Pituophis catenifer annectens (San Diego gophersnake): 139325128
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Entry
139325128 CDS
T11059
Symbol
WDR90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcae03037
]
139325128 (WDR90)
Cilium and associated proteins [BR:
pcae03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139325128 (WDR90)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_EML
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_1st
CFA20_dom
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_NWD2_C
PEP5_VPS11_N
PROPPIN
Beta-prop_RSE1_2nd
WD40_RFWD3
Beta-prop_Nup120_160
eIF2A
Beta-prop_WDR35_TULP_N
WD40_like
BBS2_Mid
Nucleoporin_N
B-prop_COPA_B_2nd
WDR54
SGL
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
139325128
NCBI-ProteinID:
XP_070810969
LinkDB
All DBs
Position
Unknown
AA seq
1861 aa
AA seq
DB search
MAKVWQHPYLNIFKHFKVEEWKRSTKDGDVTTFMDKTLKGTVYRISGAVPASNYLQLPKT
GTQSLGLTGRYIYILFKPAPGKYFVVHLDVATEDSQVVRISFSNLFKEFKSTATWLQFPY
ICGAARGSVYESTAKTSKRDLVGLAPINVRWTCLILDLRHILGLYLNRTYSHLKSVKLCS
NLLVKNLFTSDLLFDPALTSSEAHQSKMALHGFSPMPREMAFPVPKGELWHDLYDYIRFP
SDGSKMPYDSIQKSTSNSYAAGHPEDEPVTLVPKDVSLSKPIRDRVSLIQQITSPKEMPR
QSPLLTKHIPKIHPSRSEPVWTSCIADQSLREGSQARGVSRFPHSSMDDGSIHVYAHKNG
DDAVRDVTIDSDENQYMPTAGPKTISAKSSVPCTKLLPDPILKLKKIIGFGGCSTKWALW
ASGSAVVVYPCHALIVAIAIDSGKQTFFAGHTDKVAALAFNNKSTLLASAQTGEMSVMRL
WDFPSGKCLCVFKTGIQSISCLSFSYSGNVLCGTGKDKRGKTLVVVWNTMQVNRGGEVVM
LAKAHTDVDIRAFKIAFFDDTRMVSCGRDNVRLWRIQSGALRSCPVNLGEYRSLEFTDLA
FEVGHSTQREPEDRTLFVCSRSGHVLEIDYKNVTVKNVRRLLPLETGPVPQREKQAFNSG
PGISLNSICLSSSFCATASDDGYLRLWPLDFSEVFLEAEHNNPVSSVRISPDNLKVLCTT
TTGNVGCLDIQSRNYSTIMRSHVGTVLAFSVDSSQKQLVTVSEDNTIRIWNVESMQQLYE
FTASDEIPCAVAFHPLQPIFACGFDTGVVRTISLAASRLLEEHKQHRGLITGLTFSPDGN
FMYSSCTHGTLSLYNCAIQKSHTVRVLANVVSQDADHGPDALSVSCDGRLLAFVGPSKYI
VSLMDAHTLDELLRIDVSILDLDSTALDVAVRLCFAPFGHLLVSTSSQKVLVLDAKSGRL
IRVVPQVHRQTCSSLTLSPDGRYVLTAGDRTIKVWDYEMRFDVSCQVFIGHSEPIQQVRF
TADQKQVFSVGDAIFLWDFLGVFAEEPFKDEIDSPGPLVVLQVDANSGKAQNSPPGSSDA
PRQLVPLPTVVSPPCLDLSALHRLVEHDTWSDSEEEKEAYLKKKNGDTINGTTGHSVLVL
NDVVQHEEPLPVKPDITPICSSPHSPAGGDRGKETKGSLPQNIIRPDCYRHFIPRFKSSA
TSKVFSSPTANEGLKLKAVIGYNGNARGNMVWNPDTGFFAYSCGCVLIVEDLHSGSQQHW
LGHPEEISTLALSHNAQVLASASAQGGGDLRCQICIWNVQNRTCEKILFHHENQVQAMAY
SQDDRFLVTLGDYVDRDIALWNTQTYDLMSSTRLAEPVHDLAFNPLSVGQLACVGKGAVT
FWLMKQQGSDISLKVQRVPAPDAIGGVELTSMCYSSGCLLYTGTSTGQICSWDTETNCCF
MTWEAVDGEIGVLQCRHNRLVSGSNTKKIQMWSVAAVQELRVKGSDARSNSVLLEQEITL
DGTIVSAAFDDAMDMGIVGTTAGTLWYINWTENTSIRLISGHKNKVSEVAFSPGESHFAT
CAEDGSVRVWSLASLELVVQFQVLNQSCLCLAWSPVPTSINGLESHHIVAGYSDGTIRLF
SISRTEMELKMHPHSVAVMALGYSADGQIILSGSKDGLIAINSPRTGMTIRVLTDHRPSA
INVIHCTRKPYTELGTEGSDLWLASSSDRRVSVWISDWLKDKCEIIDWLSFPAPTGPEIP
SPLPPSLAAFCPWDKSTIAYIGFGLQKEILFYSLQQKQVIEKIPLPSFAASLSLSPVACS
IAVGFSERMLRLIDRATRTSEDYAGHNDTVSLCRFAPSGKRLFTASYNEILVWEVQSSSP
K
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgtggcagcatccttatctgaacatcttcaaacactttaaagtagaagaa
