Pituophis catenifer annectens (San Diego gophersnake): 139323845
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Entry
139323845 CDS
T11059
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139323845 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcae03310
]
139323845 (RORA)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139323845 (RORA)
Nuclear receptors [BR:
pcae03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
139323845 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139323845
NCBI-ProteinID:
XP_070809457
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MESAPAAPEPSAGEASGGGGPGEAEAAAAAAARDPPAGAEQARKGDAPPPPNRSRHSCSG
GRGGGGGGGGGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNA
TYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRM
QQQQRDHQQPPGEAEPLTPSYSITANGLTDLHDDLSNYIDGHSPEGSKGNSAVSSFYLDI
QPSPDQSGLDINGIKPEPVCDYTPTTGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHM
ETCQYLREELQQITWQTFLQEEIENYQSKQREVMWQLCAVKITEAIQYVVEFAKRIDGFM
ELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCEDFISFVFE
FGKSLCSMHLTEDEIALFSAFVLLSADRSWLQEKVKIEKLQQKIQFALQHVLQKNHREDG
ILTKLICKVSTLRALCGRHTEKLMAFRAIYPEIVRLHFPPLYKELFTSEFEPTVQMEG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggcgccggcagcgcccgagcccagcgccggggaagcgagcggcggcggcggc
cccggagaggcagaagcggcggcggcggcggcggctcgagatcccccggccggcgcggag
caagcgcggaaaggcgatgcgccgccgcctcccaaccgcagcaggcacagctgttccggc
ggcagaggaggcggaggcggcggcggcggaggcatttccgtaacgaagaagacacacaca
tctcaaattgaaattattccatgcaagatctgtggagacaaatcttcaggaatccattat
ggtgtgattacctgtgagggctgcaagggtttcttcaggaggagccagcagagcaatgcc
acctattcctgccctcgccaaaaaaactgcttaattgatcgaaccagcagaaaccgctgc
cagcactgccgcttgcagaaatgcctggccgtggggatgtcgcgagacgctgtcaagttt
ggccgcatgtccaaaaaacagagggacagcttgtacgcagaggtccagaagcatcggatg
cagcagcagcaacgagaccaccaacagccccccggagaagcggagccgctgaccccgagc
tacagcatcacggcaaatggcctgacggacctgcacgatgacctcagtaattacatagat
ggtcactctcctgaaggtagcaaaggcaactctgcggttagcagcttctacttagacata
caaccttctccagaccaatcgggccttgatattaatggcatcaaaccagaaccagtctgt
gactacactcccacgacgggcttctttccatattgctcctttaccaatggggagacctct
cctactgtgtccatggcagaattagaacaccttgcgcaaaacatctctaagtcacacatg
gaaacctgccagtacttgagggaagagcttcaacagatcacctggcaaacgtttctgcag
gaggaaattgagaactaccagagcaagcaaagagaggtcatgtggcagttatgtgcggtg
aagataacagaagcaatacagtatgtcgtagaatttgccaaacgcattgacggttttatg
gaactatgccaaaacgatcaaattgtgcttttgaaagcagggtctttagaggttgtattt
atcagaatgtgccgtgcctttgactctcagaacaacacagtgtacttcgatggcaaatac
gctggcccagatgtattcaaatcattaggctgtgaagatttcattagtttcgtttttgaa
tttggaaagagtttatgttctatgcaccttactgaagacgagattgcattattctcagct
ttcgttttactatctgcagatcgatcatggcttcaggaaaaggtaaaaattgaaaagctc
cagcaaaaaattcagtttgcgcttcaacatgtcctgcagaaaaaccatcgggaagatgga
atattaacaaagctaatatgcaaagtgtctaccttaagagccctgtgtggacgacataca
gaaaagctcatggcgttcagagcaatatacccagagattgtgcgacttcattttcctccc
ttgtacaaggagttgttcacttcagaatttgagccaacggtgcagatggaagggtaa
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