Pituophis catenifer annectens (San Diego gophersnake): 139324741
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Entry
139324741 CDS
T11059
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcae03041
]
139324741 (DDX43)
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139324741 (DDX43)
Spliceosome [BR:
pcae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139324741 (DDX43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
SNF2-rel_dom
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
139324741
NCBI-ProteinID:
XP_070810587
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MSDWDTDGEEDQPRASHTKLPPSEWYSLGTAGSSTRPVGKEKEERRGGNRWGSRPPSARQ
SGTLEYRARGGGRGGGGGGGRQRPGSPPLCFPLDNALVGTVIGRGGTKIKELEESSGCKI
QVIKGNYEAEVKIFGGKDKQTKAKMLIDNLIERYNQNNTGERDTKDSCKYQEIGNTSYGQ
SVIISSEVSSPKPSINWASLRENKAKYEAMKWIDLPPLEKCFYKEAPNIAFMSQEEVDKW
RKENNSISCDDLKDGEKRRIPNPVCKFEDAFKHHPDIMANIKKVGFEKPTPIQSQAWPII
LQGFDLIGIAQTGTGKTLAYLMPGFIHLDSQPISREKRNGPGMLVLIPTRELALQVEAEC
LKYSYKGIKSICIYGGGDRKGQINTVTKGVDIVIATPGRLNDLQMNSFINLRSITYLVLD
EADRMLDMGFEPQIMKILLDVRPDRQTVMTSATWPSGVRRLAKSYLKDPMIVYVGTLDLA
AVNTVEQKIIVIPEEEKRAFTHHFVDTMKSDDKAIIFVGKKLTADDLSSDFGLQGIPVQS
LHGNREQCDREQALDDFKKGKVRVLIATDLASRGLDVHDITHVFNYDFPRNIEEYVHRVG
RTGRAGRKGEAITLVTRSDWRIASELIDILKRGNQVIPEELILMAERYKQFRLKREIENG
LGRSRGRPQKGF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactgggataccgacggcgaagaggaccagccccgcgcttcccacaccaagctt
cccccgagcgaatggtattcgttggggacggccggatcttctacccggccggtgggaaaa
gagaaagaagagagacgcggcgggaacagatggggttcgcggccgccgtctgcccgccag
tctgggaccttggagtatcgggcaagaggaggagggagaggaggaggaggaggaggagga
aggcagcgaccgggatcgcccccgttgtgcttccccctggataatgctctcgtcggcacc
gtcataggtcgaggtggaactaaaattaaggagcttgaagaatcatcaggttgcaaaata
caagttataaagggaaattatgaggctgaagtaaagatatttggtggaaaagataaacaa
accaaagctaaaatgctgattgacaatcttattgaaaggtataatcaaaacaatacagga
gaaagagatactaaagattcctgtaaataccaggagattggaaatacttcatatggtcaa
tctgtgattatcagttctgaagtcagtagtccaaaaccatcaattaactgggcctccctt
cgagaaaacaaagctaaatatgaagccatgaagtggattgatttgcctccacttgaaaag
tgtttttacaaagaagccccaaacatcgcttttatgtcacaagaagaagttgataagtgg
cgaaaagaaaacaatagtatttcatgtgatgatttgaaagatggtgaaaaacgtcgtatt
cctaatcctgtttgtaaatttgaagatgcttttaaacatcatcctgacattatggcaaat
attaaaaaagttggttttgagaagcctactccaattcagtcacaggcttggccaatcata
cttcaaggatttgatctcattggaatagcacagacgggtactggaaagacactagcttat
ttaatgcctggattcattcatttggattcacaaccaatttctagagaaaaacgcaatgga
ccagggatgctggttctcattccaactcgagaactagcccttcaagttgaagcagagtgc
ttaaaatactcttataaaggaattaaaagcatttgcatatatggtggtggagatcggaaa
ggacagatcaatacggttaccaaaggcgtggacattgttattgctactcctggcagattg
aatgacctgcaaatgaacagtttcataaatctgagaagcataacatatttggtattggat
gaagcagacagaatgttggatatgggttttgagcctcaaataatgaagatactgttagat
gtacgtcctgatagacaaacagttatgaccagtgctacatggccaagtggtgttcgccgt
cttgcaaaatcatacttgaaagatccaatgattgtatacgttggaactctagatttagcg
gcagtcaatacagtagaacagaagattattgttattccagaagaagaaaaaagagctttc
acacatcatttcgttgatactatgaagtctgatgacaaggccatcatttttgtgggaaag
aaacttacggctgatgacctttcaagtgattttggacttcagggaattcctgttcagtct
ttacatggcaacagagaacagtgtgatcgtgaacaagctttggacgatttcaaaaaaggc
aaagttcgtgtattgatagcgacagatttggcttcccgtggacttgatgtgcatgatatt
acgcatgtctttaattatgattttcctcgtaacattgaagaatatgttcatagagtggga
cgtactggacgagctggacgcaaaggagaagctataacgcttgtcacaaggagtgactgg
cgaattgcatccgagttgattgacattttaaaaagaggaaaccaggtgattcctgaagaa
cttattttgatggctgaaagatataagcaattccggttgaaaagggaaatcgaaaatggt
ttaggaaggtcacgggggcggccacagaaaggtttctag
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