Pituophis catenifer annectens (San Diego gophersnake): 139324728
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Entry
139324728 CDS
T11059
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139324728 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139324728 (CHD8)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139324728 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
139324728
NCBI-ProteinID:
XP_070810572
LinkDB
All DBs
Position
Unknown
AA seq
2464 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDLTDESFNQGAPDPIEEALGLSGATLDSLAGGSKDQQVTPQPE
PSQPETLPLPDTRPESVTEPTQPDQPGLLQVPQDQEVLSQGNPFMGVSSATTASTVVPSS
SASGQQTTVPPPAPKIVILKAPAGSSMTGAHVAQIQAQPIGAANGGKVTFAKVLTGTPLR
PGVSIVSGNAVLATKVSPGAGAPATLHRLVQPGRPVKQLVLQPVKSQAGGNTGATPLKPA
VTLTSTPAQVSTQFFQGESKRITLVLQQPPTAGNAPGQRQVVLGSLPGKIVLQGNQLAAL
SQAKGVPGQPAKVVTIQLQVQQPGQQQQSSGQPGTQKIQLLQPTTAGASGQQTPLSVPAV
QQAQVVGGSGQRVTVPVKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTRSSSD
ESRKLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRKGG
GERIPKEDRPRKGRGQAGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPRE
EEEASIQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPIKTEQPPAPEPPAPEPIP
EGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPNGQFTEAEEFFVKYKNYSYLHCE
WATIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNG
EPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELKRVARPQAGSWKKLEL
SHEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLEEVYNVGIRGP
FLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFD
ALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKQETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLI
NGAEEKILTEFRDSCHHHVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVR
CLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKA
VLQSMSGREGSITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTT
ITIESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLDLLNSKNNLVIDTPR
IRKQTRHFSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHPLHHSYGRTDCFQVEKQLLV
YGWGRWREILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVENGK
AKELQNHSGLSIPVPRGRKGKKVKSQTTFDLQKAEWIHKYNPDTLFQDEGYKKHLKHQCN
KVLLRVRMLYYLRQEVIGDQAEKVLAGAVSSETDIWFPLVDQAEVPTAWWDTEADKSLLL
GVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRPDVGEGVDFDKDCEDPEYKPVG
APAKEHDEEGEALMMMDEDISVVDGEEGQPGNLFWPPASALTARLRRLITAFQRSYKREQ
LKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVVSTFGVEYDPDTMRF
HWSRFRTLARLDKKTDESLAKYFHGFVAMCRQVCRLPPAASDESPDPTLFIEPITEERAS
RTLYRIDLLRRLREQVLCHPLLEERLALCQSPGPEMPPWWQCGRHDGELLRGVARHGLSQ
TDTTIMQDPDFSFLAARLSHLHSRAGGTGTPPLPPPGPAQPTGLPLPGVSTAAAPSPLLL
APPLNEPPAPPQPLALPPKPESAEDSDSELDLSKISASSSCSSSSGCSDDSEGEEASCGG
