Pituophis catenifer annectens (San Diego gophersnake): 139325213
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Entry
139325213 CDS
T11059
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcae01001
]
139325213 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcae04054
]
139325213 (CIITA)
Enzymes [BR:
pcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
139325213 (CIITA)
Protein kinases [BR:
pcae01001
]
Serine/threonine kinases: Other
TAF1 family
139325213 (CIITA)
Pattern recognition receptors [BR:
pcae04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139325213 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
AAA_16
LRR_8
NB-ARC
LRR_9
AAA_22
Motif
Other DBs
NCBI-GeneID:
139325213
NCBI-ProteinID:
XP_070811098
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MDIFKQILPEVRDILLTASAPQVQAFLDSMLREGILSKEYYQSLLYEKDVDDLARKVALT
LLGKQAGPSNSIGLSSLQLSGNSTENAKNGAVSLRTRNWAGEFLLTPVLGFSYCLRVVTC
GKRKGLAAWPLCPGASRMAHHLELAMPAFLQKGRFESFLQDDVSPGGIPPETHCLQSETH
LASVNEMAVAPAVQASEVVSDDQDNPEVFYTVERDESGEVVCLCSDMGEAYDKIAALAEY
LLKDQQDAPADEHFESLFWDVGAAEGPGGCAEAKSWGPSSDPPEAKRQRLAHPPALCIVS
GDPLAIPLNPGQDGTDSPPDFHLQILVATVGPAGRSPEALGPSANGELWCIPRHGSNIQM
IFTFENAQRSCLPPDAPTSPGLVRAFCKELKEHFRRECRSGPGQPLGHLYLERDLVQHHL
DGRGGRSADLRRCQLGEKWEASVDRSSLFQMTRKNDLGSRVIVVLGKAGMGKSLLVQKIC
LDWADGHMPQFDFVFQFDCRRLSLLHGTYHDFRSLLSDSLGGSCQGIHEVYASLLKNPER
VLLLFDGMGDLKDPEGFSSASGSPPHGEAHGLGAILASLFQRKMLNGCTFLLTGRPKERL
PQYFPRVDTVLEVVGLSLEQASLCLARSFEGSSHWEQEADLIRASPYLFSHCCNPGLCRF
ICQAVFETRGQELPSTLTGLFVTYLLQKMASSTANCRALRYQGILALAEVSWSLGQRCQK
ALLSEQFPSADVKEFALKTGLMVEQRDVYVFSNFVVQNFLLALHLTFAKEIKGKKLTKYL
GLGARFRKFFSSGGLVPRFLSGLLFLKDELSRSLLFGKEGELDTEKMITRKQRCLSRFIR
KLSLRDFSPDRLLELLHCVHETEDQYLLNHLTLELGPDLSFLGFSLTPPDVSVLHSVLRR
SSKKFSLDLRGSCLHLDGLRKLVDLKNITKFRVSLGEAVALWKHLWDVQEWEALQTAMEK
FLVVPFRAKTLGDVDALLGLVQLQRDMAEGREDSAGSSSRLIPAIAGFLQLEFSLGPSSG
LEGFRKLADSLVAFSALQHLDLDSPDENEIGDEGVESLTRVLPRLASLETLNLSRNKITD
LGAELLAGALPSLRLLKTLSLYENNIGDAGAEHVAEVLPQMCALRVLDLHCNRMSAAGAR
CLTERLRRCPCIQSLALWNPMIPHGVLDHLQQLDSRIRRF
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggatattttcaagcaaatcttgccagaagtgagggatattttattaactgcttcggcc
ccacaagttcaagccttcctggactccatgctgagggaaggaattctatccaaggaatat
tatcagagcttactttatgaaaaagacgtggatgatttagcaaggaaggtggctctcacc
ctgcttggaaaacaggctgggccatcgaattccatcggcctctcttccttacagctttct
ggcaattctacagaaaatgctaagaatggagctgtctcactgaggactagaaactgggcc
ggggaattcctcctcacacccgtgttgggattttcctactgtttacgggtagtcacctgt
ggcaagagaaaaggactggcagcctggccactttgcccaggggcatccaggatggctcat
catctggaactcgccatgccagcctttttgcagaaaggacggtttgaaagtttcctgcaa
gatgatgtgagccctggagggatcccaccggagacccactgcctgcagagtgagacccac
ctggcatcggtgaacgagatggccgtggcgcctgcagttcaagcgtctgaggtggtcagt
gacgatcaagacaaccccgaggtgttttacacggtggagagggacgaaagcggagaagtc
gtctgcctctgctccgatatgggggaggcctatgacaaaatagctgcccttgctgaatat
ttgctgaaagaccagcaagatgccccggcggacgagcattttgaaagcctcttttgggat
