Pituophis catenifer annectens (San Diego gophersnake): 139323907
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Entry
139323907 CDS
T11059
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
139323907 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139323907 (FAN1)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
139323907 (FAN1)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
139323907 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
TRAF6_Z2
zf-TRAF
EPO_TPO
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
139323907
NCBI-ProteinID:
XP_070809568
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MAEEGPPDKKRPRRKLSLCKSDKKTAGKNGKEALSSIPSSSSIISLFNNAPPARIACPLC
GQTIPRYRINQHMDEECKNNQSEDNVNVIGFASAVTPGPSAETGPVGSSPYFAAKLSTPE
KNSGGDNLETKRGSGGQTSPYFKKVGKLALLDDQPRVGAIKNISLGSLSTRLSRRWRGRS
RDGLIQDGQPSPTQVGITEQKLNQKPWGEDSLKENQLSLSRFGWTTGALNKECDISGLGQ
EDDSRSLSDGLNDSALVSLSCRELGLSRKGHQQVSHPQKNQDVRQLGIPSIVEEEGLTAT
YPREEPSKLESQSFSSNKPDPTLEEDYHHEMQKFSSSTGDATERLSIEDEAGARSEVEDE
VCLATLEKAGFPQSSGNVGPGLDSAGHPYYLRNFLMVLEAVLENEDDRRLFSEEDSEVIA
RFYKLSAPGQKLYVRLFQRKLAWIKTNKIEYAEISSDLSPVIQELVEAGFLQSEAELQNL
SEVLDLLSAPELKTLAKAFHLKNPTSPKQQLLDDFLRLARQRSIFGTCQAGIGSVILKRA
KVLAGKCIKVCRDPRAVFSHVLLLFSLTDPVEEEEAGSGGQRQLSTVLMVNMGRTVFPTY
TVNRKTPIFQDRDDFLRYAAAAHTSNDISVAVTGGNWEEARCLYEAAKASWQELKGHSSL
SHHRALPEYLRRFTVGWLYTRILSQGVEILQRLRMFQEAVEQLQELLAQEDYCVDRRGQW
WERLALNLHQHLKDTEKAVASIRKGLLDPFLRPGHQLGLSQRVQRMKDTPSCQKFKHLLL
ELPLLSVDDVTHVTIKGKLCPQTGMGKSVFILENQTEGPELLTVVCSVEELALAHYKQQG
FDQGIHGEGSTFTALYGLLMWDILFMDGIPDVFRNSYQAFPLDLFTSSFYKNRQSAIEAK
LQSVQDASTETLQTWVGEVWGAQKGKASALIGWDLFSSLQQAQSLVCCLGGPFLSGVCRR
LSQDLRHCRGGLPDLVVWKMEDRQFKLVEVKGPGDRLSHKQTVWLDELQKLGASVEVCHV
EAVGSKSQRLAGVWDPVQ
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggggcctccagataagaaaagacccagaagaaagttgtccctctgtaag
agcgataaaaaaactgcaggaaaaaatggcaaagaggcgctgtcttccatcccaagctct
tcttccattatttccctttttaacaatgctcctcccgccagaattgcctgtcccttgtgt
ggccagacgataccaaggtacagaatcaaccagcatatggacgaagaatgcaaaaataat
cagagcgaggacaacgtgaatgtgattggcttcgcatcggctgtcacccctgggccgtca
gctgaaactgggcctgtgggttcgagtccgtattttgcagctaaactctcaactccagag
aagaattccggaggagacaatctggaaacaaaaagagggtctggaggacagacgagtcca
tatttcaagaaagttggaaaactagctctgcttgatgatcaacctagagttggtgccatt
aaaaatatttccctgggaagcttgtcgaccagattgtccaggaggtggcgtggtcgcagc
agggatgggttgattcaagatggccaaccttctccaactcaagttggcatcacagagcag
aagctcaaccaaaaaccttggggtgaagattccctgaaagagaaccagttgtccctgtca
agattcggatggacaactggagctctaaataaggagtgtgatatctcaggtttgggacaa
