Pituophis catenifer annectens (San Diego gophersnake): 139325176
Help
Entry
139325176 CDS
T11059
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139325176 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcae02000
]
139325176 (ABCA3)
Transporters [BR:
pcae02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
139325176 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
AAA_22
AAA_30
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
139325176
NCBI-ProteinID:
XP_070811047
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MSEKMAVSRQFGLLLWKNYILQKRKILVTLIETCLPLLFAAILIGLRHRVHSVNHPNATL
YHSKQVDRLPSFFHRWHSGVPWELAFVPSNNTAVQNIAERVEKDLKIKVRWFPSEKEFEH
YIRFDNRSGNILAGVVFENCVANSQDPLPLQVSYRLRFKYSPRNAPPSERTGLNPNLDRE
WHTHYLFPLLQLPGPREAKSDDGGTPGYFREGFLAVQHAVDMAIIKHHANTSSDLRDRVN
VTVRRFPYPPYVNDLFLIAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMRMMGL
SNWLHWSAWFFLFFLFLLVSIFFVTILFCVKVSGQGAVLPNSDPTLVFTFLAVFCISTIS
FSFMVSTFFSKANVAAAAGGFLYFFSYIPYFFISPRYDHMTHSQKLSSCVISNVAMAMGA
QLIGMFEGKGTGIQWGNLMKAVSVDDNFTMAHVLGMLLLDSGIYGLVAWYMENVFPGEYG
IPQPWYFFVMPSYWCGSPQTVLGKEKEEEEDPEKALKSQFIEEEPSDLVSGIKIKHLSKV
FKVGNKTREAVKDLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLYPPTSGQAYINGYEIS
QDMVLIRKSLGLCPQHDVLFDHMTVEEHLYFYSGLKGFPVEKCPGEIAHVLHILNLQEKH
GTLSKALSGGMKRKLSIAIALIGDSKVVMLDEPTSGMDPVSRRATWELLQQQRRTRTILL
TTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKHKYGAGYHMVMVKEPYCNLGEISHLIY
HYVPNASLESNVGAELSFILPKESTHKFEALFTELELRREELGIASYGASVTTMEEVFLR
VGKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSMSGLTNTTDDSGALITEDCSNIK
LNTGFYLCCQQFYAMFMKRAVYSWRNWKMVAAQFLVPLIFTAFALIAAKTFPGPQDSPLL
KLTLKPYGQTTVPFSVSQGSSLGERLAAQYKDVVGAQRQEPLEVVGNLEEYLISRASEEA
GAFNEYHIAAASFQETSDKINITALFNNQAFHSPATALLLVDNALLRLIVGPNASIAVAN
YPQPRNMTETAKDQLMESQTGFAIAINLLYGMASLSSTFALLLVSERSIKAKHVQFVSGV
YMVNFWLSALLWDLINFLTPCTLILVIFQAFDIKAFTQDSHLVDIMQIFLLYGWAIIPLM
YLLSFFFSIAATAYTRLTIFNIFSGTATFLAVVIMSIPELGMVDLSNTLDKVFLTLPNYC
LGQSISKFYQNYEFIQFCTSSFESVLICKVFNITYQTNYFAWESPGVGKYLTAMAAQGLS
FLLLLFLIETNLLWRMRTIVCDIRRRRKWVMLLNQVPVLPEDRDVADERKKVLESPVASI
SSLNSPLVIKELTKVYSSRDSCLAVDRISLVVSKGECFGLLGFNGAGKTTTFKMLTGDES
ITSGDAYVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSMYARLRGIPERYISSC
VENMLRGLLLEPHANKLIRTYSGGNKRKLSAGISLIGGPPVVFLDEPSTGMDPVARRLLW
DAVARTRECGKSIIITSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLIAK
THCDEEGHVEDFKAFVEKTFPESVLKHEHQGMVHYHLTNKNLSWAQVFGTLEKAKEKYCI
EDYSVSQISLEQVFMSFTRFQHYTEDCEK
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagatggctgtgtcacggcagtttgggcttcttctctggaagaattacatc
ttgcagaaacggaagattttggtcacgctgatcgagacgtgtctccccttgttgtttgcc
