Pituophis catenifer annectens (San Diego gophersnake): 139323810
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Entry
139323810 CDS
T11059
Symbol
ACAN
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcae00535
]
139323810 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
pcae00536
]
139323810 (ACAN)
04091 Lectins [BR:
pcae04091
]
139323810 (ACAN)
Proteoglycans [BR:
pcae00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
139323810 (ACAN)
Glycosaminoglycan binding proteins [BR:
pcae00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
139323810 (ACAN)
Lectins [BR:
pcae04091
]
C-Type lectins
Lecticans
139323810 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
EGF_TEN
hEGF
Chordopox_A33R
I-set
Ig_3
EGF_3
EGF_CA
Motif
Other DBs
NCBI-GeneID:
139323810
NCBI-ProteinID:
XP_070809387
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MTTLLLACVCLHVIAAATSVDVLVDHSGTLSVSIPLRSPLRVSLGRTLTIPCYFIDTLGP
VTTAPNTPPVSPRIKWSKLSEDKEVTLLVAMDGQVRIHSAYKESVSLPNYPSIPTDATLE
IKTLRSNDTGIYRCEVIHGIEDSQDTVEVKVKGIVFHYRAISTRYTLNFEKAKQACIQNS
AVIATPEQLQAAYDDGFDQCDAGWLSDQTVRYPMHHPREGCYGDKDEFPGVRTYGVRDTD
ETYDVYCYAQEMEGKVFYATSAEKFTFSEAAEKCHSLGARLATTGELYLAWKDGMDVCSA
GWLADRSVRYPINKPSPICGGNLVGVRTVYLYVNQTGYPYPHSRYDAICYTDVGIHVIHD
NITDDSGDELGSGFTIQTFTETDIELELPRNTTEEEARGSIATLEPIDFTTTTVEVDEAI
TETPDLFPTGFTDETENRTEFGIWEDLENGTVSTLDTLFPTDIPETTSEEYISWPTATTE
SESASPFTVEEQIVPGTAASAVDQVPRKPTSPTGVIFHYRPSTNRYSLTFVEAQQACLSN
HAVIATPEQLQAAYEEGYEQCDAGWLNDQTVRYPIVVPRSKCSGDKENFPGVRSYGMRPA
SEKFDVYCYIERLKGEVFFATQTAQFTFLEAQRYCESQNATMASTGQLYAAWRLGQDNCQ
AGWLADGSLRYPIVHPRPTCGGEKPGVRTIYLYSNQTGFPDPQSKHHVFCFKAMPSLYGE
LDEDLIAVQTVPGVEEVPSGEETTVEMEFATDSDNQTEFWGTEVFPTDTSLLSVSPSAVS
QSTDLPIDAIPDETSSEAPITETSASGWTSGAPEITGTVEPSETPSGFGEFPSGVPEISG
LPSGESGLPSGDISGLSSGVIEVSTLPSGEEELSGISSVTQEEIPGLQEGKGIPEFSGLP
SGFSGGHSGIDPSGSPSGEYDYSGLTSGFPTVSLVNATLTEVVTTATEREMEGKGTIGVS
GDGDVSGFPSADWGVSGVTSGLPSGVDVYGTSDVSGFSSGIGISGNLSSTSDIGELPSGL
DVSGQSSGLLDISGLSSGIDFSGTSVGTPDLSGDVELSGQPSGIDGSGEPSGVTFIDTKL
FEVTTPSSKEEEGKGFVEVSELPSGDEDLSGTTPGILDVSGQPSSGQVDFSGWASGVSEV
SGLPSGLTDISGESSGIDLVSGTSSGTYDYSGLTSGFPTVSLVDTTLVEAVTQPSVAQEL
GEGTSGILEVSGLPSGQEETSGALYDVTTSSGASSEKVDFSGTPSGTPYFGRETDDLTDV
SGASSTTASASGDVSGFPEIILITDSIETVTRPTVSEQLIGGTESFHFHEPSVEASASGA
EVSTYPESTISSPEYHEISSKAFTFHETSVETPLFNETTDETSVSSKSHLETSTHYEPSG
ETSSLSESYSETSGTPFISGLPSGTFDERTQFNGDSSGPAPEAVSDTSDKGFSSDVLLRT
SSPDVALTEHSRLLTETQAETETSTYPTPELETRDGAAPGIPPPSPTATDLLPTVSSEMT
GGIQLITQATPKTCEEKLCGTGTCHEHEGNITCLCPTGFMGDYCEIDIDECHSNPCLNGA
TCVDGIHTFTCLCLPSYGGNRCDIDLAECETGWIKFQGNCYKHFEEKLTWMEAEKLCRKH
QSHLSSIITPEEQEFVNSNAQNYQWVGLSDRAVEDDFRWSDGHSLQYENWRPNQPDNFFA
KDEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVACGDPPAVENARHFGKKKDRYEINAM
VRYQCNQDYIQRHVPIIRCQSSGQWEEPRIACIDPSTYKRRLHKRSSWANGKMTA
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactactagcatgtgtgtgtttgcacgtcatcgctgcagccacctctgtg
