Pituophis catenifer annectens (San Diego gophersnake): 139323628
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Entry
139323628 CDS
T11059
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein
KO
K10888
fanconi anemia group A protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
139323628 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139323628 (FANCA)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
139323628 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_CTD
FANCA_helical
Motif
Other DBs
NCBI-GeneID:
139323628
NCBI-ProteinID:
XP_070809155
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MAGRALSALLAGRCERQKRGAGTQQELREAALRIWSRHQRLDELLLENGSSAHGKSILSS
NLGRSGSKMSVPEQFVVTALKDEASVLGMPAGILSARMAANLIEKISMESDQTTLLSAEH
RKKLFCLFQSLKELLTYNAFCHSVFAQEMWKMQRPPILEVAWHLHRENIVPLEELLEKNL
EVPALVDWLSSSLCLLCHQMEEMDTEIGQNILTDLALVLLQNGFPKTPESEKKVEMKKVS
EICCAVLERMLAWVLDTVATEKQGSASPTGKAVRCWLQVYSLVVFQGMAPPESLQPLFGH
IFTRVLTYNPHLTVSDAIHLQREWSFARTSLLLATLYRKVFVAFQPEELTRRLQQVLETS
EVNWHHVLSCVSTLLVCHSQADQLVKDLLGGLLRKAFANYDLESLITTFLIARQAALEGP
ALFPPYAEWFKLTFGNGSSLHGSSKKALIFFFKFLSQLVPFEAPQYLKVHLLHPPFVPSK
YRSLLLEYITLAKTRLADLKVSLEDMGLYENLSSTKEASQPSCQALRDVEKAIQIFRNTG
KIPASVMEASIFRRSYYVSRFLPALLVPRVLPETPDTRMTLIEALKRAEKISPNAYATYL
EECEAAKRKPLREGSAEKEVGGPKEPLERLKAELEALRLLVTDANKHGAIPAQIAVISGK
LMEVLGHVTDDDEAASLTLRVRLDLSAPEVGAADQGAVDLLLASFCQDVMAASFFLPPDR
QGPWPSLFVKMICGHRPLLSSLLSRLCQLLYHQGPSLSDAHVLGLAAFVVHFNEAEPLLP
PVDLCFPSVPQAALHTDLPLAGLWDYLLAPRSGDSALFCLRFCTAAISYFLCKFPSLSHE
HLCSVLHPGFMKKLQYVLPRLCLEARETGYEGDSAAFPWKMLSCLPPCYQKAALGLWKQT
RFQELLREEAFQLTLPEWLKMELQVLPDQDLLSANERQEFHSWSLHQHYLPRSVAAGGCG
GDLTEMGALFISAILDFLQSSRTETEACSLQTNPKCSLTPARGNPDLYCRFQELVLELEL
ERRRGMKEHFLFQVFRERLRALGTGAALGDRLLRQQELLSQTRILLSLPPSVLVATQKRG
GEIVVACEGFFSFVNTELRNSCSRGCSLPYDITAHFFRGLLSTSLECSHPAREVTAVLSS
CQTRCPILLCSAARWWPRLEFVLCSQWKRLFGAPLAQGLQSLKDLRSSLQSCLAWEAASL
PFNTAWVSAAFLHFTVQQQADPEEKGEVLRKLGPKTEQFLVYVLFFSVMDFISAKVAPQE
GTDVHKDLEWSSRVLQRLVEEGLGWLAVFCPAGKGCELYETLRDAVSDQHLKMLPVAFYS
LLFAFDVEKLIREQTFLPVALDMYAQLLQLFTERATMVGPSQKEQSLHICNLGDSLLLIQ
QARQLLLRAIPRYPPGSFSNLQEMLGLCGDLDPELKAALISTGGDLLEEGLLLF
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggccggtcgggccctttcagcccttctggcgggaagatgcgagaggcagaagagggga
gccgggacccagcaggagctgcgggaagcggccctgcgcatctggagtcggcaccagagg
ctggacgagctcctgctggagaatggaagttcagcacatggcaagtccatactttccagt
aacttgggcaggagcggaagtaaaatgtcagttccagaacaatttgtagtcacagccttg
aaggatgaggcctctgtgctgggcatgccagcaggaatcttatcagccagaatggcagcc
aaccttattgagaagatctctatggaatctgatcagactacattattgagtgcagaacac
agaaagaagttgttctgtttgttccagtccttgaaggaattattaacgtacaatgctttc
tgtcattcagtttttgctcaagaaatgtggaaaatgcagcgcccacctattttggaagtc
gcctggcacctgcacagagagaacattgttcctttggaagaattactggagaagaatctg
gaggtacctgccctggtggattggttgtccagtagcctttgcctcctgtgccatcagatg
gaagaaatggacactgagattggccagaacattctcacagacttggctctggtgctcctt
caaaatggatttccaaaaacacccgagtctgaaaagaaggtggaaatgaagaaggtttct
gaaatctgttgtgctgtgctggagagaatgttggcatgggtgctggatactgtagctacg
gagaagcagggcagtgcctcccccacagggaaggcggtgagatgctggctccaagtatac
agcctggtggttttccaaggcatggctccaccggagtctctgcagcccctcttcgggcac
atcttcacccgtgtgcttacctataatccccatctgacagtctcggatgccatccatctg
cagagggaatggagctttgccaggaccagcttgctgcttgctaccttataccgcaaagtc
ttcgtggcgttccagccagaggaactgactcggcgcttgcagcaggtcctggagacaagc
gaagtaaactggcatcacgtcctctcgtgcgtctctaccctcttagtctgccactcccaa
