Pituophis catenifer annectens (San Diego gophersnake): 139324039
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Entry
139324039 CDS
T11059
Symbol
MEX3B
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139324039 (MEX3B)
04121 Ubiquitin system [BR:
pcae04121
]
139324039 (MEX3B)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139324039 (MEX3B)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139324039 (MEX3B)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139324039 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
Prok-RING_4
KH_2
KH_KHD4_2nd
KH_DEAH11_2nd
zf-RING_UBOX
KH_PNO1_2nd
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139324039
NCBI-ProteinID:
XP_070809771
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MPSSLFADMERHGSGGGGGGGGETLDDQRALQIALDQLSLLXFDSDETGSLYEPRKKSVN
MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKEDVAMARR
EIISAAEHFSMIRASRNKNTVLNGSVPSPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKR
IQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIELIDENDFHANG
TDVGFELGGGGAGSLWSKPTPSITPTPARKPFCNYRNDSSSSLGSASTDSYFGSNNGRLA
DYSPPSPASLGFPSNGAPSNGYGVYGTPSEGLASPDGCPAELPAFDSPPGFDLAPAPPPQ
LLWSQYERSPGPSLASPAAAAFPGSAPAPAAANLALFVSGGQRRGVPQAPPPTRLSPPLH
SGAGGGSLAATEQHPLARRVRSDPGGRFLAYPLYANGLGCHLPGLPSDCSPSSSSSSSSA
SSSSSSSSCSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKNEPQCPV
CHSAVTQAIRIFS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttcgttgtttgcggacatggagcggcatgggagcggcggcggcggcggagga
ggaggagagaccctggatgaccaaagagctcttcagatcgccttggatcaactctccctc
ctcngctttgacagcgacgagacgggctccctttacgagccgcgcaaaaagagcgtgaac
atgaccgaatgcgtccccgtgccaagctcggaacacgtcgccgagatcgtgggcaggcaa
ggttgcaaaatcaaagcgctgcgggccaaaaccaacacctacatcaagacgccggtgcgg
ggcgaggagccgctcttcgtggtcacgggcaggaaagaagatgtagccatggccaggcgg
gagatcatctcggcggcggaacatttctccatgatccgcgcctcccgcaacaaaaacacc
gttttgaacggctcggtgcccagcccgcctaacctgccgggccaaaccaccatccaagtg
cgggtaccttaccgggtggtcggtttggtagtgggacccaaaggagctactattaagcgc
atccagcagcaaacccacacttacatcgtcacgcccagccgggacaaagagccggttttc
gaagtgaccggcatgccggagaacgtggatcgcgcccgcgaggaaatcgaagctcacatc
gccatgaggactggcggcttgatcgaattgatcgacgagaacgatttccacgccaacggc
accgacgtgggcttcgagctgggcggagggggcgccggcagcctctggagtaagcccacg
cccagcatcaccccgacgccggcccgcaagcctttctgcaactaccgcaacgacagctcc
agctcgctgggcagcgcttccaccgactcctacttcggcagcaacaacggccgcttggcc
gattacagcccgcccagcccggcctctttgggcttcccgtccaacggcgcccccagcaac
ggctacggcgtctacgggaccccttcggaaggcttggcttcgcccgacggctgccccgcc
gagctgccagcttttgattccccgccgggcttcgatctggcgccggctcctcccccgcag
ctgctgtggtcgcagtacgagcgcagccccgggcccagcttggcttcccccgccgccgcc
gcctttcccggctcggctccggctcccgccgccgccaacctggccttgtttgtgagcggc
gggcagaggcggggagttccgcaggctccgcctccgacgcgcctctcccctcccctgcac
tccggggctggaggaggatcgctggcagccaccgagcagcatcctttggcacgtcgggtg
cgcagcgatccgggcggccgcttcttagcttacccgctgtacgccaacgggctgggctgc
cacttgcccggcttgccctccgactgctcgccttcctcctcctcctcctcttcctccgcc
tccagttcttcctccagctcgtcctgctcctcgtccgggctgcgtcggaaaggcagccgc
gactgctcggtttgcttcgagagcgaggtcatcgcggccctcgtgccctgcggccacaac
ctcttctgcatggagtgcgccaaccgcatctgcgagaagaacgagccccagtgccccgtc
tgccacagcgccgtcacccaggccatccgcatcttctcctaa
DBGET
integrated database retrieval system