gatgttttagtcgatcacagtggcacactcagcgtgagcatacctttacgttctcctctg
cgggtctccctgggaagaacgttgaccattccttgctactttatcgacactttggggcca
gtcaccacagctcccaacaccccaccagtgtccccaagaatcaaatggagcaaactatct
gaagacaaagaagttaccctcctagtggccatggatgggcaggtacggatccactctgcc
tacaaggagtctgtctctctacccaattatccttccataccaacggatgctactttggaa
atcaaaacactccggtccaatgacactgggatctaccgctgtgaagtcattcatggtatc
gaggatagccaggacacggtggaggtgaaagttaaagggatcgtgttccattacagagcc
atctctacccgctacacgttaaactttgagaaggcaaagcaggcatgcatccagaacagt
gcagtcattgcaactcctgagcagctccaggctgcctacgatgatggctttgaccaatgc
gatgctggttggttgtctgatcaaacagtcaggtacccaatgcaccatcctcgagaaggt
tgttatggtgacaaggatgaatttcctggagtgagaacatatggtgttcgagatacagat
gagacatatgatgtctattgttatgcacaggaaatggaaggcaaagtcttctacgccacc
tccgccgagaagttcaccttctcagaagcagcagagaaatgccatagtcttggggcacgt
ttggcaacaacaggagagttatatctggcctggaaggatgggatggacgtctgcagtgct
ggctggctggcagaccgcagtgtccggtatcccatcaacaaaccaagtcccatctgtggt
ggcaacctggtgggcgtacgtacggtgtatctttacgtcaaccagacagggtatccttac
cctcattcccgctacgatgccatttgctacactgatgttggcattcatgtcatccatgat
aatatcacagatgactctggcgatgaattgggcagtggcttcaccatccagacattcact
gagacagatattgagttggagcttccacgcaacaccaccgaagaagaagctcgaggaagc
attgcaaccttggaaccgatagactttactaccactaccgtagaggtggatgaagccatc
acagaaaccccagatctctttccaacaggtttcactgatgagaccgagaacaggactgaa
tttgggatctgggaggacttagaaaatggtactgtctcaaccctggatacactcttccca
accgatatcccggaaactacatcagaggaatatatttcatggcctactgccacaacagaa
tctgaatcagcctcaccatttacagtagaagagcaaatcgtgccagggacagctgcttct
gctgttgatcaagtccctcggaaacccacttctcccacaggtgttatttttcattaccgg
ccatccaccaacagatattccctgacttttgttgaagctcagcaagcttgcctaagcaat
catgctgttattgctactccagaacaactacaggctgcctatgaagaaggatacgagcag
tgtgatgctggctggctgaacgaccagacagtcaggtatcccattgtcgttccacgcagc
aaatgttctggagacaaagaaaacttccctggagtgaggtcatatggtatgcgcccagca
tcagaaaagtttgatgtctactgttatattgaaagactgaaaggtgaggtcttctttgca
actcagacggcacaattcaccttcttggaagcccaaagatactgtgagagtcaaaatgcg
accatggcttccactggacaactctacgctgcctggagactaggccaggataactgtcag
gcaggctggttggctgatggaagcctccgatatcccattgttcatccccgccctacctgt
ggtggagagaagcccggtgtgagaacgatttacttgtactccaaccagacaggattcccc
gacccacaatcaaagcatcacgtcttttgcttcaaagcaatgccatctctgtatggggaa
ctagatgaagacttaattgcagtccagacagtccctggtgtagaagaagttccttctggt
gaagaaacaactgtggagatggaatttgccactgattctgacaatcaaacagaattttgg
ggaacagaagtatttccaaccgatacatcactgttatctgtgagtccatcagctgtgagt
caatcaaccgatcttcccattgatgcaatacctgatgaaacaagctcagaagctccaatt
acagagacatctgcttctggttggacttccggagccccagagataactggaacggtcgaa
cctagtgaaacaccttcaggatttggagaatttccctctggagtccctgaaataagtggg
ctgccttctggagaaagtgggctaccatcaggagacatcagtggcctatcttctggggtt
attgaagtcagcaccttaccttctggagaagaagaattatcagggattagttcagtaacc
caagaagaaatacctgggctccaggaaggcaaagggatcccagaatttagtgggttgcct
tctggatttagtggaggtcattctggtattgatcccagtggctcaccatctggagagtat