gtgggggctgcagaagggcctgggggctgcgcagaggccaaaagctggggcccatcctcg
gacccccccgaagccaagcgccagaggctggctcacccgccggctctgtgcattgtgagc
ggggacccccttgccatcccgctgaaccccggccaggatggcaccgactctccacccgac
ttccacctgcaaattttggtggccaccgtgggccctgcgggcagatctccagaagcgctg
gggccctctgcaaatggggagctctggtgcatcccacgccatgggagcaacatccagatg
atcttcacctttgaaaacgcccagcgatcctgcttgcctccagatgcaccaacctcccca
gggttggtccgggctttctgcaaagagctgaaagagcatttccgcagagaatgccgttcg
ggccctgggcagcccctgggacacctttacctggagagggacttggtgcagcatcacctg
gacggcaggggcgggaggagtgcggacctgaggcgctgccagctgggagagaagtgggag
gcctccgtggacagaagcagcttgttccagatgaccaggaaaaacgaccttggcagcaga
gtcatcgtggtcttggggaaggcgggcatggggaaaagtcttctggtccagaagatctgc
ctggactgggccgatggccacatgccccagtttgactttgttttccaatttgactgccgg
aggctgagcctgctgcacggcacctaccacgacttcaggtccctgctctcggattccctg
ggtggctcctgccagggcatccatgaagtctacgccagcctcttgaagaacccagaaaga
gtcctcctcctttttgacggcatgggagatctgaaggatccagagggcttctcgtctgct
tctgggagcccaccccacggggaagcccatggccttggcgccatcttggcctccctcttc
caaaggaagatgctcaatggctgcactttcttactgactggacggcccaaagaaaggctc
ccccagtatttccctcgggtggacacggtcctggaggtcgtgggcctctccctggagcag
gcctcactctgtctcgctcgctcttttgagggctcttcccactgggagcaggaggccgac
ctgatcagggcctcaccttacctgttcagccattgttgcaatcctggcctctgccggttc
atttgccaggctgtgtttgaaacaagaggtcaagagctgccctccactctcaccggcctc
ttcgtcacataccttctccagaagatggcaagttcgactgcaaactgcagggccttgagg
taccaaggcatccttgccttggctgaggtctcttggtctcttgggcagcggtgccaaaag
gccctcttgagcgagcagttcccttccgcagacgtgaaggagtttgctctgaaaactggg
ctcatggtggagcagcgggacgtatatgtgttctccaactttgttgtccagaatttcttg
ctggccctgcatttgacttttgccaaagagatcaagggcaaaaaactcaccaaatacctt
ggtttgggggccaggttcaggaaattcttctcttcggggggcctggtgccccgtttcttg
tctgggttgctgttcttaaaggacgagctcagccgttccctcctttttggtaaggaaggt
gagttagatacggagaagatgatcacaaggaagcagaggtgtctctccagattcatccgg
aaactttcccttcgggatttcagtccagacagattgttggagctgctccactgcgtccat
gaaaccgaagatcaatacctcttgaaccatttgaccctggagctcgggccggacctctct
ttcttgggcttttcactcaccccaccagatgtcagcgtcctgcactctgtgttgagaagg
tcctccaagaagttctctttagacctgagggggagttgccttcacttggatggactcagg
aagctggtcgatctgaagaacatcaccaagttcagggtgtccctgggggaagctgtggcg
ctctggaagcacctgtgggacgtccaggagtgggaagccctgcagacagccatggagaaa
ttcctggtggtgcccttcagggcgaagacgttgggggacgtggacgcccttctcggcctg
gtgcagctgcagagagacatggcggaaggcagggaagactctgcgggctccagcagccgt
cttattccagccatcgctgggttcctgcaactagaattcagcctcgggcccagctctggc
ttggagggtttccgaaagttggcggattctttggttgccttctcggctcttcagcacttg
gacttggattcccctgatgaaaatgaaatcggagatgaaggggtggagtccctcacccgc
gtcctccctcgcttggcgtctctggaaacgttgaacttgtcccggaacaagatcaccgac
ctgggcgctgagctgttggctggagccctcccctccctgcgtttgctgaagaccctcagt
ttgtacgaaaacaacattggggatgcgggtgcagagcacgtggcagaggtgctgccccag
atgtgtgcgttgcgggtgctggacctgcactgcaaccggatgtctgctgccggagcccgg
tgtctgacggagcgcttgaggagatgcccctgcattcagagcttggcgttgtggaaccca
atgatccctcacggggttctggatcacctgcagcagctggattctcggatcaggagattt
tag
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