Pituophis catenifer annectens (San Diego gophersnake): 139323904
Help
Entry
139323904 CDS
T11059
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139323904 (LINGO1)
Membrane trafficking [BR:
pcae04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
139323904 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
139323904
NCBI-ProteinID:
XP_070809558
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MSLEAPELLTSKTMAVKLITQPRDGKATTWQKCGKRKQQDCKRVHQKVKDRMVAGKWSMY
CPILACWQPILILMLGSILSGSATGCPPRCDCSAQERSVTCHRKRYMTVPEGIPTETKLL
DLGKNRIKTLNQDEFVNFPHLEELELNENIISGIEPGAFNNLFNLRTLGLRSNRLKLIPL
GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEHL
TLEKCNLTSIPTEALSHLHGLIVLQLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT
SNCLYGLNLTSLSITHCNLTSIPYVSLRHLVYLRFLNLSYNPIVSIEGSMLHDLLRLQEI
QLVGGQLSVVEPYAFRGLNYLRILNVSGNLLNTLEESAFHSVGNLETLIIDNNPLACDCR
LLWIFRRRWRLNFNKRQPTCATPEFVQGKQFKDFSEALLPNYFICRRSRIRDRKPQQIFV
DEGHTVQFICRADGDPPPVIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYL
CIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKT
LIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSAADAPRKF
NMKMI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgaagcaccagagctgctcacatccaagacaatggctgtaaagctaataacc
cagccaagagatggaaaagcgacaacgtggcagaaatgtgggaagaggaaacaacaagac
tgtaagcgtgtccaccagaaagtaaaagataggatggtggcggggaagtggagcatgtat
tgcccaatcttggcctgttggcagccgattctcatcttgatgttgggatccatcctctca
ggctctgccacgggttgcccaccccgctgtgactgctctgcccaggaacgctcggtgact
tgccaccggaagcgatacatgactgttcctgagggcatccccaccgagaccaaactgttg
gatttggggaaaaaccgcatcaagactctgaaccaggatgagtttgtcaattttcctcac
ttggaggagttggagttaaacgagaatattatcagtggcattgagcccggggctttcaat
aacctcttcaacctcaggactcttggtcttaggagcaatcggctcaaacttatccccctt
ggggtgtttacgggactcagcaacctcaccaagttggacattagtgagaacaaaattgtg
attcttctggattatatgttccaggacttgtacaacctcaagtctttggaggttggggac
aatgatcttgtctatatttcccaccgggcttttagtggcctcaacagcttagaacatctg
accttggagaaatgcaacttgacctccatccctacggaagccctttctcacttgcatggc
ttaattgtgctacagctgcgtcacctgaatattaacgccatcagggattactcctttaag
aggctgtatcgacttaaagtcctggagatttcacattggccctatctagacaccatgaca
tccaactgcctgtatggactcaacctgacatctctgtccatcacccactgcaacctgaca
tcaataccttacgtctccttgaggcacctggtctatctcaggtttctgaacctgtcctac
aaccccattgtcagcatcgaaggctccatgcttcacgacctactcaggcttcaggagata
cagctggttgggggacaactctctgtggtggaaccgtacgccttccggggcctgaactac
ttgcggatcttgaacgtttcagggaatcttctgaatacactggaagaatcagccttccac
tctgtggggaatctggaaacccttatcatagataacaatcctttggcctgtgactgccga
cttctctggatcttccgacgtcgctggaggctgaacttcaataagcggcagcctacctgt
gccacacctgaatttgtccaggggaaacagttcaaggatttttctgaggcgctcctgcca
aactacttcatttgtcgccggtcgcggatacgggaccgcaaaccccagcagatctttgtg
gacgagggccacaccgtgcagttcatctgccgtgcagatggagacccacctccggtcatc
atgtggctgtcgccaaggaagcacctcatctcgaccaaaaccaacgggcggctcaccgtc
ttccccgatggcactctggaggtgcgttacgcccagattcaggacaatggcacctaccta
tgcatcgccagcaacgccggaggcaatgacaccatgctggctcacctgcacgtccgcagt
tattcccccgactggccccaccaacccaataagaccttcgctttcatctccaaccagcca
aacgagagcgatgccaacagcacgcgtgccaccgtgcctttccccttcgacatcaagacc
ctcatcatcgccaccaccatgggcttcatctccttcctgggagtcgtgctcttctgcctg
gtgcttctcttcctttggagcagaggcaaagggaacaccaagcacaatatcgaaatcgag
tacgtcccacggaaatccgatgcgggcatcagttccgctgccgatgcgccgcgcaagttc
aacatgaaaatgatctga
DBGET
integrated database retrieval system
