Pituophis catenifer annectens (San Diego gophersnake): 139325310
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Entry
139325310 CDS
T11059
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04010
MAPK signaling pathway
pcae04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139325310 (CACNA1H)
04020 Calcium signaling pathway
139325310 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139325310 (CACNA1H)
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139325310 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
139325310
NCBI-ProteinID:
XP_070811222
LinkDB
All DBs
Position
Unknown
AA seq
2420 aa
AA seq
DB search
MTDGERRASFQPPSRDEVRVPIASGQGPSQVPHSEEEKDDDTFSACKSIQDSLASAGSST
RDPAHEGDNEVPYPALAPTVFFCFSQSTRPRSWCLKLVCNPWFEHVSMLVILLNCVTLGM
FQPCQDIRCQTERCTILEAFDHFIFAFFAVEMVIKMIALGIFGHKCYLGDTWNRLDFFIV
IAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFLDSHVQRTHNLTFLHKYYRPEEGEENPFICSSLRDNGM
QKCSSIPNRKEYKVDCTLTMDAYNPQLDSLDLSSHNACINWNQYYNVCRTGDLNPHNGAI
NFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIA
TQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLY
NNWQSKRRKKVNPNSGGDDVQGHQSGKRRITSIHHLIHHHHHHHHHYHISNGSPQGPRAN
PGICDLELDVIKPGSQLMLPPSSPSRPSGGAADTESIRSIYHADCHVEGTSVKCKSSSIA
AGSKTANRGSMNYPTILPSPANKASVPPLSKGKKNEGSEAASPVPVVSSPAHLNADCYGK
LHHLVGERGLCRTSSILSGLNVPCPLPGPQANTLSCELQNCPFCASILEDPEFEFSEADS
YESGEDNNGIYEFTQDVKHGDLRDQIQQQRNKKKKKRKPAKERNKITKLWKAFGSKLKRI
VESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGI
WGYIKNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLM
KTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGLRTETGDTMPDRKNFDSLLWAIVTVFQ
ILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDT
DEDKTSTNFEEELEKLKELHASEMKMYSLAVTPNGHLEGKGSMPPPIIMHTAATPMPTPK
GSPHMDSAYPFGDSRRGSNVSMDPLSFDQKSLSSLRSSPCANWGSRRSSWNSLGRAPSLK
KKTQCSERESLLSGEGKGSTDDEAEETKLSTLSRPPLHHRAEALDCRGGLDLPELLQVPG
VHPPIAMLPLEYQDCNGKMLQVPSELYLHLDGRKEDPFDYDDNMEDSFCYRIRKNLEPYK
PKWCKNHEDWSLYLFSPQNRLRANCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPNS
TERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGEHTYLQSSWNVLDGILVFVSIIDIIVS
MASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFI
IFGILGVQLFKGKFYYCEGIDIRNISTKTDCRKAHYKWVRRKYNFDNLGQALMSLFVLSS
KDGWVNIMYDGLDAVGIDQQPSRNHNLWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCR
QHQEAEEARRREEKRLRRLEKKRRSKAIYMSEAQRRPYYADYSPTRKYIHSLCTSHYLDL
FITFIIGVNVITMSMEHFDQPKSLEEALKYCNYLFTFVFVVEAILKLVAFGFRRFFKDRW
NQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDT
VVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFNNFGMAFLTL
FRVSTGDNWNGIMKDTLRECHRDDKHCLTYLPVISPVYFVTFVLIAQFVLVNVVVAVLMK
HLEESNKEAKEDAEMDAEIELEMSRGINTPERTMDGRQTPSKGGSPLLVKHQVMGASAAA
GGGLRDPQNLLTLRKISVARMHSLPNDSYMFRPVMPAKPPFPLHEGELEAFSYKSPRGSV
TSIHSQPVVTSSLRIPQSAFRPTTPPPSHNMGAPWKLLPPRPAPRTPSRLLCRQEAIQKE
SSDSSAVESKQCAQAEMCENPPLKKLSHSILGAPQPPPAPTSLPGSPPLPLPQPSPSHPS
SIHTPRDTFSQHNISNRRSAHSSILDSSLFESSDLADEEVSHINSSARGWGAQLENRDCS
DSPFASPAPSPVPFRNCSTTSLTMGKGKEKDLKKFYSVDTRGFLAKPTWADDQRRHSIEI
CPSVGNGDRGFADASERRRLPLQIQSESEYLHGIRRKKKMSPPCISIDPPMEEESSAATT
RNKASENSLLRRRTPSCESTAYRDSLELAESQPGELACKADRWAPPACRGEHLTIPSFSY
EPTDPGSMGEACERRQTVGPSVDSSPEGPKLQQTDPLETHGNPSETTQEELRGGRNCPLP
QHGPVPGTPTNTEEVVDEPV
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggagagcatccttccagccaccgtccagggatgaagtgcgggtc
cccatagcgtctggccaaggccccagccaagtcccccattctgaagaggagaaagatgac
gataccttcagcgcttgcaagtccatccaggacagcttggcctcggcaggttcgtccacc