gattatagtggtctcacatctggatttcctactgtgtctctggtgaatgccactttgacg
gaagttgtgaccacagcaacagaaagggaaatggaagggaaagggacaattggagtcagt
ggagatggagatgtatcagggttcccctctgccgactggggtgtaagtggcgtaaccagt
ggattgccctccggagttgatgtctatggaaccagtgatgtcagtgggttttcttcagga
attggtatcagtgggaatctatctagcacgtctgatattggtgaattaccatcaggactt
gatgttagtggacagtcatctggcttattagatatcagtggattgtcctcaggaattgac
ttcagtggaacctctgttgggacacctgatttaagtggcgatgtcgaattaagtggtcaa
ccttcaggtattgatgggagtggtgaaccttcaggtgttaccttcattgatactaaatta
tttgaagtgacaactccttcatctaaagaagaagaaggtaaaggatttgtagaagtaagt
gaattaccttcaggagatgaagatctatcagggactacaccaggaattttagatgtgagt
ggccagccttcttctggacaagtagacttcagtgggtgggcttcaggagttagtgaagtc
agtgggcttcctagtggactaacagacattagtggagaaagctctggcattgatctcgtc
agcggcacttcatctggaacatatgattatagtggtctcacatcagggtttcctacagtt
tcccttgtggatacaactttggtggaagccgtaacacagccatctgttgcacaagaatta
ggagaagggacatctgggatattagaagtaagtgggcttccttcaggacaggaggaaaca
tctggagcattgtatgatgtgacaacatctagcggagcatcatctgagaaagttgacttc
agcgggactccctcaggcactccatattttggtagagaaactgatgatctcactgatgta
agtggagcatcttcaaccactgccagtgctagtggtgatgtctctggattcccagaaatt
atcttaataactgattccatagaaacagtgacaagaccaacagtttcagagcaactgatt
ggaggaaccgagtctttccattttcatgaaccaagtgtggaagcctctgcatctggggca
gaagtttctacatatcctgaaagtaccatatcatccccagaatatcatgaaatcagtagt
aaggccttcacgtttcatgaaactagtgtagaaacccctttgtttaatgaaacaactgac
gaaacatcagtctcatcaaaaagccacctagaaacttcaacccattatgaaccaagtgga
gaaacgtcttcattatccgaaagttactcagaaacatctgggacaccattcatcagtggc
ttaccctctgggacttttgatgaaaggactcagtttaatggagacagttcaggtccagca
cctgaggcagtgtcagatacatcagacaaaggcttttcatcagatgtcctacttagaacc
agcagtccagatgttgcattaactgaacattcaaggcttctaacagagactcaggctgaa
acagagaccagtacatatccaacaccagagctggaaacaagagatggtgctgctccaggg
attccaccaccatcaccaacagctactgatctccttcctacagtttcatcggagatgacc
ggtgggatacagcttattacacaagctacacctaagacttgtgaagagaaactatgcgga
actgggacctgccacgaacatgaaggaaacatcacctgtttatgcccaactggatttatg
ggtgattactgtgagatagacattgatgagtgccactccaacccctgtctgaatggagct
acctgtgtcgatggcatccacactttcacatgcttatgccttcccagctacggagggaac
cgctgtgacattgatctggcagaatgtgaaacaggctggattaaatttcaaggtaactgc
tacaagcattttgaagagaaactcacctggatggaggcagagaaactatgccgaaagcat
caatcccacctgagcagtatcatcacacctgaagagcaagaatttgtgaacagcaatgca
cagaactaccagtgggttgggttaagtgaccgagctgtagaagatgactttcgctggtct
gatggacattctcttcaatatgagaactggcgacctaaccagccggataacttttttgcc
aaagatgaagactgtgtggtcatgatctggcatgagaagggtgaatggaatgatgtgcca
tgtaattaccacctgccgttcacttgcaagaaaggaacagttgcctgtggagaccctccc
gcagttgagaatgccaggcactttggcaagaagaaagaccgctatgagatcaacgctatg
gtgcgctaccagtgcaatcaagattacatacagcgccatgtgcccatcatccgatgccaa
tcaagtgggcagtgggaagagcctcggatagcctgtatagacccctccacctataaacgc
agactacacaagaggagctcatgggccaatggcaagatgacggcatga
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integrated database retrieval system
