Pituophis catenifer annectens (San Diego gophersnake): 139323535
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Entry
139323535 CDS
T11059
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04137
Mitophagy - animal
pcae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139323535 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139323535 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139323535 (AMFR)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
139323535 (AMFR)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139323535 (AMFR)
Multi subunit type E3
ERAD complex
139323535 (AMFR)
LMBR1L-GP78-UBAC2 complex
139323535 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
139323535
NCBI-ProteinID:
XP_070809030
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MPLLFLERFPWPSLRVYAALSALALLGCLLSAHSALRQAETPEPGPGPPEGGQAALEPPP
PPPPPPLSLPPGHGPAALDLAYYLLSDGLCVWVLVNTACCILMLIAKLIQTIVFGPLRVS
ERQHLKDKFWNFIFYKFIFIFGVLNVQTVDEVIMWCLWFSGLVFLHLMVQLCKDRFEYLS
FSPTTPLNSHIRVLTLLVVMLLSCCGLAVVCGIIGYAHGMHTLSFMAAESLLVTVRTVHV
ILRYIIHLWDLNHEGTWESKGTYVYYTDFIMELMLLSLDLMHHIHMLLFGNIWLSMASLV
IFMQLRYLFHEVQRRLRRHKNYLRVVGNMEARFAVATPEELASNNDDCAICWDSMQAARK
LPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNQQAPEDHPRENLDENLPPVAAAEGRP
HLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNLLGIAQASNSQLNAMAHQIQEMFPQVPY
HLILQDLQLTRSVEITTDNILEGRIQVPFPTQRSDSIRPALNSPVERQNTDQEDAEEEME
TERIPLELRSRLEDTAEFNEMMEAEAAQTEDFEVRGSRFSKSADERQRMLVQRKEDLLQQ
ARRRYLNKSFDDPTPDFPSQAEGAASDSITLRRRMLAAAAERRLQKQHPS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctggagcgcttcccctggcccagcctgcgcgtctacgcggcgctc
agcgccctggccctgctgggctgcctgctcagcgcccacagcgccctccgccaggccgag
acccccgagcccggccccggcccgcccgaagggggacaagcggccctcgagcctcccccg
ccgcctccgcctccgccgctgtcgttgccgccgggccacggccccgccgcgctggacctc
gcctactacctgctctccgacggcctctgcgtctgggtgttggtgaatacggcctgttgc
attctgatgctgatagcaaagctaatacagaccatagtgtttggtcccctacgtgttagt
gaaaggcagcatctcaaggataagttctggaacttcatcttctacaagtttatttttatt
tttggggtgttaaatgtccagactgtggacgaagtgatcatgtggtgcctctggttttct
ggactcgtcttcttacatctcatggttcagctttgcaaggataggtttgaatatctgtct
ttttcacctaccaccccgttaaacagccacattcgggtcctgacgctgctggttgtcatg
ctgctttcctgctgtggcctcgcagtagtgtgcggcatcattggctacgcacacggaatg
cacaccctatccttcatggcggcggagtccctgctggtcaccgtaagaaccgtgcatgtg
attttacgttacatcattcatctctgggatctgaatcacgaaggcacctgggagagcaaa
ggcacctatgtttattacaccgatttcatcatggagctgatgctgttgtccctggatttg
atgcatcacattcacatgctgctgtttggcaacatttggctgtcgatggccagtctggtg
atcttcatgcagctgcgttacctgttccatgaagttcagcgcaggctgcggcgccataag
aattacctgcgggtggttggaaacatggaagccaggtttgcagtggcaactcctgaagaa
ttggcctccaacaacgatgactgtgccatttgctgggattccatgcaggctgcccggaag
ctcccttgcggccacctcttccataactcatgcctgcgctcctggctcgagcaagacacc
tcctgcccgacctgtaggatgtcactgaatattgcggacaaccagcaagctccagaggat
cacccaagagagaacctggatgaaaacttgccccctgtggcagcagccgaaggaagacct
catctcaaccagcacaatcacttcttccactttgacgggtctcgcattgctagctggctc
ccgagcttttcggtcgaggtgatgcacaccaccaacctccttgggatcgctcaggccagc
aactctcagctcaatgccatggcccatcaaatccaggagatgttcccccaggttccttac
cacctcattctccaggacctgcagctgacacgctcggtagaaataacaacggacaatatt
ttagagggacgcatccaggtgcctttcccaacacagcgttctgacagtatccgaccagca
ttgaacagtcctgtagaaagacagaataccgatcaagaagatgctgaggaggaaatggag
acggaaaggatccctcttgaactcagatcaaggctggaagacacggcggagtttaatgaa
atgatggaagcagaagcagcccagacagaggacttcgaagtgagaggcagccgcttctcc
aagtcggcagacgagaggcagcgaatgttggttcagaggaaggaagacctgttgcaacaa
gcacgcaggcgctaccttaacaaaagcttcgatgatcccacgccggactttccctcccag
gctgaaggagcagcctccgactccatcactttacgacgcaggatgttggccgccgccgcc
gagcgaaggttacagaaacagcatccgtcctaa
DBGET
integrated database retrieval system
