Pituophis catenifer annectens (San Diego gophersnake): 139324147
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Entry
139324147 CDS
T11059
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139324147 (HCN4)
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
139324147 (HCN4)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
139324147
NCBI-ProteinID:
XP_070809923
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All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MDRLPPSMRKRLYSLPQQIAPKASLMAEEEEEEESGGGGEGGGGGGGGGGGGCKDARRKS
IRLHPLSPSAAAGASAEPSRPGSGSRASEGGPAESAEASAGGLGRPSAKSSTNGDCRRLK
GSRSSLASRHPHDSGEGRRLIGHEGEAASPGDERSPPGLADAPTAAAAPSSSSSSTPAAA
APRQDAPPDAAFVKVESPGASGDQISPDDELRLGQAGFMQRQFGALLQPGVNKFSLRMFG
SQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPW
IVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYI
FLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAV
VRIVNLIGMMLLLCHWDGCLQFLVPMLQEFPGDCWVSLNRMVNDSWGKQYSYALFKAMSH
MLCIGYGQQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVE
QYMSFHKLPAEMRQRIHDYYEHRYQGKMFDEESILGELSEPLKEEIINFNCRKLVASMPL
FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGLVSVLTKGNKETKLADG
SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIG
KKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHNIQAATAAAASTPTPVIW
TPLIQAPLQAAAATTSVAIALTHHPRLPTAIFRPPVSVLGSLGQTQSQTPRRLRRLHSLV
SSAGPSIVGSPSSTPSQQHTPGMETLSSSSFQIQQLAGFTASATLGPLHRSLASSPSVGS
TQQNLGSPTSTGLEQLCPGPLDLTEGAARQQASDTSFGPFQKAPPRSPPATAPTSFPQLS
SNSPISPCSRLQPTGRPHSTGQLLQLSGTGGTNHFQLPPSSSSPSSGLRQLSQASGGPPP
ASGPTQPSALGSSAEPATVAQLHQERSSFASLSPPKPGPVPPPLYPLPSGLSPPSQSLPP
RTFQRSPSGTLGSQGSLLLPQTSSPPPQVLPPRSRPLVLSGRLTQDLKLISASQPTLPHE
AAQTSSPHSSSRESVSSFSSFSGGGGGGNVSDIGGGPRPLGKPYSSGPGRVTLPRQTSSG
SLPQPPAFAISSSMPSAERKGSLKLSGEQEPTRSKLPSNL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttgccgccgtcgatgcgcaagcggctctacagcctcccgcagcagatcgcg
cccaaagcctcgctgatggccgaggaagaggaggaggaggagagcggcgggggaggtgaa
ggtggaggaggaggaggaggaggaggaggcggtggctgcaaagatgcccggcgcaagagc
atccgcctgcacccgctctcgccctcggcggccgcaggagcttcggcggagccgtcgagg
cccggctcgggatccagagcctcggaaggcggccctgcggagagcgcagaggcgtcggcc
ggtgggcttggccggccgagcgccaagagcagcaccaacggcgactgtcggcgtctgaag
ggcagccgctcgtctctggccagccgccacccgcacgactcgggcgagggtcgccgcctg
atcggccacgaaggcgaagccgcttccccgggcgacgagcggagccccccgggcctggcg
gacgcccccactgccgccgccgccccttcctcctcctcttcctccaccccggcggcggcc
gctccccgccaggacgcgccgcccgacgcggccttcgtgaaggtggaaagccccggggct
tcgggggaccagatcagccccgacgacgagcttcggctgggccaagccggcttcatgcag
cgccagttcggcgctctgctgcagcccggcgtgaacaaattctccctgcggatgttcggc
agccagaaggcggtggagagggaacaagagagggtcaaatcggccggcttctggatcatc
catccttacagcgacttcaggttctactgggacctcaccatgttgctcctcatggttgga
aacctgatcatcattccagtaggcatcaccttcttcaaggatgagaacaccaccccgtgg
atcgtcttcaacgtggtctcggataccttcttcctcattgacctggtgctcaatttccgc
acggggattgtggtggaagacaacacggagatcatccttgacccccagaggattaagatg
