Pituophis catenifer annectens (San Diego gophersnake): 139324062
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Entry
139324062 CDS
T11059
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04260
Cardiac muscle contraction
pcae04261
Adrenergic signaling in cardiomyocytes
pcae04814
Motor proteins
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139324062 (TPM1)
04820 Cytoskeleton in muscle cells
139324062 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139324062 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
139324062 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139324062 (TPM1)
04147 Exosome [BR:
pcae04147
]
139324062 (TPM1)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
139324062 (TPM1)
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of microglial cells
139324062 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
CCDC39
Sec2p
Lebercilin
Rod_CreS
Laminin_I
TMF_DNA_bd
FKBP15
CC_Bre1
DUF3450
DUF745
PUMA_CC
HAUS1
ERM_helical
CENP-F_leu_zip
MscS_porin
Exonuc_VII_L
XhlA
AAA_13
DUF16
DUF1664
Fez1
Motif
Other DBs
NCBI-GeneID:
139324062
NCBI-ProteinID:
XP_070809802
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVSLQKKLKSTEDELDKY
SESLKDAQEKLEVAEKKATDAESDVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAA
DESERGMKVIESRALKDEEKMEIQEIQLREAKNIAEDADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLRSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgcgctggac
cgcgccgagcaagccgaggccgacaagaaggccgccgaggagcgcagcaagcagttggaa
gatgagttggtgtctctgcaaaagaagctgaagagcactgaagatgagctggacaaatat
tcagagtccctgaaagatgcccaggagaagctggaggtggcagagaagaaagctacagat
gctgagagcgatgtggcttctctgaacaggcgcatccagctggtggaggaggagctggat
cgtgcccaggagcgcctgacgacagccctgcagaagctggaggaggccgagaaggcggca
gacgagagcgagagaggcatgaaggtcattgagagcagagccctgaaggatgaggagaag
atggagatccaagagatccaactgagagaggccaagaacatcgctgaggacgctgaccgg
aagtacgaggaggtggcccggaagctggtgatcatcgagagtgacctggagcgtgcagaa
gaacgggctgagctctccgaaagcaaatgtgctgaacttgaagaggaattgaaaactgtg
accaacaacctgaggtcgctggaagctcaggcggagaagtactctcagaaggaagacaaa
tacgaagaggaaatcaagatccttactgacaaactgaaagaggctgagacccgagctgaa
tttgcagagaggtcagtaaccaagctagagaagagtatcgacgacttagaagacgagttg
tattcccagaaactcaagtacaaagccatcagcgaggagctggatcacgccctcaacgac
atgacctccatataa
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