KLFEEEESSLLSLPTSHEGNSPQPSASDLLLQERQRAHEWPKDRVLITRIDLVCQAVLSG
KWPSPQQGQVVSCVGQGEGLPHLHGEYTTSPIPHICPLASQEEGTASFTRLRHGGQEKEF
TVQIKDEEGIKLTFQKHKLVPNGTVRDRPALTQKKSSKKMVELELQCLEALRGPDIDLEA
HIPVVNKTDGTLLVGDAAPRRADLEVWLQAHPEYAVDPRFLAYMEERRKHRWPRFPKPVP
IEPNCLVGLERMQVAGISANGKKGFLPDPTMNRLLPGAVGADNAQKRSRQTPMEFSNMMA
LMGAGRVQLGATGPLSLHHHAHFQTTPAHGSALQYMPFPAAAAATAATTSGTLLHPGLGH
AGYAAAPLHLGHPQRVDEDEEEDEMDDLSQGYASSERDFSLLDDDPMMPANSDSSDEGEE
EGED
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccatcatggacctctttgacgatcctaacctctttggcttggacttgacc
gatgagagctttaaccagggcgctccagaccccattgaagaggccttgggactttcaggg
gccaccttagactccttagcggggggctccaaagaccagcaggtaaccccccagccggag
ccctcccaaccagagaccctgccccttcccgatacgcgaccggagtccgtgaccgagccg
acccagccagatcaaccgggtctcctacaggtccctcaggatcaagaggttctcagccaa
ggcaacccgttcatgggcgtctcgtcggccacgaccgcctcaacggtcgtgccctcttct
tctgccagcgggcagcaaaccaccgtgcccccgccggcccccaagatcgtcatcctgaaa
gccccagccggaagctccatgaccggcgctcatgtggcccagatccaagctcagcccatt
ggggcagccaacgggggcaaagtgaccttcgccaaggtcctgacgggaacccctttgcgt
cccggggtctccatcgtctcaggcaatgcagtgctggccaccaaagtgtctcctggagcc
ggggcgcccgcgacactccaccggttggtgcaacccggacgtcccgtcaagcagctagtc
ctgcagcccgtaaagagccaagcgggagggaacacgggagctactccgctcaaacctgcc
gtgactctaacgtcgactccagctcaggtgagcacacagttcttccagggggagtccaaa
cgcatcaccttggttctccagcaacccccgactgctggaaatgctccgggacagcggcaa
gttgttttgggcagtttgcctggcaagattgtccttcaagggaatcagctggctgcccta
agccaggccaaaggagtgccagggcaacctgccaaggtggtgaccatccagctccaggtt
cagcagccgggacagcaacagcaatccagcggccagccggggacgcagaagatccagctc
ttgcagccgaccacggccggcgcctccggccagcagaccccgttaagcgtacccgccgtc
caacaagcccaagtggttgggggctcaggtcaaagggtgacggtccccgtcaaagtcgtc
ctgcagccacaggccagctcgtcccaaggcagctcctcaggactctcagtagtgaaggtg
ctgagcagcagcgaggtggcggccctcccgtcctccagcggcacacggagcagctcggat
gaatcccgtaagctggagcaccagaagaagcaggagaaggccaaccggatcgtagcagag
gccatcgctcgggcccgagcccggggcgagcagaacatcccgcgggtgctgaacgaggac
gagctgcccagcgttcggccagaagagacgggagaacgcaagcggcgccggaagggcggg
ggcgagcgcatccccaaagaggaccgaccacgcaagggcaggggccaggcgggatccggc
aagagcaaaggccgtgggaaacccagcacgatcacaccagttgttgggaagaaacggaaa
aggaacgcttcttcggacaattcagatgccgaggtgatgccagcccagtctccgcgtgag
gaggaagaggccagcatccagaaacggcgttcgaaccgtcaggtgaagcgaaagaaatat
acagaagatctggacattaagatcacggatgatgaagacgacgaggagctggatgtgacc
gggcccattaagaccgaacagcccccagctccagaaccgcctgctccagaacccatccct
gaaggagagacattgccatcaatgcagttctttgtggaaaacccgagtgaagaggatgct
gccatcgtagacaaggtcctgtccatgcgagtggtgaagaaggagctacccaacgggcag
ttcacagaagcagaagaattctttgtgaaatacaaaaactactcttacttacactgcgaa
tgggccaccattgctcaactggagaaggacaagaggatccaccagaagctcaaacgcttt
aagaccaaaatggctcagatgaggcacttcttccatgaggacgaggagcctttcaaccca
gactacgtggaagttgaccgcatcctggatgaatcgcacagcattgacaaggataatggc
