Pituophis catenifer annectens (San Diego gophersnake): 139324143
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Entry
139324143 CDS
T11059
Symbol
DMXL2
Name
(RefSeq) dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139324143 (DMXL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139324143 (DMXL2)
Membrane trafficking [BR:
pcae04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139324143 (DMXL2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
139324143 (DMXL2)
RAVE complex
139324143 (DMXL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_SPT8
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
139324143
NCBI-ProteinID:
XP_070809918
LinkDB
All DBs
Position
Unknown
AA seq
3054 aa
AA seq
DB search
MGSASEKPPRKPYVRLGQREDLVSAYGSGCDIVILANDFECVQIIPGAKHGNIQVSCVEC
SQEGRIAASYGNTVCIFEPLGINSHKRNCQLKCQWQKTGQFFLTSMTFNLAWDPQGNRLL
TATDNLQLWAPPAKDVLEEEDEEGEDNPDLGVKDEKSHPVLNDWKCIWQCRTAVSVYLME
WSPDGEYFATAGKDDCLLKVWYPMMGWKSSLRPQEGDESRKTSASTQFAFVYLSHPRAVT
GFSWRHTSKFMPRGSVCNVLLTSCQDGVCRLWVETLLPEDTLLGEQICETSTSSISSSTK
FSHSGRHKDNIQHALETIHHLKNLRKGQRRSSVLITHAEDLPNQLGVHEVQRHISHHANA
LCHFHIAASINPNTDIPPALVKTPFNFDEGSEGFVVHWLNNKEFHFTSSTEIFMQHLREL
ADQQMKGAEEDVFERGDRKKERGLLMKLDHELSLDRESETGTGSSDHDDGEKEGSPKILS
PAASPVPLPTILLDRKIELLLKEWNQNPDMLFTIHPVDGTFLVWHVKHLDEYNPGIFRQV
QVSFSSQIPVAFPSGDASSLSKHIMMYACPTFLQESSSGVPAWKRTSISDSLSGCRPSRF
QDQSSGNLSTPTVMMISKHIDGSLNQWAVSFADKSAFTTVHTVTHKFRYCGHRFHLNDLA
CHSVLPLLLTSSHHNALLTPEVDAPWDLEGLNKSADPSRPTLRTPAKQHLQNAATRTFYN
PDAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNS
ASACFVASDGKNLRLYQAVVDARKLLDELSDPGASKLIGEVFNIVSQQSTARPGCIIELD
VITNQCGSNTQLLHVFQEDFILGYKPQKEEVERKETEIFFQPSKGYRPPPFSEKFYLIVI
EKDTNGCSILHMWHLHLKSVQACLGSSADVHSLGQQLTVPGQPMADSSPDTSAGTMPMLR
SSSVANLQTASKLILSSSLVYSYPLDLPPGVEVVRATPSAGHLSSSSIYPVCLAPYLLVT
SCSDNKVRFWRCSLEISENGQGGSKETYSWKKWPLMNDEQEDATSTVCIVGRPVAVSCSY
TGRLAVAYKQPIQPSGVVSKEFSMHVCIFECESTGGSEWVVEQTIHLDDLVKVGSVLDSR
VSVDSNLFVYSKSEIFLNKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRVS
GIVTEQTSSKDGVAVITLPLGGSIKQGIKSRWILLRSIDLVSSVDGTPSLPVSLSWVRDG
ILVVGMDCEMHVYAQWKHVLKSGNAESNGFPLDDSPVTDPLKARLLAKKASIIDGAGMVD
DTFGTPTVIQDGGLFEAAFVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEV
AIVKDSEAADGGSKRHLSRTISVSGSTAKDAVTTGKEGTRDYTEIDSIPPLPLYALLAAD
QDSTYKTEEAPKQTKNLQDRRKRKAEDQYSDLFQVQQVTTDDFIDFEPERREHKSKVINL
SQYGPTYFGQEHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDKHYSG
RDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMLP
AIQRGDPQWSELRTMGIGWWVRNINTLRRCMEKVAKAAFQRNNDALDAALFYLAMKKKAV
VWGLFRSQHDEKMTQFFSHNFSEDRWRKAALKNAFALLGKQRFEQSAAFFLLAGSLKDAI
EVCLEKMEDIQLALIIARLYESEFEISSTYTAILYEKILGCKKDGTGFCCTNLHPDPFLR
SLAYWVMKEYTRALDTLLEQTPKEEDENPVIVKSCNPVVFSFYNYLRTHPLLIRRNFCSP
DGTLATLGLQADKSFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKLPKIRTKSILS
PKKGESTPVTQNGLKVDLIVLDEGSTADWSQPVGTTEASSLVDWSKPLITFEDEPLKLDW
QSNLLDEEEEKGLMMNDLESKEQEVKSPDPSQGEEGEVDKTEVDVIAEQLKFRACLKILM
TELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHETTQGKEDGQTDSQASGDLLGH
QEMGEKMPSGSYEWHQIERRRLQAKREHAERRKWWLQKNQALLRVFLSYCSLHGAQGGGL
ASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIAATKTVIANPVLYLNNHIHD
ILYTIVQMKMPPHPNVEDVKVHTLYSLAASLSASIYQALCDSHSYSSQTETNQFTGMVYQ
GLLLSDRRRLRTESIEEHATPNSLPAQWPGVSSLLNLLNSAQDEDQPKLNILLCEAVVAV
YLSLLIHALATNASNELFRLAAHPLNSRMWAAIFGGGVKLVVKPRRQSENIPAPPVPAEE
TDKHRRRFNMRMLVPGRPVKESVVPPPVPAERPSYKEKFIPPELSMLDYFVAKPFLPFSE
SGVMYDSDESIHSEDEDEDAFLSDMQILEHKDASSYSWALIHLAMVKLALNNIKNFFPIT
GLELSELPVTSPLGTAVIKNLENWEQILQERMDRFEGPPPDYINTGFPEFGMGARAAAAR
IKAMVDPENTPFKSKDYSALPAKRLWHFLVKQELLQDTFIRYTFTKKRKQSESVEDREEH
VTKQSSLAEDGKAKVEAELGYPGGRAKIIHKESDMILAFAVNKANINEIVLASTHDVQEL
DVSALLAAQPYIWIGEEFDRESKSSDDVDFRGSTTTLTQPSAASFAVAQMQHVSNLSTSS
MPWLGSGQTSTGAGILIKRNLNNVKRMTSHPFHQYYLTGAQDGSVRMFEWTRPQQLVCFR
QAGNARVTRMYFNPQGNKCGVADGEGFLSIWQVNQTSSNPKSYLSWQCHSRTTSDFAFIT
SSSLVATSGQSSDNRNVCLWDTLVSSSNNLIHAFTCHEHGATVLQYAPKHQLLISGGRKG
HISIFDIRQRQALHTFQAHDSSIKALALDSSEECFCTGSAEGNVKVWKLTGYGLIHSFKH
EHAKQSIFRNLSTGVMQIEMAPGNRIFSCGADGTLKMRVLPNAFNIPSNLCDIM
NT seq
9165 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggcatctgagaaacctccgaggaagccttacgtgcgtctgggacaaagagag
gatctggtgtctgcttatggctctgggtgcgatattgtcatcttggccaacgacttcgaa
tgcgtgcaaattattcccggtgctaagcatggaaacatccaggtcagctgtgtggaatgt
tcccaggaaggcaggattgctgcctcttatggaaacactgtgtgtatttttgagcccctg
gggataaattctcataagagaaattgtcaactcaagtgtcaatggcagaaaactggacaa
tttttcctcacttccatgaccttcaacttggcatgggaccctcaagggaatcgcttgctc
actgcaacggataatttgcaattgtgggctcctcctgctaaggatgtgttggaagaagaa
gacgaggaaggagaagataatcctgacctcggggtcaaagatgagaaaagccatcctgtt
ctaaatgattggaaatgcatctggcagtgcaggacagcagtttccgtctacttgatggag
tggtcaccggatggcgaatattttgcaacagctgggaaggatgactgcctcttaaaagtc
tggtatcccatgatgggctggaaatcgtctctccgtccccaagaaggagatgaaagcaga
aaaacctctgcctcgacccagttcgcgtttgtctacctttcacatccccgggcagtgacg
ggattttcatggcgacacacaagcaagtttatgcccaggggatctgtttgcaacgtgctc
ctgacttcatgtcaggatggggtttgccggctgtgggtggagacgttgttgcccgaagat
acgcttttgggagagcagatctgcgaaaccagcacttcgagcatcagttccagcaccaaa
ttctcacattcaggaaggcataaggacaacattcagcatgctttggaaacaatccatcat
ctgaaaaatttgaggaagggtcagcgaagatcttcggtgcttatcactcacgcagaagac
ctacccaaccagttgggagtccatgaagtgcagcgccatatctctcaccatgctaacgca
ctctgccatttccacatagctgcaagcattaaccccaacactgatattccgccggcattg
gtgaagaccccgtttaattttgatgaaggcagcgaaggctttgtggttcattggctaaat
aataaggaattccattttacatcttccacggaaatatttatgcagcacttacgagaactg
gcagatcagcagatgaaaggagcggaagaagatgtctttgaaagaggagacagaaagaaa