gcagatcagctggttaaagacctcctgggtggtctcttgagaaaggcctttgcgaattac
gatttggagagcttgatcactacgttcttaatcgcccgccaagcagccttggaaggcccg
gccttattccccccttacgcagaatggtttaagctcacttttgggaatggcagcagcctc
catggcagcagcaagaaggcgctcatcttcttcttcaagttcttgtcacagctggttccc
ttcgaagctccccagtacctgaaggtccacctcctgcatcccccatttgtgcccagcaag
taccggtccctcctgctggaatacatcacattggccaaaactcgcctggcagatctcaag
gtgtcgctagaagacatgggcctctatgagaatctctcttccaccaaggaagcctcccag
ccatcctgtcaagctcttcgggatgttgaaaaggccatccagatattccggaatactggc
aaaatcccagcaagtgtgatggaagccagtatttttaggcggtcctattacgtctcccgt
tttcttcctgctttgcttgtaccacgagtgcttcctgaaacccctgacactcgcatgact
ttgatagaagccctcaagagggctgaaaaaatctctccgaatgcctatgccacttacttg
gaagaatgcgaagctgctaaaaggaagcccttgcgagagggatcggctgaaaaagaggtg
gggggccccaaggaacccctggagcgactaaaggccgaactcgaagcgctgaggctactc
gtcacagacgcaaacaagcacggtgccattccggcccagattgcggtcatctctgggaag
ctgatggaggttttgggacacgtgacagatgacgatgaagcagcatccctgaccttgagg
gtcagactggatctttcggctcctgaagttggtgcagcagatcaaggggctgttgatctt
ctgctggcgtccttctgtcaggatgtcatggctgcctctttcttcctgcctcctgatagg
caagggccctggccttccctcttcgtgaaaatgatctgcgggcaccgccccctcttgtcc
tccttgctgagccgactctgtcaacttctctaccaccagggaccttctctgagtgatgct
cacgtcctgggcctggctgccttcgtggtccatttcaacgaggccgagcccctgctcccc
cctgtggacctctgcttcccctcagttcctcaagcagctcttcacacagaccttcctctt
gctggactgtgggactatttgttggcacccaggtctggagattcagctctcttctgcttg
cggttttgcactgcagcaatttcatactttctgtgcaagtttccttccctttcccacgag
cacctttgttccgtacttcatccaggcttcatgaaaaagctccagtatgtcttgccacgg
ctttgcttggaagcgcgagaaactggctacgaaggggactcggctgcgtttccttggaaa
atgctctcctgccttcctccctgctaccaaaaggctgccctcggcttgtggaaacaaacc
cgtttccaggaactcctgcgggaggaagccttccagctgactctccctgagtggttgaag
atggagctgcaagtccttcctgaccaagacctgctttctgctaacgagaggcaggagttc
cattcctggtctttgcatcagcattacctcccaaggtctgttgcagctggaggctgtggt
ggggacttgacagagatgggggcgctttttatcagcgccattctggatttccttcagagt
tctaggacagagacggaagcctgcagtctccagacaaaccccaagtgttccctgacccct
gcaagagggaaccctgatctctactgcagatttcaggagctggtgctggagctggagctg
gagcgcaggagaggcatgaaagagcacttcctgttccaagtgttccgggagaggctgagg
gctctgggaactggggctgctttgggagaccggctgctccggcagcaggagctgctgtcc
caaaccaggatcctcttaagcctgcctccgtctgttcttgtggcaacgcagaagagagga
ggggaaatcgttgtggcctgtgaaggctttttctcttttgtaaacacggaactgaggaac
agctgctccagaggatgctccctgccttatgacatcaccgcacatttcttcaggggcctc
ctgagcaccagtttggagtgcagccatcctgcccgagaggtgacagctgtgctgtcttcg
tgccaaaccaggtgtcccatccttctctgttctgctgcgcgatggtggccgaggctggag
tttgtgctttgctcacaatggaagagactgtttggtgctcctttggctcaggggctgcaa
agcctcaaggatttacggtcttctctccagagctgcctcgcatgggaagcagcttccctg
cccttcaacacggcctgggtctctgctgctttcctccacttcaccgtccagcagcaagcg
gatcctgaagaaaagggagaagtgctgagaaagttggggcccaaaacagagcagttcctg
gtctacgtcctcttcttttccgtcatggatttcatctcggcaaaagtggccccacaggaa
ggaacggatgttcacaaagatctggaatggagttccagagtgcttcagcgcttggtggaa
gaagggcttggctggctggctgtcttctgtccggcaggaaaaggctgtgagctttatgag
accctgcgtgatgctgtgtctgatcagcacttgaagatgctgccggttgccttctacagc
ctgctcttcgcctttgatgtggaaaagcttatcagagagcaaacattcctgcctgtggct
cttgacatgtacgcacaactgctccagctcttcacggaacgggccacgatggttggaccg
agccagaaggagcaaagtctgcacatctgcaatctcggagattcactactgctgatccag
caagcgcggcaactcttactccgggcaatcccccggtaccctccagggagcttctccaac
ctccaagagatgttgggcctctgtggggatctggacccagagctcaaggcagccctcatc
agcacaggtggggatttgctagaggaaggactcctgcttttctga
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