gagccggtgatctattacttggtaaagtggtgttcgctcccttacgaagacagcacgtgg
gagctgaaagaagacgtggacgaagggaaggtccgagagtttaaacgcatccagtccagg
caccctgagctcaaacgggtggctcgaccccaggcaggttcctggaaaaagctggaactt
tcgcacgaatacaagaacggcaatcagttgcgcgaatatcagctggagggcgtcaactgg
ttgcttttcaactggtacaataggcaaaattgcattctggctgacgaaatggggttgggt
aaaaccatccaatccatcgccttcttggaggaagtttataacgtcgggatccggggaccc
ttcctggtcatcgcccctctgtccaccatcaccaattgggagcgggaattcaacacctgg
accgagatgaacaccattgtgtaccacggcagcttggcatcccgccagatgattcaacaa
tacgagatgtactgtaaggattcccggggtcgcctgatcccaggcgcgtacaagtttgat
gccctgatcaccacctttgagatgatcctgtcggactgccccgagctgagggagatcgag
tggcgttgtgtgatcatcgatgaagctcaccgcctgaagaaccgcaactgcaaactgctg
gacagcctcaagcatatggacttggaacacaaagtgttactaacgggcacccctctccag
aacactgtggaagaactcttcagcctcctgcacttccttgaaccttcccaattcccctca
gaatcggagttcctcaaggactttggggatctcaaaactgaggagcaggtacagaaactg
caggcaatcctgaagcccatgatgctccggcggctgaaggaggatgtggagaagaatttg
gcccccaagcaggaaactatcattgaggtggagctgaccaacatccagaagaagtactac
cgggccatcctagagaagaacttcaacttcctctccaagggggcggggcacagcaacatg
cccaaccttctcaacaccatgatggagctacgcaagtgttgcaaccacccctacctcatc
aatggtgccgaggagaagatcttgaccgagtttcgggattcctgtcaccaccacgtgccc
cacgattttcccctgcaggccatggtgcgttcctctgggaaattggtgctgatcgataaa
ctgcttccgaaattgaaagccggaggacacaaggtgctgattttttcccagatggtccgt
tgcctcgacatcctggaagactacctcatccaaaagaggtatctctacgagcgcattgat
gggcgggtgcgtggcaatctgcggcaggccgccatcgaccgctttagcaagcctgattcg
gatcgcttcgtgttccttctctgcacccgggcgggaggtctagggatcaacctcacagct
gctgatacctgcataattttcgactcggactggaatcctcaaaacgacttgcaggcgcaa
gctcgctgccaccgcatcggacagagcaaggctgtgaaagtttaccgcctcatcactcgg
aattcctacgagcgggagatgtttgacaaagccagcctcaagctagggctggacaaggct
gttctgcagtctatgagcggacgagaagggagcatcactgggattcagcagttttcgaag
aaagagatcgaggatttgctacgcaaaggggcctatgccgccattatggaagaggatgac
gaagggtctaaattctgtgaagaagacattgaccagatccttcttcggcgtaccaccacc
atcaccatcgagagtgaagggaaagggtccacttttgccaaggcgagttttgtggcctct
gaaaacaggacagacatcgctctggatgaccccaacttctggcagaaatgggccaagaaa
gcagacttagacctggatctcctgaatagtaagaacaacctggtgattgacacgccccgg
atccgcaagcagactcgccacttcagtaccctgaaggacgacgacctggttgagttctcc
gacttggaaagcgacgatgacgaccggccgcgctcccggcgccacgaccggcaccaccat
cccctccaccattcgtacgggcgcaccgactgcttccaggtggagaaacaactgctggtc
tatggctggggccgctggagggagatcctgtcgcacggacgtttcaagcggcggatgtcc
gagcgtgacgtggagaccatctgccgcgccatcctggtctactgcttgatgcattatcgg
ggcgacgagaacatcaaaggattcatctgggatctcatcagcccggttgagaacggcaaa
gccaaggagcttcagaaccactcgggcctgtccatcccggttccacggggccgcaagggg
aagaaagtcaagtctcagaccacgttcgatctccagaaagcagagtggatccacaagtac
aatccggacactctcttccaagacgaaggctacaaaaaacatctcaagcatcagtgtaac
aaggtgctgctcagggtccgaatgctttattacttgcgtcaggaggtgatcggggaccag
gccgagaaagtgttggcaggtgctgtttccagcgaaactgacatctggtttccgctcgtg