gagagaggcttactcatgaaacttgatcatgagttgtctctcgacagagaatctgaaaca
gggaccggctcctcagatcacgacgatggagaaaaggagggaagtcccaaaattctttct
ccagctgcctcacccgttccacttcctactatcttgcttgaccggaagattgaacttctg
cttaaagaatggaaccaaaatccagatatgctcttcaccattcatcccgtggacgggacc
tttttggtgtggcacgtgaaacatttggatgagtacaatccagggatctttcgacaagtt
caggtttccttttcctctcagattcccgtggccttcccatcgggcgacgccagttccctc
agtaaacacatcatgatgtacgcctgcccgaccttcttacaggaaagcagcagcggtgtc
ccagcgtggaaaagaactagcatttcagacagcctgtctggatgtagacccagccggttc
caggatcagtccagtggaaacttgtccactcccaccgtcatgatgatctccaaacacatc
gacggctctttaaatcagtgggccgtttcttttgcggacaaatccgcctttaccacggtc
cacaccgtaactcacaagtttcggtactgcggccatcggttccacctcaacgacctggcg
tgccactcggtgctaccgctgctactgacctcatcccaccacaatgctcttctgactccc
gaggttgatgccccgtgggatttggaaggattaaataaatcggcggatccctcgcgtccc
actctgaggaccccagccaagcaacatctgcaaaatgcagcgacccgtacgttctacaat
ccggatgcgatctacagtgagctgatcctttggcgagtggatcccattgggcctttgtcc
tacacaggaggagtatcggaactggcgcgcattaattctctccatacttctgctttctcg
aacgtggcctggctcccaactcttatccctagttattgtctgggaacatattgcaattcg
gccagtgcctgcttcgtggcatccgacgggaagaacttgaggctgtatcaagctgtggtc
gatgctcggaagcttttagatgaactcagcgaccccggagcctccaaactgattggtgaa
gtgtttaacattgtaagccaacagtcaacagctcggccaggatgcattattgagctggat
gtcataaccaaccagtgtgggtccaacacacaattacttcatgtctttcaagaggacttc
attttggggtacaagccgcagaaggaagaggtggagcggaaggaaacggagatatttttc
caaccttctaaaggctatcggcccccacctttctctgaaaagttctatctaattgtaatt
gagaaggacaccaatggctgctcaattcttcacatgtggcatttgcaccttaagtctgtc
caagcatgtttaggctcatctgctgatgttcattcgttgggacagcagttaactgttcct
gggcagccgatggcggattcttctccagacacttcagctggcacaatgcccatgctgcgt
tcttcatcggtggctaaccttcagacggctagtaaacttatactgagttccagcctggtt
tacagttaccccttggatctgccccctggggtggaggttgtgcgagctactccttctgca
ggacacctgagctcctcctccatctatcctgtctgcctggccccttatttgttggtgacg
tcctgttcagacaataaagttcgattctggaggtgttccctagagatttcggaaaacggc
caaggtggatccaaagaaacctattcctggaaaaaatggcctttgatgaatgatgagcaa
gaagatgccaccagcaccgtttgcattgtggggagaccagttgcagttagctgctcgtac
actggccgcttggccgtagcctacaagcaacccattcagccaagcggagtcgtttccaaa
gagttttctatgcacgtgtgtatctttgagtgtgagtctactggaggatcggaatgggtt
gtggaacagaccatccatctggatgacctcgttaaagtcgggagtgtcctggattccagg
gttagcgtagacagcaacttatttgtctacagtaaatctgaaatctttttgaataaggac
cggtaccttatcccaaacatcaagcacctggtccacttagactgggtttccaaggaagac
ggttcgcatatacttacggtcggggtcggtgcaaatatattcatgtatggacgcgtctcg
ggaattgtgacggaacaaaccagcagcaaagatggtgtggcggtcattactttaccgctc
ggcgggagcatcaaacaaggcatcaagtccagatggatacttctgagatccattgatttg
gtgtcttcagtcgatggcaccccgtccttgcctgtttccctttcttgggtgcgagatggt
atcctagtggtgggaatggactgtgaaatgcatgtctacgcccagtggaaacatgtccta
aaatctgggaatgcagaaagcaacggttttcctcttgatgactcccctgttacggaccca
ttgaaggctcgcttgctagccaaaaaagccagcataattgacggagcgggcatggtggat