tggaaaagatctaccaaggatggggacgtgacaacctttatggacaagactttgaaaggg
acagtatatcgcattagcggtgctgttccggccagcaactacctccagcttcccaaaact
ggcacccagtccttgggtctcactggtcgctatatctacatcctgttcaaacctgcacca
ggcaaatattttgtggtgcatctggatgttgccactgaggacagccaagtggtccgtatt
tcgttctctaacctctttaaagaattcaagtccacagccacatggttgcagttcccatat
atttgtggggcagcccgtgggtcagtctatgaaagtacagccaagacttctaaacgagat
ctggtgggccttgcccccatcaacgtgcgatggacttgcttgatcctggatctccgccac
attctcggcctctacctgaacagaacctacagtcatctgaaaagcgtcaagctgtgctcc
aacctgctggtgaaaaacctcttcaccagcgatttgctctttgacccagcgttgacctct
tctgaggctcaccagtccaagatggcattgcatggtttctctcccatgcctcgggaaatg
gcatttcctgtgcccaaaggagaactgtggcacgatctctatgattacattcggttccct
tctgatggatccaaaatgccatatgactccattcagaaaagcacttcgaattcctatgct
gctggccatcccgaagacgagccagtgaccctggttcccaaggacgtgtctttgagcaag
ccaattcgggaccgggtgtctctcatccagcaaatcaccagtcccaaagagatgcctcgc
cagtctcctcttcttacaaagcacatccccaagattcacccgtccaggtccgagcctgtg
tggacatcctgcattgcggaccagagcctgagagaagggtcacaggccagaggagtttcc
cgtttcccccactcttcgatggacgatggcagcattcatgtttatgcccacaaaaatgga
gatgacgcggtccgtgatgttaccatcgactctgacgagaaccaatatatgccgacagca
ggaccaaagaccatctctgccaagagttctgtgccctgcacgaagctgctaccagatcca
attctgaagctgaagaagattattgggtttgggggatgcagcaccaaatgggcattgtgg
gcttctggcagtgctgtagtggtctacccttgccatgctctgattgtagccatagcaatt
gattctggcaaacagacgttttttgctggccacaccgacaaggtggcggcactggcgttc
aacaacaaaagcactttgctggcatccgcgcagacgggagaaatgagcgtgatgcgtctc
tgggacttcccaagcgggaagtgcctttgcgtctttaaaactgggatccagtccatctcg
tgcctcagtttttcatacagcggaaatgtcctttgtggcaccgggaaggacaaacgcggg
aagacgttggtggtggtgtggaacaccatgcaggtgaatcgtggaggagaagtggtcatg
ctggccaaagctcacacagatgtggacattcgggccttcaagattgccttttttgacgat
accaggatggtatcgtgtggccgtgacaatgtgaggctgtggcggatccaaagcggggct
ttgcgttcctgccctgtgaatttgggcgaataccgttctctggagttcacagacctggcc
tttgaggtcggccactccacccagcgtgagcccgaggaccggacgctatttgtttgcagc
agaagtgggcacgttttagaaattgactacaagaatgtcactgtcaaaaatgtccgtcgc
cttctgcccttggagacgggacccgttcctcagcgggagaagcaagcttttaattcaggc
cctgggatatccctaaacagcatttgcctctcttcaagtttctgtgccactgcctctgac
gatggctacctgcgactgtggccattggacttctcagaagtcttcctggaggcagagcac
aacaatccagtgagttcggttcgaatcagcccagacaatctgaaggttttgtgcaccacc
accactgggaacgtgggctgcctggacatccagtcgaggaattacagcaccatcatgaga
tctcatgtgggcacggtcttggccttttcagtggacagttcccagaaacagctggtgacg
gtgtccgaagacaataccattcgcatctggaatgtcgaatctatgcagcagctttatgaa
tttacggcctctgatgaaattccgtgcgctgtggcttttcatcccttgcaacctattttt
gcttgcggttttgacactggcgtggtcaggaccatcagcttggctgcctcaagactactt
gaagaacacaagcagcaccggggtctgatcacgggtctgaccttctctccagatggcaat
ttcatgtacagttcctgcacgcatgggacgctgagtctttataactgcgccatccagaaa
agtcacactgtccgagtgttagctaacgtggtgtcccaagacgctgaccacggtcctgac
gctttgtctgtcagttgcgatggacgtctcttggcctttgtgggaccttccaaatacatc
gtctccctcatggacgctcatactctggatgagctactaagaatcgatgtgagcatactg
gatctggacagcacggcccttgatgttgcagtgaggctttgcttcgccccttttggccat
cttttggtgtcaacctcctcccagaaggtcctggtgctggatgccaagtctggacgctta
