KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139325082
Entry
139325082         CDS       T11059                                 
Symbol
ARPC1B
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04144  Endocytosis
pcae04517  IgSF CAM signaling
pcae04530  Tight junction
pcae04810  Regulation of actin cytoskeleton
pcae05100  Bacterial invasion of epithelial cells
pcae05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    139325082 (ARPC1B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139325082 (ARPC1B)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    139325082 (ARPC1B)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    139325082 (ARPC1B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139325082 (ARPC1B)
   05100 Bacterial invasion of epithelial cells
    139325082 (ARPC1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcae04131]
    139325082 (ARPC1B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pcae04812]
    139325082 (ARPC1B)
Membrane trafficking [BR:pcae04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    139325082 (ARPC1B)
Cytoskeleton proteins [BR:pcae04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     139325082 (ARPC1B)
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WDR55 Beta-prop_EML Beta-prop_Aladin Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st eIF2A Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st RMC1_N PEP5_VPS11_N Tricorn_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th DUF7331
Other DBs
NCBI-GeneID: 139325082
NCBI-ProteinID: XP_070810906
LinkDB
Position
Unknown
AA seq 369 aa
MAYQSFLLEPITCHAWNKDRSQLAISPNNHEVHIYKKNGSKWDKIHELKEHNGQVTGIDW
APDSNRIVSCGTDRNAYVWTLKNDVWKPTLVILRINRAACCVKWSPKENKFAVGSGSRRI
SICYFEQENDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP
APTPWGSKMSFGELMFESKSSYSWVHSICFSDSGNRLAWVGHDSTICLADANKKMAVACL
STETLPLLAVTFITENSLVAAGHDCYPMLFAYNEQQGTLSFGGKMDIPKQSSQRGLTARE
RFQNMDKKGSSDTNNASLDTVHKNSISQISVMAGGKGNCSKFCTTGMDGGMSIWDVKTLE
AAMKGLRMK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcttatcaaagcttcctgctggaacccatcacttgccatgcctggaacaaggatcga
agtcaactcgccatctcccccaacaatcacgaagtccacatctacaagaaaaatggctcc
aaatgggacaaaatccacgagctgaaggaacacaacgggcaagtaacaggcatcgactgg
gcccccgacagcaaccggattgtgagctgcgggacagaccgcaacgcttacgtctggacc
ctaaagaacgatgtttggaagcccaccctggtcattctccggatcaatcgcgctgcctgt
tgtgtgaagtggtccccaaaagagaacaagtttgctgtgggcagtggatcccggaggatc
tccatctgctactttgagcaggagaacgattggtgggtctgtaagcacatcaagaagcca
atccgatcgaccatcctctgtctggactggcacccaaacaatgttctcctggcagcgggt
tcctgtgacttcaagtgcaggattttctcggcctacattaaagaggtggaagagcggcca
gcccctactccttggggatctaagatgtcgtttggggagctcatgtttgagtcgaagagt
agttacagctgggtccacagcatctgcttttcggacagtggtaaccgtctggcctgggtg
ggccacgacagcaccatctgcctggcagatgccaacaagaaaatggctgtcgcctgcctt
tctacagagactctgcccctcctggctgtgaccttcatcactgagaacagtcttgtggct
gcaggacatgactgttacccaatgttgttcgcgtacaatgaacagcagggcaccttgagc
ttcggagggaaaatggacatccccaagcagagttcccaacggggactcacagctcgggag
cgtttccagaacatggacaagaagggcagctctgataccaacaatgcttctctggacaca
gttcacaagaacagtatcagccaaatctctgtgatggcaggcgggaaggggaactgctcc
aaattctgcaccaccggaatggatggcggcatgagcatatgggacgtcaagaccttggag
gctgcaatgaaaggcctccggatgaaataa

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