gatacctttggaacccccaccgtcattcaagacggcggtctcttcgaagcagctttcgtg
ctttcgccaactctgccccagtatcatcccacccagcttctggagctgatggacttgggg
aaagtccgcagagcgaaagctattctgtcccacctcgtaaaatgcatcgcaggcgaagtc
gctatcgtgaaagactcagaagcggccgatgggggctccaagcgccatctctcccgcacg
atcagcgtgagtggcagcacggcaaaggatgcggtcaccactggaaaggaaggcacgcgg
gattacacagagatcgattccatcccgccgctaccgttgtacgccttgctggcagccgac
caagattccacctacaaaacagaggaagcgcctaaacaaaccaaaaacctgcaagatcgt
aggaagaggaaggctgaggatcagtactccgatcttttccaggtccagcaggtcaccacc
gatgacttcatcgattttgagccagagagaagagaacataaatccaaagtgattaacctt
tcccaatacggtccaacatactttggccaagagcatgccagtgtcctgtcaagccattta
atgcactcaagtttgcctggactgactcggctggagcaaatgttcttggtagccctagca
gacactgtggccaccacgagtactgagctggatgaaaaccgagacaagcactactcaggg
agagacactttagatgagtgtggcctgaggtatttgctagccatgcgcttacacacctgc
cttttaacatcccttccacctttgtatcgcgtccagttacttcatcaaggggtttcgacg
tgccacttcgcttgggcgtttcactcggaagcagaggaagagctgatcaacatgcttcct
gccattcaaagaggagacccccagtggtctgagctaagaaccatggggataggctggtgg
gtcaggaatatcaacacgcttcgacggtgcatggaaaaggttgcgaaagccgccttccag
aggaacaacgatgcactggacgctgctcttttttatcttgcaatgaagaagaaggccgtg
gtctggggattatttcgttcccagcacgatgagaaaatgacccaattcttcagccataat
ttcagtgaggacagatggcgcaaagctgccctgaaaaatgccttcgccctcctggggaaa
cagcgcttcgagcaatcagcagcttttttcttattagcggggtcattaaaggatgccatc
gaggtatgtcttgagaagatggaagacatccagctggctttaataattgctcgcttgtat
gagtctgagtttgaaatctcctccacctacacagccatcctttacgaaaagattttgggc
tgtaagaaagatggaaccgggttctgttgcaccaatttgcatccagatcctttcctgaga
agtctggcctactgggttatgaaagagtacacaagagcccttgataccttactggaacaa
acccccaaagaagaagatgaaaatccagttattgtcaaatcctgcaaccccgtggtattc
agtttctacaactacctgcgtacccaccctttgctcatccgaaggaatttctgctcgccc
gatgggacattagcaacgttgggattgcaggcggataaaagttttgtggacaagattaac
ctcattgaacgaaagctcttcttcaccactgcaaatgctcatttcaaagtcggttgccct
gtcctggctctggaagtgctttcaaagcttcccaaaataagaaccaagtccatcctttca
cccaagaaaggagaatccacaccagtaacgcagaatggtttgaaggtagacctaattgta
ttagacgaaggtagcacagcagattggtcacagccggtgggcactacggaagcttcttcc
ctggtggactggagcaaaccattgataacctttgaagatgaacctctgaaacttgactgg
caaagcaatttacttgacgaggaagaggagaaaggtttgatgatgaacgacctggaaagt
aaagaacaagaggtcaaaagtcccgatcccagtcaaggcgaggaaggtgaggtcgacaaa
acggaggtcgatgtgattgcggaacagctcaagttccgggcctgcctaaaaatcctcatg
accgagttgagaacgttggccaccggctacgaagtagatggtgggaagctccggttccag
ttgtacaactggctggagaaagaaatcgccgccttgcatgaaatttgcaaccatgagaca
acccagggcaaagaggatggccaaactgatagccaagccagcggggatctcttgggtcac
caagagatgggggagaagatgccgtcgggctcctacgagtggcatcagatcgagcggaga
cggttgcaagccaagcgagagcacgcggagcggcggaaatggtggctccagaaaaaccag
gcgcttctccgggttttcctaagctattgcagccttcacggggcacagggcggcggcctg
gcttccgtaagaatggagctgaagttcttgttacaggaatctcagcaggaaactactgtg
aaacagctacagtcaccacttccgctgcccacaacgttaccgctgctctccgccagcatc
