Pituophis catenifer annectens (San Diego gophersnake): 139324088
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Entry
139324088 CDS
T11059
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139324088 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139324088 (MYO5A)
04131 Membrane trafficking [BR:
pcae04131
]
139324088 (MYO5A)
03029 Mitochondrial biogenesis [BR:
pcae03029
]
139324088 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139324088 (MYO5A)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139324088 (MYO5A)
mRNA cycle factors
P-body specific factors
139324088 (MYO5A)
Membrane trafficking [BR:
pcae04131
]
Others
Actin-binding proteins
Myosins
139324088 (MYO5A)
Mitochondrial biogenesis [BR:
pcae03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139324088 (MYO5A)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139324088 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
NPHP3_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
139324088
NCBI-ProteinID:
XP_070809845
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEAN
VEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRITGANMRTYLLEKSRVVF
QAEEERNYHIFYQLCASAALPEFKALRLGNAGYFHYTKQGGSPVIDGIDDAKEMLNTRRA
CTLLGIVDSCQMGIFQILAAILHLGNVSFTSRDADSCTIPPKHEPLRIFCDLMGVEYEQM
SHWLCHKKLATATETYIKPISKLQAINARDALAKHIYANLFTWIVDHVNKALQSTVKQHS
FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMREQIPWTLIDFYD
NQPCINLIEAKLGILDLLDEECKMPKGSDNSWAQKLYNTHLNKTALFEKPRLSNKAFIIQ
HFADKVEYQCEGFLEKNKDTVYEEQINVLKSSKFKMLPELFRVEKTISPTSATPSGRTPL
SRAAVKPAKSKMAQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFMF
DEKRTVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLE
KLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYLRMRKA
AITIQKYVRGYQARCLAKFLRRTKAAIIIQKFQRMDAARKRYRHIRAATITLQSHLRGYI
ARKKYHKMLWEHKATIIQKHVRGWLARLRYHRTLKAIIYLQCCFRRLMAKRELKKLKIEA
RSVEHYKKLNVGMENKIMQLQRKIDDQTRDSRSLVEKLTSLEATYTSETEKLRNDIERLR
MSEEEAKNATNRLISLQEEIGKLRKELDQIQTEKKTIKEKADLYKQETDKLVLELKEQNT
LLKKEKDDLNSRIQNQAKEITEVMEKKHLEETKQLDLDLNNERQRYQNLLQEFSRLEERY
DDLKDEMKLMETISKPGHKRTDSTHSSNESEYTYSSEFADAEEFPMGTEEPSEKKAPLDM
SLFLKLQKRVKELEMEKQSLQDELEKKEDQVLRAKAKEEERPQMRGAELEYESLKRQELE
SENKKLKNELNELRKALMEKSAPDVTMPGAPAYRVLLDQMTSVSEELEVRKEEVLILRSQ
LMSQKEAVPFKNTMTDSTILLEDVQKLKDKGEIAQAYIGLKETNRSSPQDCHLLNEDGEL
WLVYEGLKQANRLLETQLQAQKRSHENDLEALRGEIQSLKEENNRQQQLLAQNLQLPPEA
RIEASLQHEITRLTNENLDLLEQMEKQDKTVRKLKKQLKVFAKKIDELEVGQMENISPGQ
IIDEPIHPVNIPRKEKDFQGMLEYKKEDEPKLVKNLILDLKPRGVAVNLIPGLPAYILFM
CVRHADYLNDDQKVRSLLTSTINGIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGEE
GFMKHNTSRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETI
QGVSGVKPTGLRKRTSSIADEGTYTLDSIIRQLNTFHSIMCQHGMDPELIKQVVKQMFYI
IGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTSGAKETLEPLIQAAQLLQ
VKKKTDEDAGAICSMCHALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQLRMRDRKDSP
QLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLGFITRV
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatggacccccacatctttgctgtggctgaggaggcatacaaacagatggcc
agagatgaacggaaccagtccatcattgtaagtggggaatcaggagccgggaaaaccgtg
tctgccaagtatgccatgagatactttgccaccgtgagcgggtctgcaagtgaagctaat
gttgaagagaaagtgttagcttctaatcctataatggagtctattggcaacgctaaaacc
acaagaaacgacaatagcagtcgctttgggaagtacattgaaatcggttttgataagcgg
tatcgaatcacaggggctaacatgagaacttacctcctagaaaaatcgagagtggtattc
caggcggaagaagagagaaattaccatatcttctatcagctttgtgcttctgcggcattg
cctgaatttaaagctttgcggttggggaatgcaggctattttcactatacaaaacaaggg
ggaagcccagtaattgacggaattgatgacgctaaggaaatgcttaacactcgacgggct
tgcactcttttgggcattgttgattcctgtcagatgggaattttccaaatccttgctgct
attcttcacttgggcaatgtgtccttcacatctcgagatgctgacagctgcacaatacct
cctaaacacgaacccctcaggatcttctgcgatctcatgggagtggaatatgaacagatg
tcgcactggctttgccacaaaaagcttgctactgccacagagacctacatcaagccaatt
tccaagctgcaggctatcaatgctagagatgctcttgcgaagcatatctacgcaaacctt
tttacctggattgtagatcatgtgaacaaagctttgcagtccactgtgaaacaacattct
ttcattggcgtattggacatttatgggtttgaaacatttgagatcaacagctttgaacaa
ttctgtataaattacgccaatgagaaattacagcagcagttcaatatgcacgtctttaag
ttggagcaagaagaatacatgagggaacaaattccttggaccttgattgatttctacgac
aatcagccctgcattaatctcatcgaggccaaactgggaattctggatttgctggatgag
gaatgtaagatgcctaaaggttcagacaacagctgggcccagaaattgtacaatacccac
ttaaataagacggcactttttgagaaacctcgattgtccaacaaagcttttataattcaa
cactttgcagataaggtggagtaccagtgcgaaggatttttggaaaaaaacaaagatact
gtctatgaagaacagatcaatgttctcaaatcaagtaagtttaagatgctgcctgagctg
tttcgagtggagaagaccatcagtcccacctcagccacaccatccggtcgtaccccattg
tctcgagcggccgtgaaaccagccaagtcaaaaatggcccaagcaagcaaggaacataag
aaaaccgtggggcatcagttcagaaattctctgcatctcttgatggagaccctcaacgcc
acgactccacattacgttcggtgtatcaaaccaaatgacttcaagtttccatttatgttt
gatgaaaagcggactgtacaacagctgagagcttgcggtgtgctggagacaatccgaatc
agtgcagctggtttcccttcaaggtggacctatcaagaattcttcagccgctatcgtgtc
ctgatgaagcagaaagatgtcctcagtgacaggaaacagacatgcaagaatgtcttggaa
aagctgattctggacaaggataagtaccagtttgggaagacaaaaatatttttccgggct
ggtcaagtagcttatttggaaaaaataagggctgataaactgagagcggcttgcatccgt
atccaaaagactatcagggggtggttgatgcgaaagaagtacctgcgcatgaggaaggca
gccatcaccattcagaaatacgtccgtggataccaggcacgatgccttgcaaagttctta
cgaagaaccaaagctgccatcatcatccagaaattccagcgcatggatgctgcccgaaaa
cggtatcggcacatccgagcagctaccattactctccagtcgcacttgcgaggctacatt
gccaggaagaagtatcacaagatgctttgggagcacaaggccaccattatccaaaaacat
gtgcgcggctggctagctcgcttgcgctaccaccggactttgaaggcaattatttacctg
caatgctgcttccggcgattgatggccaagagggagctgaagaagctgaagatagaagct
cgctcagtagagcactacaagaaactcaacgtcggcatggagaacaagattatgcaactc
cagcgtaaaattgacgaccagacacgagactccaggtccctggttgagaagctaactagc
ttagaggcaacttacacttccgagacggagaagctgcggaatgacatagagaggcttcgg