gatcaggcagaagtccccacagcctggtgggacacggaagcggacaaatctttgctcctt
ggggtcttcaaacatggctacgagaagtacaacaccatgcgagccgaccctgcgctctgt
ttcctggagaaagccggccgcccggatgacaaggccattgccgctgagcaccgaccggat
gtgggcgagggggtggattttgacaaggactgcgaggatccggaatacaaaccggtcgga
gcccctgccaaggaacacgatgaagagggcgaagcactaatgatgatggatgaagacata
tcggtggtggacggggaggaaggtcagccagggaatcttttctggcctccagcctctgcg
cttaccgcccgtttgcggcgactaatcacggccttccagcggagctacaagcgcgagcaa
ctgaagatggaggccgcggagcggggggatcggcgtcgccggcgttgcgaggccgccttc
aagctgaaggagatggtgcgtcgagagaagcagcagaggtggacacgtcgtgagcagtcg
gacttctatcgcgtggtttccacgttcggagtggaatatgatccagacacgatgcggttc
cactggagtcggtttcggacccttgcccgcttagacaagaagaccgatgaaagcctagcc
aaatattttcacggttttgtggccatgtgtcgacaggtgtgccgccttcctcccgctgca
agtgatgagtctccagaccccaccctgtttatcgaacccatcacggaagagcgggcctcc
cgcaccctgtaccgcattgatctcctgcgccgtctgcgggagcaagtgctgtgccatccc
ctcttggaggagcgccttgccctgtgccagtctcctgggcccgagatgccaccgtggtgg
cagtgcgggcgccatgacggagagctgctgcggggagtggcccgccatggtctgagccaa
accgacaccaccatcatgcaggacccagacttttctttcctggcggctcggctcagccac
ctgcacagtcgggcagggggcacagggacaccccctcttccgcccccggggccagctcag
cctacaggtctaccccttccgggggtcagcacggcggctgctccgtcccccctgctcctc
gctccacctttgaatgagccacctgctccaccgcagccgctcgccttgcctcccaaaccc
gaatcggccgaggactccgactccgaacttgacctcagcaagatttctgcttcatcgtcg
tgttcgtcctcctcaggctgctccgacgacagtgagggtgaagaggcttcttgtggcggg
aagctgtttgaggaggaggaatcctcgctgctctccctgcccacttcccacgaggggaac
tccccgcagcctagtgcctcggatctgctgctccaggagcgccaaagggcccacgagtgg
ccaaaggaccgtgtcctcatcacccgtatcgacttggtgtgccaggctgtgctgtccgga
aagtggccctctccacaacagggccaggtagtgtcctgcgttggccagggagagggcctg
ccccacttgcacggagagtacaccacctcccccatccctcacatctgccctctggcatca
caagaggaaggcacagcttccttcacccgcctccgacacggtggccaagagaaggagttt
accgtgcagatcaaagatgaagaaggaatcaaactgactttccaaaagcacaagctggtc
cctaatggcaccgttcgggataggcctgctctcacccagaagaaaagtagcaagaaaatg
gtggagctggaactgcagtgtctggaagcactgagaggcccagatatcgacctggaggct
catatcccagtggtgaacaagacagacgggacgctgctggtgggcgacgcggctccccgc
cgggctgatctcgaagtgtggctgcaagcccaccctgagtatgcggtagatcctcgcttc
ttggcttacatggaagaacgccggaagcacagatggccccggttcccaaaacctgttccg
atagagccaaactgtctggtagggctggagaggatgcaggtagctggcatttctgccaac
ggtaaaaagggttttcttccggatccgacgatgaatcgcctccttccaggagccgtgggg
gccgacaacgcacagaaacgcagtcgccagaccccaatggagttttccaacatgatggcc
ctgatgggagctggccgggtccaactaggagccacgggacccctctctctgcaccaccac
gcccacttccaaaccaccccagcccatggctccgccttgcaatacatgccgttccccgcc
gccgctgcggccactgctgccaccacctctggcacccttctccatccgggactgggccac
gccggctacgccgccgcccccttgcacctgggccaccctcagcgtgtggacgaagacgag
gaggaagacgagatggatgacttgtctcagggctacgccagctcagaacgggacttttcc
ttgctggacgacgaccccatgatgccggccaactccgactccagcgacgaaggggaggaa
gaaggagaggactga
DBGET
integrated database retrieval system