gctgccactaaaactgtgatcgccaatcccgtcctctacctaaacaaccacatccacgat
atcctttacacgattgtccagatgaaaatgcccccgcatcccaacgtcgaagatgtcaag
gtccatactctttattctttagctgcttccctttctgcatcgatttatcaagccttgtgt
gacagccatagctacagcagtcagacagaaacaaatcagttcacagggatggtttaccaa
gggctgctgctcagcgaccgtcggcgtctgaggacagagagcatcgaagaacacgccaca
ccgaattcgctgcctgctcaatggcctggtgtgagctccttactcaatctcttaaattca
gcccaagatgaggatcagccaaagttaaacatcttgctttgtgaagctgtggtggccgtg
tacctgagtcttctcatccatgctcttgcgacaaacgcttccaatgagttattccggctg
gcagcccatcctctgaacagccgaatgtgggcagcgatttttggaggaggtgtaaaactt
gtggttaaacccaggcggcaatcagaaaatattccagcccctccagtccctgcagaagag
acagataagcatcgcaggagattcaacatgagaatgctagtgcccggaagacccgtcaaa
gagagtgtggtccctcccccggtccctgcagaaaggccttcttacaaagaaaaattcatc
cccccggaactcagcatgttagactattttgtggctaagcccttccttcctttttcagag
agtggggtgatgtacgattctgatgaaagcatccatagtgaggatgaagacgaggatgct
ttcctctctgatatgcagattctggagcacaaggacgccagttcgtacagctgggctctc
atccatttggcaatggtcaagcttgctctgaacaatattaagaactttttccccattacc
ggcttagaactgtctgagcttcccgtcacatcacctctgggtaccgctgtgattaaaaat
ctggagaactgggaacagatcctgcaagaaagaatggatcgctttgaaggtcccccacca
gattacatcaatactggttttcccgaatttgggatgggagccagagcagctgcggcccga
atcaaagcaatggttgatcctgaaaacacaccatttaaatcaaaagattattctgcattg
ccagctaagagattgtggcattttctggtgaaacaagaattattgcaagatactttcatt
cgatacacattcaccaaaaagagaaagcaaagtgagtctgtagaagaccgcgaggagcat
gtcacaaaacagagcagcctagcagaagatggcaaagccaaggtggaggcagaactcggc
tacccaggagggagagccaaaattatccacaaggaatcggatatgatcctcgcctttgcg
gtgaataaggcaaacatcaatgagatcgttttagcttccacccacgacgtgcaagagctg
gacgtatccgccctcttggctgcacagccctacatatggatcggagaagagtttgacagg
gaatcgaaaagttcagacgatgtggacttccgtggctccaccaccacgctgacacagccc
agcgctgcatcttttgcagtggctcaaatgcagcacgtttcaaatctgtccacttcatcg
atgccatggttgggcagcgggcaaaccagtactggagctggtatactcatcaaaaggaat
ttgaacaacgtcaaaagaatgacatctcacccattccatcaatattatctgactggagcc
caggatggcagcgtccgaatgtttgaatggaccagacctcagcagctggtatgcttccgt
caagcaggcaacgccagggttacgagaatgtatttcaatcctcagggcaataagtgtggg
gtggctgacggagaaggattcttaagcatttggcaagtgaaccaaacttcgagtaatcct
aaatcctatctgagctggcagtgccacagtagaaccacaagtgactttgccttcattacc
tcttcgagtctagtggccacatctggacagtccagcgacaaccgaaatgtgtgcttgtgg
gacaccttggtgtcatcatccaacaatctcatacatgccttcacatgtcatgaacatggc
gccacagtgcttcagtatgcaccgaaacatcagctgctgatttccggaggcaggaaaggc
catatatccatctttgacatccggcaaaggcaggcccttcacacatttcaggcacatgat
tcctcaatcaaggcccttgccttggactcctcagaagaatgtttctgcacaggttctgca
gaaggcaacgtaaaggtctggaaactaactggctacggtttgatccattccttcaaacac
gaacacgctaagcaatccatcttccgcaacctgagtacaggagtcatgcagattgaaatg
gccccgggcaaccgcattttctcctgcggggcagacggcactctgaaaatgagggtttta
cccaacgctttcaatatcccctcaaacctctgtgacattatgtag
DBGET
integrated database retrieval system