atgagtgaagaagaggccaagaatgccaccaatcgcctcattagccttcaagaggagatc
ggcaagctgcggaaagagctggatcagatccagacggagaagaaaacgatcaaagaaaag
gcggatctctataaacaggaaacagacaagctggtgcttgaactaaaagagcaaaacaca
cttcttaaaaaggagaaagatgacctgaatagccgcatccaaaaccaggccaaagaaatt
acagaggtcatggagaaaaagcatctcgaggagacaaagcaactggacctagacctgaac
aacgaaaggcagaggtatcagaatctgctccaagaattcagccggttggaagagcgatat
gatgacctcaaggatgagatgaagctgatggagactatttccaaaccggggcacaagaga
acggattccacccatagcagcaatgaatcagaatatacttacagctctgagttcgctgac
gctgaagagtttccaatgggaacagaggaaccgagtgagaaaaaggcaccgttggacatg
tctctcttcctcaaactgcaaaaacgagtgaaggagctggagatggaaaagcagtccctg
caggatgagctagagaagaaggaagaccaagttctgcgggccaaggccaaggaggaagaa
agacctcagatgagaggagcagaactggaatacgaatcgcttaagcgtcaagagcttgag
tcagagaataagaaactaaagaacgaattgaacgagttgaggaaggccctgatggaaaag
agtgctccagatgtcacgatgcctggtgccccagcatacagagtccttttggaccagatg
acctctgtcagtgaagagctggaggtccgcaaggaggaagttctcatcctgaggtctcag
ctgatgagccagaaggaggctgtgccattcaagaataccatgacagactctacaattctt
ctggaagatgttcagaagttgaaggacaaaggagagatcgctcaagcttatattggactg
aaggagacaaacagatcatctcctcaagactgtcatttgctgaacgaggatggcgaactg
tggctggtatatgaagggctaaaacaagccaacaggcttctggaaactcagctgcaggct
cagaagagaagccacgagaatgatctggaggccctccgtggagagatccagagtctgaag
gaggagaataaccgccagcagcagttgctggcccagaacctccagctgcccccagaagct
cggatcgaagccagtctgcagcacgaaatcacccgtctgaccaatgaaaacctggattta
ttggaacagatggagaaacaggacaagacggttcggaaactgaaaaagcagctgaaagtt
ttcgccaaaaaaattgatgagcttgaagtgggccagatggagaacatttcacctgggcaa
atcattgatgagcccatacatcctgtgaatattccaaggaaggaaaaagacttccaagga
atgttggaatacaagaaagaggatgaacccaaactcgttaagaatcttattttagacctg
aagcctcgtggagtggcagtaaatctcatcccagggctgccagcttacattttgttcatg
tgtgtccgccatgctgactaccttaacgatgatcaaaaagtgaggtccttgttgacttct
acgattaacggcatcaaaaaaattttgaagaaaagaggtgacgactttgaaacggtctcc
ttctggctgtcgaacacatgccgatttttgcactgtttgaagcagtatagcggtgaagaa
ggatttatgaaacataacacgtctcgtcagaacgaacattgcctgactaattttgacctt
gccgagtacagacaagtattaagcgacttggccatccaaatttaccagcaactcgttcga
gtgctagagaatattttgcagccaatgattgtttcaggaatgctggagcacgaaaccatc
caaggtgtgtccggggtgaaacccaccggcctgcgcaagagaacctcgagcatcgccgac
gaagggacctacaccttggattccatcatccgtcagctgaacaccttccactccatcatg
tgccagcacggcatggatcctgagctgatcaagcaagtggtcaaacagatgttctacatc
attggggccgtgaccctcaacaaccttctgctgcgaaaggacatgtgctcctggagcaaa
ggaatgcagataaggtacaatgtaagccagctggaagaatggcttcgtgacaagaacctg
atgaccagcggtgcgaaggaaaccctggagcccttgatccaggctgctcagctgctacaa
gtgaaaaagaagaccgatgaggacgcaggggccatctgctccatgtgccacgcattgact
actgcacagattgtgaaagtgttgaacttatatactcccgttaatgagtttgaagaaaga
gtgtctgtgtcttttatccggacaatacagctgcgtatgcgagacaggaaggattctcct
caactcctaatggatgctaagcatatcttcccggtcactttcccgttcaacccttcctct
ctcgcattagaaactatccagatcccagcgagtttgggcctaggattcatcactcgggtc
tga
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integrated database retrieval system
