Pituophis catenifer annectens (San Diego gophersnake): 139323406
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Entry
139323406 CDS
T11059
Symbol
IRX3
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139323406 (IRX3)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139323406 (IRX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139323406
NCBI-ProteinID:
XP_070808845
LinkDB
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Position
Unknown
AA seq
506 aa
AA seq
DB search
MAFSQLGYQYIRPLYPTDRQGNNGGGGGGSRNGADLSPAGSLCGVLSSMYGAPYAAAAAA
QGYGAFLPYAAELPIFPQLGAQYELKDSPGVQAAAFPAPHPAFYPYGQYQFGDPSRPKNA
TRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWA
PRSRSEDEEGTTYGSEDGEGEKRDPDDEEIDLENSDTEPSETNGAAAGAGAQAGQLLLHV
GEEEEEGREVSAEQEGAQPTALRLPSPREPRTGSSDTSEEEEEEEDEEESSDGLEELAGA
QERFLKAVEARRRASTGPPPLRSPSPLPQPVQPPKPKIWSLAETATSPDNPSRKSPPGGG
GGGGGSPPNAPQCLPQSAPGAAHRLVSACPLGKFAGWSXGRPFSAAPPHASHPLTLLNTP
HLLGLAGGNSSTAPAAAAAAAAAAAAALAAFSRPADQAPSXEACGTDRSSALDVEKKLIK
TAFQPVQRRPQNQLDAAMVLSALSSS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcccagttgggctaccagtacatccgcccgctctacccgacggaccgccaa
gggaacaacggcggcggcggcggcggttcccgcaacggggccgacctcagcccggccggt
tcgctctgcggcgttttatcttccatgtacggcgcgccttacgcggcagccgcggctgct
cagggctacggggccttcctgccttacgcggccgagcttcccatcttcccgcagctgggc
gcccagtatgagctgaaggacagtcccggcgtccaagccgcggccttcccggcccctcac
ccggctttctacccttacggccagtatcagttcggcgacccctccaggcccaagaacgcc
acccgcgagagcaccagcacgctgaaggcctggctgaacgagcaccgcaagaacccctac
ccgaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcactcaggtc
tccacctggttcgccaacgcccggcgccgcctcaagaaggagaacaagatgacctgggct
ccccgcagccgcagcgaggacgaggaaggcacgacctacggcagcgaggacggcgagggg
gagaagcgagaccccgacgacgaggagatcgacttggagaacagcgacactgaaccctcg
gagaccaatggagcggcggccggagccggggcccaagccgggcagctgctcctgcacgtc
ggggaggaagaggaagagggccgggaggtgagcgcggagcaggagggcgcgcaaccgacg
gcgctgcgcctgccttccccgcgggagccccgcacgggcagcagcgacacgtcggaagag
gaggaggaggaggaagacgaagaggagagttccgacggcttggaggagctggccggcgct
caggagcgcttcctgaaggcggtggaagcgcggcggcgcgcctcgacgggacccccgcct
ctccgcagccccagcccgcttccccagcccgtccagccgcccaaacccaagatctggtct
ttggcagagacggctaccagcccagataacccctcgcggaaatcgccccctggcggtgga
ggagggggaggggggtcccccccgaacgccccccaatgccttccccaatccgccccgggc
gccgcgcacagactggtctccgcctgcccgctgggcaaattcgccggctggtcgnngggc
cggcccttctcggccgcccccccgcacgcctcccacccgctaactttgctgaacactccc
catctcttgggactggcggggggcaactccagcacggcgcccgcggcggcggcggcggca
gcagcggcagcggcggcggctctggcggctttttccagaccggcggaccaggcgccgagc
ngcgaagcctgcggaacagatcgatctagtgccttggatgtagagaaaaagttaataaag
acagctttccagccagttcagaggcggcctcagaaccaacttgatgcagcaatggttcta
tcagcgttgtcatcatcctag
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