gaagatgactcaagatctctctctgatggtctgaatgattctgctctggtatcactcagt
tgcagagaacttggactgtcaagaaaaggtcatcagcaagtaagtcacccccagaagaat
caagatgttcgccaattgggaataccttcaatagttgaggaggaagggttgacagcaact
tatcctagagaagagccatccaagctggaatcccagagtttctcctctaacaagccagat
ccaacactagaagaagactatcaccatgagatgcaaaagttctccagttccacaggagat
gcaacggaacggctttctatagaagatgaggcaggggccagaagtgaagtcgaggatgaa
gtatgtttggcaactttagaaaaagctggttttccacaatcaagtgggaacgttgggcct
ggcctggattcagctgggcacccctattaccttcgaaattttctcatggtcctggaggcc
gtgctggagaacgaagatgatcggagactgttcagtgaggaagattcggaggtcattgct
cggttctacaagctttcagcccctggacagaaactctacgttcggcttttccagcgtaaa
ttggcctggataaagacgaataaaatagaatacgcagagatcagctcggatctttcaccg
gtcatccaagagcttgtcgaagcaggattcctgcagtctgaggccgaactgcaaaacctg
tcagaagtccttgacttactttccgcccccgagttgaaaactttagcaaaagcctttcac
ttgaaaaacccaacttctcccaagcagcagcttctggatgatttcctccggttggcaagg
cagcgctccatctttggcacgtgccaagccgggattggcagtgtcattctaaagagggct
aaagttcttgcggggaaatgcatcaaggtttgtagagatccgcgggctgttttttcccac
gtgctgctactcttctccctgacggatcccgtggaggaggaagaagccggaagtggcggc
caaagacaactttctacggtgctcatggtcaacatgggccggacggtcttccccacttac
acggtcaacaggaaaacgccaatctttcaagatcgggatgatttccttaggtacgctgcc
gctgcacacacctctaatgacatttctgtggcagtgaccggcgggaactgggaagaggca
cgctgcctgtacgaggccgcgaaagcatcttggcaggagctgaaaggacactcttccctc
agccatcaccgagccctcccagaatacctgcggcgtttcactgtgggatggttgtacaca
cggatcctgtcgcagggggtagagatcctgcagaggcttcgcatgtttcaggaggcagtg
gagcagctgcaagaacttctggctcaggaagactattgtgtggacaggcgaggacagtgg
tgggagcgtctagctctgaacttacaccagcacttgaaagacacggagaaggctgttgcg
tccatccggaaaggcctcctggatcccttccttcgcccaggccaccagcttggtctctcc
cagagagtccaaaggatgaaagacaccccatcctgccagaagttcaagcatcttcttctc
gaactgcctcttctttctgtggatgatgttacccatgtcaccatcaaaggaaaactctgc
ccgcagaccgggatgggcaaatccgtgtttatcctggagaatcaaacggagggaccggaa
ctcttgacggtggtctgctccgttgaggaactggccttagctcactacaagcaacagggc
tttgatcaaggcatccatggcgaggggtctacctttaccgccctctacgggctcctgatg
tgggacatccttttcatggatggcatccccgatgtctttaggaactcataccaggctttc
cccctggacctgttcacgagcagtttttacaagaaccgccagtcggccattgaagcaaag
ttgcagtcggtgcaggatgcgtcgacggagaccctccagacgtgggtgggcgaagtgtgg
ggtgcccagaagggcaaagcttcagcgctgatcggctgggacctcttctcatccctccag
caagcccagagcctggtctgctgcttaggaggtcccttcctgagtggagtttgccggcga
ctctcccaggatctgcgccattgcagggggggcctccccgatcttgtcgtctggaagatg
gaagaccggcaatttaagctggtggaagtgaagggtcccggcgaccgcctttcgcacaag
cagacggtgtggttggacgagctgcagaagttgggcgcgtcggtcgaagtttgccacgtg
gaggcagtcgggtctaaaagtcagcgccttgcgggggtctgggatccagtgcaataa
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integrated database retrieval system