gccatccttattggcctgcgccatcgtgtccattcggtcaaccaccccaatgccacctta
taccacagcaagcaggtggacaggctgcccagtttcttccatcgctggcattcgggcgtc
ccctgggaactggcgttcgtcccctccaacaacacggccgtgcaaaacatcgccgagagg
gtggagaaagacttgaagatcaaagttcgatggtttccgtctgaaaaagagtttgaacac
tacatccgttttgataaccgatcgggcaacatactggcaggagtggtttttgagaactgt
gtggctaacagccaggatcccttgccactccaggttagttaccggctacgattcaaatat
agccctagaaacgctcctccgagtgagaggacaggattgaatcccaacttggatcgagag
tggcacacccattacctcttcccattgctccagttgccaggacccagagaggcaaaaagt
gatgatggaggcacaccagggtactttcgtgaaggtttccttgcagtccaacatgcagtg
gatatggccatcattaagcaccatgccaacacatcttctgatctgcgggatcgggtgaac
gtgactgtccgtcgctttccttatcccccttatgtcaatgacctcttcctcattgctatc
cagaaccagcttcccttgctactcatgctgagcttcacctacacctccctcaacattgtc
cgcgctgtggtacatgagaaggagaagaagctgaaggagtacatgcgcatgatgggactc
agtaactggctacactggagcgcatggttcttcctcttcttcctcttcctcttagtgtcc
atcttctttgtgaccatcctcttctgtgtcaaggtgagtggacagggagcagtcttaccc
aacagcgacccaactctggtcttcactttcctggcagtgttttgcatctccaccatctcc
ttcagcttcatggtcagcaccttcttctcaaaagccaatgtagccgcagctgcgggaggt
ttcctctattttttctcctacattccgtacttttttatctccccccgctacgaccacatg
actcacagccagaaactctcgtcctgtgtgatctccaacgtcgccatggcaatgggggca
cagctgatcggcatgtttgaagggaaaggcacggggatacagtggggaaacctgatgaaa
gctgtcagcgtagatgataacttcacaatggctcatgtcctggggatgcttctcctggat
tctgggatctatggcttggttgcttggtacatggagaatgtgtttcctggagaatatggc
atcccacaaccctggtacttctttgtcatgccttcttactggtgcgggagcccccagacc
gttctgggaaaagagaaagaagaggaggaagatccagagaaagctttgaaaagtcaattc
atagaggaggagccttcggatttggtgtcgggcatcaaaatcaaacacctttccaaggtg
ttcaaagtgggaaacaaaaccagagaagctgtaaaggatctgactctgaatatgtacgaa
ggacaaatcaccgtccttcttggacacaacggagctgggaaaaccaccactttgtccatg
ctgacaggactgtaccctccaacaagtggacaggcgtacatcaatggctacgaaatctct
caagacatggttctcatccggaagagcctgggtctgtgtcctcagcacgatgtcctcttt
gaccacatgacggtagaagagcatctgtacttctactctgggctgaaaggatttcctgtt
gaaaaatgccctggggagatcgcccatgtcctgcacatcctcaacttacaagagaaacat
gggactttgtcgaaggccctttccggagggatgaaacgcaagctctccattgccattgct
ctcattggggactccaaggtggtgatgttggatgaacctacctcaggcatggaccccgtt
tcacggcgggccacgtgggagctccttcagcagcagcgcagaactcgcaccatcttgctc
accacccatttcatggatgaggcagacctgttgggcgaccgcatcgccattatggccaag
ggggaactccaatgttgtggatcatccctctttctcaagcataaatatggtgctgggtac
cacatggtgatggtgaaagagccctactgcaacctcggagagatctcccacctcatctat
cattatgtccccaacgcctctctggagagcaacgtgggggcagaattgtccttcatccta
cccaaggagagcacgcacaaatttgaggctctgttcaccgagctggagttacgccgggaa
gaactgggcattgccagttatggagcttcagttaccacaatggaagaggtcttccttaga
gttggcaagcttgtggattccagcatggacatccaagccatccagctgccagctttgcag
taccagcatgaacggcgatccaacgactgggccatggatgattccagcagcatgagtggc