aagtacctcaaaagctggtttgtggtggattttatctcgtccattccggtagactacatt
ttcctgattgtggagacccgcatcgattcggaggtatataagacggcccgagctctgcgg
atcgtccgtttcaccaaaatcctcagcctcttgaggctcctgagactgtctaggctcata
cggtacattcatcagtgggaagagatcttccatatgacctacgacctggccagtgccgtg
gtacggatcgtcaacttgattggcatgatgctgttgttgtgccattgggatggctgcctc
cagttcctggtgcccatgctccaagaatttccaggggactgttgggtttcgctgaatcgt
atggtgaatgactcctgggggaagcaatactcgtatgcgctattcaaggctatgagtcac
atgctatgtatcggctacggacagcaggccccagtgggcatgtctgacgtgtggctcaca
atgttaagcatgatcgttggcgccacgtgctatgccatgttcatcggccacgccacagcc
cttatccagtctctggattcctcacggcgacagtatcaggagaagtacaagcaagtcgaa
caatacatgtctttccacaaacttccagctgagatgcgccaaaggatccatgactactat
gaacatcggtaccagggcaaaatgtttgatgaggagagcatcctgggagaactaagtgag
cccctgaaagaggagatcatcaactttaactgcaggaaactggtggcttccatgcctcta
ttcgccaacgccgaccccaatttcgtaacctccatgctgaccaagttgcgctttgaggtc
ttccagccaggggactacatcatccgagaaggcaccatcgggaagaagatgtacttcatc
caacatgggttggtgagtgtgctcaccaaaggcaacaaggagaccaaactggccgatggt
tcctactttggagaaatttgcctgttgactcgtggtcggcgcacagccagcgtgagagct
gacacgtactgccgtctctactcgctttcggtggacaatttcaacgaagtattagaggaa
tatcccatgatgaggagggccttcgaaacagtggcactggataggttggaccgcattggg
aagaagaactccatccttctccataaggtccaacatgacctcaactcgggtgtcttcaac
taccaggagaacgagatcatccaacaaattgtgcagcatgaccgagaaatggcccactgt
gcccacaacatccaagcggcaacggcggcggcagcatcgactcccacgcctgtaatttgg
accccgctgatccaggctccactgcaggctgccgccgccaccacttcggtagcaatagcg
ctgactcaccacccacgccttcccacagccattttccgtcctccggtctccgttctgggt
tctctggggcagacgcaaagccagactccgaggcgcttgaggaggctccattccttggtg
tcttctgccggaccttccattgtgggttccccgtcaagcacgccatcccaacagcacacg
ccagggatggagaccctttcctcctcctcctttcagatccagcagttggctgggtttact
gcatcagccaccctgggtccgttgcaccggtccttggccagctctccatccgttgggtcg
acgcagcaaaacctgggcagcccaacatctaccggactggagcagctgtgtcctgggccg
ctggatttgacagaaggggccgctcggcagcaggcttcagacaccagctttggcccattc
cagaaggctcctccaaggtcgccccccgccaccgcccccacctcattccctcaactctct
tcaaattcccccattagtccttgcagccgcttgcaacctacgggcaggccccactccacg
gggcagctgttgcagctctcaggaactggagggaccaaccacttccagttgcccccttca
tccagttctccctcctctggcttacgccagctgtcccaggcctcgggaggcccccctcct
gcctccggccccacccagccaagtgcattaggctcttctgccgagccggccactgttgct
cagttgcaccaggaacgatcctccttcgcttccctgtctcccccaaagcccggtcctgta
cccccacccttgtaccccctaccatcaggccttagccctcccagtcaaagcctgcccccc
aggactttccagcgcagcccgtcagggacgctgggttctcaaggctctttgctcctgcct
cagacctccagcccacctccccaggtgctcccaccccggagtcggccactggttttgtca
ggacgattaacccaggacctcaagttgatctccgcctcccaaccgactcttccccacgaa
gcagcgcagacttcgagcccgcattcctcctcccgggagtctgtttctagcttctcttcg
ttctccggaggaggaggaggaggcaacgtcagtgacatcgggggaggccccagacctctg
gggaagccatatagttcggggccaggacgggtcacgctaccacgccagacatcttcaggt
tctctgccccaacctccagcatttgccatctcctcctctatgccctctgccgaaaggaaa
ggatctctaaagctgagcggggaacaagagcccacccgctcaaaactgccttccaacttg
tga
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