atccgagtggtccctcaagttcacagacagacttgttcttctttaacgctgagtcccgat
ggccggtatgttctcacagccggtgataggactatcaaagtgtgggattatgaaatgaga
tttgatgtcagctgccaggtgttcatcggtcactccgaaccgatacagcaggtgaggttc
actgctgatcaaaagcaggtcttcagtgttggagatgccatcttcctgtgggatttccta
ggtgtctttgcagaggagcccttcaaggatgagatcgattcccctgggcccttagtggtt
cttcaagttgacgccaattcagggaaggcacaaaattcacctcctgggtccagtgatgcc
ccccgccagctggttcctttgcctactgtggtgtctcctccgtgtctggatctcagcgct
ctccaccgactggttgagcatgacacttggtctgactctgaagaagaaaaagaagcctat
ttgaaaaaaaagaatggggacacgattaatgggactactggccactcagttcttgtgcta
aatgatgttgtccaacatgaagagcctctgcctgtgaaacctgacatcactccaatttgt
tcaagccctcacagtcctgcaggaggggacagaggaaaggaaacgaaagggtctttaccc
caaaatatcatccggccagattgctaccggcacttcataccccgtttcaaatcttctgca
acttccaaggtattttcttctccaaccgctaacgagggtctgaagctgaaagctgtgatt
ggctacaacgggaatgcccgagggaacatggtgtggaaccctgacacaggtttctttgcc
tacagctgtggttgtgtgctgattgtggaagacttgcactctggatcccaacagcattgg
ctgggtcatccggaagagatttcaaccttagctctcagtcataatgcccaggttctggcc
tctgcctctgcccaaggtggtggagacctgcggtgtcaaatttgcatctggaacgtacaa
aataggacttgtgaaaaaatcctctttcatcatgaaaaccaagtgcaagccatggcatat
tctcaagacgaccgcttccttgtcactctaggagattatgtagacagagacattgccttg
tggaacacccagacttacgacctcatgtcctccacccgtcttgctgagcccgtccacgac
ctggcttttaatcccctttccgtgggacagcttgcctgcgtggggaagggagctgtgacc
ttctggctgatgaagcaacagggctcggacatcagcctcaaagtccagcgagtcccagct
cctgatgctattggtggggtggagctcacatccatgtgctacagctctggttgtctactc
tacactgggacaagcacaggacagatctgcagctgggacacggagacgaattgctgcttc
atgacttgggaggccgtggacggtgagattggagtactgcagtgtcgccataaccggctg
gtcagtggcagcaataccaagaagatccagatgtggtcagtggccgcagtccaggagctg
agagtcaaaggatctgatgccagatctaactccgttctcttggagcaggaaatcactctc
gatgggaccattgtgagtgccgcttttgatgatgccatggacatgggcattgtgggcacc
accgcagggaccttgtggtacatcaactggacagagaacaccagcatccggctgatcagt
ggccacaagaacaaggtgagtgaagtggccttcagtcccggagagtctcattttgctacc
tgtgcggaagacggtagcgtcagggtttggtccctggctagcttggagctggtggtgcag
tttcaagtcctcaatcagagttgcttgtgcttggcctggagcccagtgcccacctccatc
aatgggctcgaaagccatcatattgtggcaggctatagcgatggcaccatccgcctattc
agcatttcccggacggagatggaattgaaaatgcacccgcattccgtggccgtcatggca
cttggatattctgcagatgggcaaatcatcctatcaggaagcaaggatggattgattgcc
attaatagcccacgtacagggatgaccatcagagtccttactgaccaccgaccctcggcc
attaacgttatccattgcaccagaaaaccatacaccgaacttgggactgaaggaagcgac
ctctggttggcttccagcagtgatcgacgggtcagtgtctggatttctgactggttgaag
gacaaatgtgagatcatcgattggttaagctttccagctcccacaggtcctgagattccc
agtcctctacctcctagcctggcagcgttttgcccttgggataaaagtactattgcttac
attggctttggattgcagaaagagatcctcttctacagcttgcaacagaaacaggtcatc
gagaagattcccttgccttcctttgccgcttcgctgagcctttctccagttgcctgcagc
atagctgttggcttcagcgaacgtatgctgaggctgattgatcgcgcaacaaggacatcg
gaggactacgcgggacacaacgacaccgtttccctctgcagatttgccccctccgggaaa
cgcctcttcacagcctcctacaacgagatcctggtgtgggaagtccagagcagctcacca
aagtag
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integrated database retrieval system