ctgacgaacacgaccgatgacagcggggcactcatcaccgaagattgctccaacattaag
ctgaacacagggttctacctctgctgccaacagttctacgccatgttcatgaagagggcg
gtgtacagctggcgcaactggaagatggtagcagcccagtttttggtgcctcttattttc
actgcttttgccttgatcgccgccaagaccttcccgggacctcaagactctccgttgttg
aagctgactttaaagccgtacggacaaaccacggtgcctttctccgtctcccaaggctcc
agcctgggcgagaggctggcagcgcagtacaaggatgtggttggtgctcaacgccaggag
ccgttggaggtggtagggaacctggaggaatacttgatttctcgagcatccgaagaagcc
ggagcttttaatgagtaccacatagcggcagcttctttccaagagacctcggacaagata
aacatcaccgctcttttcaacaaccaagcgtttcattcgcctgccactgcgttgctactg
gtggacaacgccttgttgaggctaatcgttggaccaaatgcctccatcgccgtggctaac
tatccacaacctcgcaacatgaccgagacggcgaaggaccagctcatggaaagccagacg
ggtttcgcgatcgccattaacttgctctacggaatggcctccttatccagcacctttgcg
ctcctgctggtcagcgagaggtccatcaaagccaaacacgtacagtttgtcagcggtgtt
tacatggtgaacttctggctctcggcgcttctgtgggacctcatcaacttccttacacct
tgcaccctcatcctggtgatcttccaagcctttgacatcaaagcgttcactcaggacagc
catctcgtggatatcatgcagatatttcttctgtatggctgggccattatccccctcatg
tacctgctcagcttcttcttttccatagcagccacagcctacacccgcctcaccatcttc
aacatcttctctggcacagccacgttcttggctgttgtcatcatgagcattcctgagctt
ggaatggtggacctttctaacacgttggataaagtcttcctcaccctacccaactactgc
ttgggacaaagcatcagcaagttctaccagaattatgagttcattcagttctgcacttct
tcttttgagtcggtgctcatctgtaaagtatttaatatcacctaccagaccaactacttc
gcttgggaaagcccaggcgttgggaaatacttgacggctatggcagctcaagggctctcc
ttccttctcctgctctttctcattgagactaacctcctctggagaatgaggaccattgtt
tgcgacatacgacggcggcggaaatgggttatgttgcttaaccaggttccggtgctgcca
gaagaccgggatgttgctgatgagaggaaaaaggttctggaatctccagtagcatcgatt
tcttctctgaatagtcctctggtgattaaggagcttaccaaggtgtacagtagcagggat
tcttgtctggctgtggacagaatctcccttgtggtcagcaagggagaatgttttggtctc
ctgggtttcaacggggcaggcaaaaccacaaccttcaagatgctaacgggagatgagagc
atcacatcgggagatgcttatgtggatggacacagcatcctggccaatatcaaaaaggtc
cagcagcggattggctactgtcctcaatttgatgcacttttggatcacatgactggaagg
gagaccttgagcatgtatgcccgactgcggggcatccccgaacgctacatcagcagctgt
gtggagaacatgcttcgtgggttgctcttagaacctcacgccaataaactcatccgcaca
tacagtggtgggaacaagcggaaactgagtgcaggaatttctctcattggtggacctcct
gtggtgttcctggatgaaccctccactggcatggaccctgtggccaggcgcctattatgg
gatgcagtcgctcggacacgggagtgtgggaagtccatcattatcacttctcacagcatg
gaagagtgtgaagctctgtgcaccaggttggccatcatggtcaacgggcagttcaagtgc
ctgggcagccctcaacacctgaagagcaagtttggcagtggatataccctgatcgccaaa
acccactgtgatgaagaaggccacgtagaagacttcaaggcctttgtggagaagacgttt
cctgagagcgtcctgaagcatgagcatcaggggatggtccattaccacctcaccaataag
aacctcagttgggcacaggtgtttgggacactcgagaaagccaaagagaagtattgcata
gaagattactccgtaagccaaatctcgttggagcaagtctttatgagcttcacgcgtttc
cagcactacacagaagattgcgagaaatga
DBGET
integrated database retrieval system
