Pituophis catenifer annectens (San Diego gophersnake): 139324161
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Entry
139324161 CDS
T11059
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
139324161
NCBI-ProteinID:
XP_070809957
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MKFRLLTASALLLAISRCWAVSFPEDDDPINVVDYHYSKQYPVFRGRPSGNESQHKLDFQ
LMLKIRDTLYIAGRDQVYTVNLNDIPKGEVVPSKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGDEISGLARCPFDAKQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEISGIPTVVGVFTTQLNSIPGSAVCAFNMEDIEKAFKGRFKEQKTPDSVWTAVPED
KVPRPRPGCCAKHGPAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVIEEPWFTKTRVRYR
LTAIAVDHSAGPYQNYTVIFVGSEAGMVLKILAKTKAFSLNDSILLEEIDAFNHAKCNGD
GEEDKKVVSLQLDKEHHVLFIAFSSCIIRIPLSRCERHGSCKKTCIASRDPYCGWLAHGS
CGRVRASMLLSLFVSYNHSIGGYEQDVEYGNTAHLGDCHEILPTTTTPDYKIFGDPTSDM
LLSSASITTVGSIPVISPKVIGSWKPKVTGSRKFVAQDDPNTSDYSEPLSGDPKGVRWEV
QSGDSNQMVHMNVLITCVFAAFLLGAFIAGVAVYCYRDVFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPQTADTKSMLMVDHRAQPPELA
ALPTPESTPVLQQKTLQGMKSQMEKAQNNLSSSRKEAPLKSPQFFPSSPPPHSPLSHGHI
PSAIVLPNATHDYNMSFSNSNAHKADKKMPNVDHPLTKSSGKRDHRRSVDSRNTLNDFLK
HLNEAPSNSKAIMADLQVTHQTLMLDSMGNVTEVPPKVPNREASLYSPPSTLPRNSPTKR
VDVPNAPAAPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGMLLSRQPSVNRGGYMTPT
GGSKMDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGIKRMPSLKPDVPPKPSFAPQTPS
VRPLNKYSY
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgtctcctcacggcctctgcactgctccttgcgatctcccgatgctgggct
gtcagctttccagaagatgatgatcctattaacgtggtcgactaccattattccaagcaa
tatccagtgtttagaggacgcccttcaggcaacgaatcccaacacaagctggactttcaa
ctgatgttgaaaattcgagacacactttatatagctggcagggaccaagtttatacagta
aatttgaatgacattccaaaaggggaagttgttccaagcaagaagttaacatggcggtca
aagcaacaggaccgggagaattgtgctatgaaaggaaaacacaaagatgaatgccataat
tttattaaagtcttcgtccccaggaacgatgagatggttttcgtctgtggaacaaatgct
tttaatcctatgtgccgttattatcggctgagtaccttggagtatgacggagacgaaatt
agtggtttagccagatgcccatttgatgccaagcaaaccaacgttgccctctttgctgat
ggcaaactctattctgccaccgttgcggatttcttggcaagcgacgccgttatttaccgg
agcatgggagatgggtcggccttgcgaacaataaaatatgattccaagtggataaaagag
ccccatttccttcacgccatcgaatatgggaactatgtttatttcttcttccgagagatt
gctgtggaacataacaatttaggcaaggctgtgtattcccgcgtggctcgcatctgcaaa
aacgacatgggaggctcccagagagtgctggaaaaacactggacgtcattcctgaaagca
cgtctcaactgctcagtgcctggggattcatttttctactttgatgtgctgcagtctatc
accgacatcattgaaatcagtggcatccctaccgtggtcggtgttttcaccacacagctg
aacagcatccctggctcagccgtttgcgctttcaatatggaagacattgaaaaagccttc
aaagggagatttaaagagcagaaaacccccgactctgtttggacagctgtacccgaagac
aaagtaccgaggccgagacctggttgctgtgcaaaacatggcccggcagaggcttacaaa
acctccattgatttcccagatgaaacgctttctttcatcaagtcccatcctttgatggat
tccgctgttccgtctgtcattgaggagccgtggttcacaaagacgcgagtcaggtatcgg
ttgaccgcaatagctgtggatcattcagctggcccgtatcaaaactacacagtcatcttt
gtgggctctgaagctggaatggtacttaagatcctggcgaagaccaaagctttttcactg
aacgacagcatcttactggaagagattgatgctttcaatcatgccaaatgtaatggggat
ggtgaagaggacaaaaaagttgtctctctgcaattggacaaagagcaccatgtgttgttc
attgcgttctccagctgcatcattagaattcccctcagccgttgtgagcgtcatggatca
tgtaaaaagacttgcattgcttctcgggacccttactgtggctggttggcccacggatcc
tgcgggagagtgagagcaagcatgttgttatctttgtttgtttcatacaaccacagcatt
ggagggtatgagcaagacgtggagtacggcaacactgcccacctgggggattgccacgaa
attttgcctactacaactacaccagattacaaaatatttggcgatccaacatctgacatg
ctgttatcctcagcttccattaccacagtgggaagcatccctgttatctcacccaaagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagctcaagatgaccca
aacacttctgattactctgaacctttatcaggggatccaaagggtgtgaggtgggaagtc
cagtcgggcgattccaaccaaatggtgcacatgaatgtcctgattacctgtgtctttgcg
gctttccttctgggagcgtttattgccggcgtggctgtttactgttaccgagacgttttt
gtgagaaaatccaggaagattcacaaagacgcagagtcggctcaatcctgcacagattcc
agcgggagttttgccaagctgaatggcctctttgatagcccagtgaaggagtatcagcag
aacattgattcgcccaaactttactccaacttgctgacgagtcgcaaagagctgccccag
acggcggacacgaagtccatgttgatggtggaccacagagcccaaccaccagaactggca
gctcttccgaccccggaatcgactcctgtgcttcagcaaaagaccttacaagggatgaag
agccagatggagaaggcccagaacaacctcagctcttcaaggaaagaagcccccttgaag
agtcctcagtttttcccctccagtcctccaccccattctcctttaagccacggacacatc
cccagcgctattgtccttcccaatgccacccacgattacaacatgtccttctccaattct
aacgcgcacaaagcggacaaaaagatgcccaatgtggaccacccactgactaagtcctcg
ggcaaaagagatcacaggcgatctgtggattccagaaataccttgaatgacttcctgaaa
catttaaacgaagcccccagcaactccaaagccatcatggctgaccttcaggtgactcac
cagactttaatgttggattccatgggcaacgtcacggaggtcccccccaaagtccctaac
cgggaagcatctttgtactctcctccttccaccctgccacgaaatagcccgacgaaacgg
gtcgacgtccccaatgcgccggcagcaccaatgacctctttggaaaggcaaaggggctac
cacaagaattcttcccagaggcattctatatcagctcttcctaaaaacttaaactcccct
aacgggatgctgctctccaggcagcctagcgttaaccggggaggatatatgactccgacc
ggaggctcaaagatggactacatccaagggacaccggtcagcgtccacctacagccttcc
ttgtctaggcaaagcagttacacgagcaacgggacgcttcctcggacagggataaagagg
atgccctctcttaagccagatgtgccacccaaaccttcttttgccccacagacgccttca
gtcagaccactgaacaaatacagttattaa
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