggatgttcctagccagccccctgaaaat
gtgagggcgttgtccatcacctccgatgtggccgtcatctcatggtctgaaccccctcgg
agcactctcaatggcatcttgaagggctaccgtgtcatcttctggtctctctacatggat
ggtgaatggggggagatgcagaatgtcaccaccactcgggagcgagcagagctgcgcggc
atggagaagttcaccaactacagcgtgcaagtcctggcctacacccaggcaggggatggg
gtccgcagcaacgtcctccacatccagaccaaggaagacattcctggtcctcctgccggg
atcaaagcggtgccttcctctgccagcagcgtcgtggtgtcttggctgccaccttcaaaa
cctaatggagttatccggaagtataccattttctgctccagcccaggctctggccagccg
ctgcaggcctgttctccttcggttcttctgcaggctcccagcgagtatgaaacaagcccg
gagcagctgttctatcgcatcgcacacctgaaccgcgggcaacagtacctgctctgggtt
gctgctgtcacttccgcagggcggggcaacatgagcgagaaagtcaccattgagcctgct
ggaaaagctccagccaagatcatctcatttgggggcacagttacgaccccgtggatgaaa
gatgtgcgactgccatgcagttcagtgggggatcctctcccagctgtgaagtggactaaa
gacagtgatgattcagctattccagtcattttggatggtcatcgccagatccagtccaat
ggcaccctgattctgcgctctgtgaaagcagaggactcaggctattacacttgtactgcc
acaaatacctggggattcgataccatcattgtcaacttgctggtgcaagtccctccagac
cagccccggctgatggtgtccaagacttcagcttcatctatcaccttggcctggatccct
ggtgacaatggtggcagctccatccgaggctttgtgctccagtactcagtggataatagt
gaggagtggaaggacgtgttaattgcttccgcagagcgctccttcaagctgggcagcctg
aaatgcgggacctggtacaaggtgaagctggcagccaagaacagcgttggagctggtcgt
atcagtgagatcattgaggccaagacccacggcagagaaccatctttcaataaggaccaa
catctgttcacccacatcaactccacccatgccagactgagtctgcaaggctggaacaat
gggggctgccccattgtagcaattgtcctggagttccgacccaaaagcacctgggtttgg
cagagtctgcgggctaattattccagtgaagtctttctgactgacctgcacgaagccact
tggtatgaactgcgcatgaaagcatgcaacagtgccggctgtggcaatgaaaccctgcag
ttcgccaccctggactacgatggcagcaccattccacctattaagtctgcgcaaggggaa
ggagatgatgtcaagaagcttttcaccatcgcttgccctgtcatcttggccacacttggc
gttgcgttgctgtttgttgttcgaaagaagcggaaggaaaagcgcctgaagcgtttgcga
gatgccaagagtttggctgaaatgctcatcagtaagaataatcgtagctttgatacgccc
gtgaagggtcctccgcaaggccctcggctgcacatcgacatcccccgggttcagctgctc
attgaggacaaggagggaatcaagcagatcggagatgacaaagcaacagtcccagtctct
gacccagaattcaaccagactgttaatccgcagaccttctgcacaggggtatcgctacac
cacccagcactgatccagaatacggggcctttgattgatatgtctgacatccgccctggc
acaaatcctgtttcaaggaaaagtgtgaaatctacacacagtgcccggaacagatactcc
agccaatggactctcaccaagtgccaggcctccacgccagcacggactctggcctctgac
tggagagcggttggctcccagcatggcatcacagtgactgaaagtgacagtttcagtgct
agtttgtcccaggacacagacaaaggccgaaacagcatggtgtccacagagagtgcctca
tccacttatgaagagttggctcgggcttatgaacatgccaagttagaggagcagctgcag
catgccaagtttgaaatcacagagtgcttcatttctgacagctcctctgaccagatgacc
actggcaccaatgagaatgctgacagcatgacttccatgagcactccctccgagccaggc
atctgccgtttcacagcctctcctcccaaaccacaggacagtgaccgtggcaagggtgta
gctgtgcctatccctcaccgagcaaataaaagtgactactgcaacctgcctttgtatatg
aaatctgaaacgttcttccgcaagccagaccttcaagacccttgtcctgtagtgccaccc
cgggaagcctccatacgaaatctggctcgggcttaccacacacaagccagacacttgact
ttagatgccagcagcaaagcctcggctgcgccacacgcaactgcagccaccaccttacct
cagagaactcttgccatgccaggctcggctagtggtgcccctcctgctgcttccactgct
gctcccgccccagcccccgaacctagcccgggtcctgttgctgagccacgcttgcctacg
catagcaagattggggggtccaaagactcactattagaaatgagcacatctggcgtaggg
aggccacagaagcagggaactggtgcctactcgaaatcctatacgctggtgtag
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