Pituophis catenifer annectens (San Diego gophersnake): 139325230
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Entry
139325230 CDS
T11059
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139325230 (TRAF7)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139325230 (TRAF7)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139325230 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IP5PC_F
WD40_like
Beta-prop_SPT8
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
zf-TRAF
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
zf-C3HC4_4
Beta-prop_Nup120_160
zf-C3HC4_3
Sina_ZnF
WD40_MABP1-WDR62_1st
zf-RING_5
PKcGMP_CC
WDR90_beta-prop_4th
DUF641
MIOS_WD40
Filament
DUF16
DUF4164
KxDL
Motif
Other DBs
NCBI-GeneID:
139325230
NCBI-ProteinID:
XP_070811125
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MSANKNTRYNRFSSSNTPTVTLPENTNGTRMETTFGPTYSAVTTITKADGSSSYKQHRPT
PSSSSTLPFASRDEDDSMPPITRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLVF
AEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSDKCPVDNAKLTVVVNNIAVAEQI
GELFIHCKYGCRSSVSGKPSAFEVDPHGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCPP
LLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEMCKFEGLKEFLQQTDDRFHEM
QVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASML
NDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIK
VWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNP
VCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYSGSYQTI
KIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGT
VYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAV
DSTVKVWTC
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaacaagaatacccgctacaatcgtttctccagcagtaacactccaacagta
acactcccagaaaacacaaacgggacaagaatggaaactacttttggacctacgtattct
gctgtgactaccatcaccaaagcagatggaagtagttcatacaaacaacatcgcccgaca
ccctcctcctcaagtacactcccctttgcctcccgagatgaggatgacagcatgccgcca
atcacccgtcggtctgactctgccatctccgttcgttcgttgcattcggagtccaacatg
tccctgcgctcaacgttctctctccatgaggaagaggaggagccagagcctctggtgttt
gctgagcagccttctgtgaaactctgttgccagttgtgttgcagtgtgtttaaagatccc
gtgatcacgacctgtgggcacacgttttgcaggagatgtgccttaacctctgacaagtgc
ccagtggacaatgccaaactgacagtggtggtgaacaacattgcagtggccgaacaaatc
ggggagctcttcattcactgcaagtacggctgccggtccagcgtgagtggcaagccttca
gcctttgaggtggacccccacgggtgccccttcaccattaaactgagtgccaggaaggac
catgaaggcagctgtgactaccggccagtgcgctgccccaacaatcccagttgccctccg
ttgctcaagatgaacctggaggcacatctgaaggagtgtgagcacatcaagtgccctcac
tccaaatatgggtgtacattcataggaaaccaggatacatacgagactcacctggaaatg
tgcaaatttgagggtctgaaggagttcctgcagcaaacggatgaccgcttccatgagatg
caagtggcaatggctcagaaggaccaggagatcgccttcctgcgctccatgctgggcaag
ctttccgagaagatagaccagttggagaagaatttggaactgaagtttgatgtgctggat
gagaaccagagcaagctgagcgaagatctgatggagttccggcgagatgcctccatgctc
aacgatgaactgtctcatatcaatgcccggctgaacatggggattctgggctcctatgat
ccacagcagattttcaagtgcaaagggaccttcgttggccaccagggccctgtctggtgc
ctctgtgtctattccattggtgacttgcttttcagtggctcttctgacaaaaccatcaag
gtgtgggatacgtgtaccacttacaagtgccaaaagaccctggaaggtcacgatgggatt
gtcctggcactctgcatccaggggaacaaactgtatagcggctcagctgattgcaccatt
attgtttgggatattcagaccttgcagaaggtcaacaccatccgtgcacacgacaatcct
gtgtgcactcttgtctcctcgcacaacatgcttttcagcggctccctgaaagctattaag
gtctgggacattgttggcactgagctgaaactgaagaaggagctgacaggccttaaccac
tgggtccgggcgcttgtggcatcccagaatcacctgtacagcggctcctaccaaaccatt
aagatctgggacatccggaacctggaatgtgtacatgtcctgcagacatctgggggtagc
gtctactccattgcggtcaccaaccatcacattgtctgtggcacttacgaaaatctcatt
cacgtgtgggatattgagtcgaaagagcaggttcgcaccctcacaggacatgtgggcact
gtgtacgctctggcagtcatctctacgccggaccaaaccaaagtcttcagcgcctcgtat
gatcggtcattgcgggtatggagtatggacaacatgatctgtacgcagacactcctgcgc
caccagggcagcgtcacagcgctggctgtctctagaggccgcttgttctccggggctgtc
gacagcactgtcaaggtttggacctgctag
DBGET
integrated database retrieval system
