Pituophis catenifer annectens (San Diego gophersnake): 139325252
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Entry
139325252 CDS
T11059
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcae02000
]
139325252 (TMC5)
03037 Cilium and associated proteins [BR:
pcae03037
]
139325252 (TMC5)
Transporters [BR:
pcae02000
]
Other transporters
Pores ion channels [TC:
1
]
139325252 (TMC5)
Cilium and associated proteins [BR:
pcae03037
]
Other cilia and associated proteins
Stereociliary proteins
139325252 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2606
Motif
Other DBs
NCBI-GeneID:
139325252
NCBI-ProteinID:
XP_070811155
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MSFPYNDIIENPDYPDYHYSETLEIDKLRPSQRSTRNSDNPYAPFGDDNKEGEPVLIPLK
VVQSQDEAEYPPRDYGFELPSTNPYEKAYVNPSFEYEPESEEILPTTSHAFNIQDADSYS
DASERVNIVQRRSRRSNYATFARPSLLRLDPEYIEAKRREEEKLINDLSSMSTHERVKAI
QKIPKSMKEKREIRNRVLTERKKKSYNQDAQLNSCTQCFYNTALFFRQLKNSFVDCLQLF
QFWQKALKDIGSQFGTSIHSYFVFLTWLLMFNIFSFLINFSFLAIPQLIAAQPNHLSFTS
LEFLTGAGYFTNTVLYSGFYTNGTIANIENASPYYMQLAYIFTIGIYFIICFLSLIYSMA
KSFRNHIVMPQMHSGNAAKLLCIWDFNVVDEKAVQMNQKNISTQIKETLSEMHIESLKLS
PKQRILRLSIHLAMWFLSLGFAVASCAGIYFFSLVNLEFFLNEKNTQLENEAATLILPIV
VSLLNHVMPFLYSFSRLVEKFTYPRHQIYTAIIRNVILKISIIGILCYYWLNIVALSKVE
CWETFIGQDIYRLLIADFVCCLLGSFFGEFLLRIIGTKCWKKLGVPEFDIARNVLDLIYA
QTLTWIGIFFAPLLPAIQMITFFIIICVKKISLLQNCQPPRKAWRGSQMNTIFVFLLFFP
SFTGVLSVVAVTVWRRKPSEVCGPFRGLTAPFEAISGWISDLTSSPSSGWVVWIYHNLIE
STHFFFILSIIVLMFIYFFLQIIKGRKTMVKLLQEQIANAGKDKMFLLNKLRALQASKLP
SLRRQQERDLSLNQLPKEQNSVLLPSCVEPFLWTEDNESFTESVRHPAMATFNPEAGEIT
RNAGVSDALVLALRARQEAEWEMEDEESLKWK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccttacaatgatatcattgaaaatcctgactatcctgactatcactattcc
gaaacattggaaatcgacaagttaagaccttctcagaggagtactcgcaattcagacaat
ccttatgccccatttggggatgacaacaaggaaggagaaccagttctaatacccctgaag
gtagtacagagtcaagatgaggccgaatatccaccaagagattatgggtttgagttgccc
agtacaaacccatatgaaaaggcatatgttaatccttcctttgaatatgaaccagaatct
gaagagatattacctactaccagccatgcttttaatattcaggatgcagacagttattca
gatgcatcagagagagttaatattgtccagaggcgtagcaggcgatccaattatgcgact
tttgcaaggcccagcttgcttcgtttagacccagaatatatagaagcaaagagaagagaa
gaagaaaaattaatcaacgatctgtcaagcatgtccacgcatgaaagagtgaaagcaatc
cagaagattcccaaatcaatgaaagaaaaacgtgagattaggaaccgtgttctaacggaa
agaaaaaagaaatcctacaaccaggatgctcaacttaatagttgtacccagtgcttctac
aacacagctttgttcttccggcagttaaagaacagtttcgtcgactgccttcagctcttc
cagttttggcagaaggcactcaaagacattggcagccaatttgggaccagcatccattcc
tactttgtgttcctgacatggcttctcatgttcaacattttctcattcctgatcaacttc
agttttcttgcaattcctcaactcattgcagcccaaccgaatcacctttccttcacgagt
ctggaatttttaaccggagctggttactttacaaacacggtgctctacagcggcttttat
accaacggtacaatagcaaacattgagaatgcctcgccgtattacatgcagctggcttac
attttcacaattgggatttattttatcatctgctttttgagcttgatctacagcatggcg
aaatccttccgtaaccacatcgttatgcctcagatgcactcgggaaacgctgccaagctt
ctttgcatctgggacttcaatgtggtggatgagaaagctgtgcagatgaatcagaaaaat
atcagcacgcagatcaaggagaccctttctgaaatgcatattgaatctctgaagctttcc
ccgaagcaaaggattcttcgcctctcgattcatctggccatgtggtttctctcgttgggc
ttcgcggtggcttcgtgtgctggcatttacttcttttcccttgtcaatttagagtttttt
ctgaatgagaaaaacacacagctggaaaacgaagctgccacgctgatcttgcctatcgtg
gtgagcctccttaaccatgtgatgccgttcctgtactccttctccagattggttgaaaag
ttcacctatcccaggcaccagatctacactgctattatcaggaacgtcatcctgaaaata
tcgatcattggaatcctctgctattactggctcaacatagtagcgctatccaaagtggag
tgctgggaaaccttcattggccaagatatataccggctgcttatagcagactttgtctgc
tgcctcctcggttcattctttggtgaatttctactaagaattattggcacgaaatgctgg
aaaaaacttggagtgccagaatttgatattgctcgaaacgttttggatttgatctacgct
cagactttgacatggattggaatcttcttcgcccctctgcttcctgccatccagatgata
acgtttttcataataatttgtgtgaaaaagatcagcctgttgcagaactgccagcctcca
cgcaaagcttggcgagggtcccagatgaacacaatttttgtcttcctgctctttttccca
tctttcacgggagtcctctcagtcgtggctgtcaccgtctggagacggaagccttcagaa
gtatgtggccctttccgaggtctaacagctccctttgaagctatctctggctggatctca
gacttgacttcttccccgagctcaggatgggtagtgtggatctatcacaacttaattgag
agcacccatttcttcttcatcctttcaatcattgtgctgatgttcatatactttttcttg
caaatcatcaagggacgaaaaacaatggttaaactgctacaagagcaaattgctaacgca
ggcaaggacaaaatgtttctactgaataaattacgggcacttcaagcttctaagttgcca
tctttgagaaggcagcaggagagggacttgtctctgaaccagctgcctaaggagcaaaac
tctgttttgctgcccagctgcgtggagccctttttatggaccgaagataatgagtctttt
actgagtctgtcagacaccctgcaatggccacctttaatcctgaggctggcgaaataacc
cggaatgctggagtatctgatgctctggttttggctttgagagccagacaagaggctgaa
tgggaaatggaagatgaagaaagcttgaagtggaagtaa
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