Pituophis catenifer annectens (San Diego gophersnake): 139325227
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Entry
139325227 CDS
T11059
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139325227 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcae03021
]
139325227 (CPSF4)
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139325227 (CPSF4)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139325227 (CPSF4)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139325227 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
139325227
NCBI-ProteinID:
XP_070811121
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MQELIANVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCDFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPPPTQPQQKPNNNTPLQRSSSLIQLTSQKSSPNQQRTPQVIGVMQSQNNSIGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctgatcgccaacgtggaccacatcaagttcgacttggagatcgcggtggag
caacagctgggcgcccagccgcttcccttccccggcatggacaagtccggtgctgccgtc
tgtgatttttttttaaaggcagcgtgtgggaaaggggggatgtgtccattccggcacatc
agtggtgaaaagacagttgtttgtaaacactggttacgaggcctgtgcaaaaaaggggac
cagtgtgaattcttgcacgagtatgacatgaccaagatgccagaatgttacttctattca
aaatacggggaatgcagcaacaaggagtgtccattcttgcacatcgacccagaatctaaa
atcaaagactgcccttggtacgaccgaggtttctgtaaacacggtcctctctgcagacac
agacacacaaggcgtgttatttgtgtgaattacttggtaggcttctgtccagaaggccct
gcgtgcaaattcatgcatcctcggtttgaacttcctatgggaacgacagagcagccgcca
ctgccgcccccaacacagccacaacaaaaaccaaacaacaacacgccattgcaaaggtcc
tcctctcttatccagctgacaagtcagaagtcttcccccaatcaacagaggaccccacag
gtcattggggtcatgcagtcccagaacaacagcatagggaacagaggcccacgccccctg
gaacaagtcacctgttataagtgtggtgaaaaaggacattacgccaacagatgcaccaaa
ggacatttggctttccttagtgggcaatga
DBGET
integrated database retrieval system