cgggatccagcccatgagggagacaacgaggtcccctaccccgccctggcccccaccgtc
ttcttctgcttcagccagtccacgcgaccacgcagctggtgcctcaaactggtctgtaat
ccctggttcgagcacgtcagcatgctggttatcctcttgaactgcgtcaccctcgggatg
ttccagccgtgtcaggatatcaggtgccaaacggaaaggtgcacaatcttggaggcattt
gatcacttcatcttcgccttctttgctgtggagatggtcatcaagatgatcgccctgggg
atctttggccacaaatgttatctaggagacacctggaaccgcctcgacttcttcattgtc
attgctggcatgatggaatattctctggatggacataatgtcagcctttcagccatccgg
acagtgcgggttctcaggcccttacgagccattaacagggtgccaagtatgcgcattctt
gtcaccctgctcctagacactctgcctatgttaggcaatgttctcctcttgtgtttcttt
gtctttttcatctttggcatcgtgggtgtccagctctgggccgggctgctgaggaacagg
tgtttcctggattcccacgttcaaaggacacacaacctgactttcctgcataagtactac
cggccagaagagggggaggagaacccgttcatctgttcctccctccgggataacggcatg
cagaagtgctccagcatcccaaaccggaaggagtacaaggtggactgtacattaaccatg
gacgcttacaatccgcaattggactcgctggacctgagcagccacaacgcctgcataaac
tggaaccagtattataatgtttgcaggacgggggacttaaacccgcacaatggagctatt
aattttgataatattggctatgcttggatagctatttttcaggttataaccctggaagga
tgggttgacatcatgtattatgttatggacgcacactctttttacaattttatatatttt
atactacttataatagttggttctttcttcatgattaacttgtgcctggttgtgatagca
acacagttttctgaaaccaaacagcgggagaaccagctgatgcaagagcagcgagcccgc
tacctctccaacgacagcacaatcgccagcttctccgagccgggaagctgctacgaagag
ctcctcaaatacatctgccacattttcaggaaagtcaaacggaggaccctgcgcctctac
aacaactggcagagcaagcggcggaaaaaagtcaaccccaacagtggcggagacgatgtt
cagggccaccagagtggcaagcggcgcatcacgtctatccatcacttgatccaccaccac
caccaccaccaccaccactaccatatcagcaacgggagcccccaagggccaagggccaac
ccagggatttgtgacctggagttggacgtcataaagcctggaagccaactgatgcttcct
ccatcttcacccagccgcccaagtggtggagctgcagatacagagtccatccgcagtatc
taccatgcagactgccatgtggaagggacctcagtgaaatgcaagtcttccagcattgct
gcaggtagcaaaactgccaatcgtggcagcatgaactaccccaccatcttgccttctcca
gcaaacaaagccagtgtccctcccttgtccaaggggaagaaaaatgagggcagtgaggcg
gcctctcccgtgcccgtggtcagcagcccagcccatctgaatgcagattgctatgggaag
ctccatcatctagtgggagaacgtggcctctgccggacctccagcattctgtctggcttg
aacgtgccgtgtcctctgccagggccccaagccaacaccttgagctgtgagctgcaaaac
tgcccattctgtgccagcatcctggaggatcctgagtttgagttcagtgaggcagacagc
tatgagtcaggagaagacaacaatgggatctatgagttcacccaggatgtaaaacatggg
gacttacgggaccagatccagcagcagaggaacaagaaaaagaagaaaaggaaaccagcc
aaggagaggaacaagataaccaagctctggaaggcctttggcagcaagctgaaacggatc
gtggagagcaagtatttcaaccgtgggatcatgatcgccatcctcatcaatacgctgagc
atgggcattgagtatcatgaacagccggatgagctaaccaatgccctggagatcagcaac
attgtcttcacaagcatgtttgctctggagatgctcctcaagctcttggcttttggcatc
tggggttacatcaagaacccctacaacatttttgacggcatcattgttgtcatcagtgtc
tgggagatcattggccaggccgacgggggcctttcggtgctgaggaccttccgtctcctc
cgggttctcaagctggtgcggttcatgccagctctccgccgacagttggtggttctcatg
aagaccatggacaacgtggccaccttctgcatgctgctcatgcttttcatcttcatcttc
agcatcctaggtatgcatctttttgggtgcaaatttggcttaaggacagagacaggagac
accatgccagaccgaaagaactttgattccctgctgtgggcaattgtcaccgtgtttcag
atcctgacccaggaagactggaatgtggtcctctacaatggaatggcctccacctcctcc
tgggctgctctctactttgtggctctgatgacctttggcaattatgtcctcttcaacctc
ttggttgccatcctggtagaaggtttccaagccgagggtgatgccaacagatctgacaca
gatgaagacaaaacatcgaccaactttgaggaagagcttgagaagctgaaggaactccat
gcttctgagatgaagatgtattcattggctgtcacacccaatggccacctggagggcaag
ggcagcatgcccccgcccatcatcatgcacacagcagccacccccatgcccaccccaaag
gggtctccacacatggactcggcctacccttttggggactccagaaggggcagcaacgtc
tcaatggacccgctcagctttgaccagaaatctttgtccagcctccgcagctccccctgt
gccaactggggcagccgccgctcgagctggaacagtctgggccgggcccccagcctcaag
aagaagacccagtgcagcgagcgagagtccttgctctcgggggagggcaaaggcagcacg
gatgatgaagccgaggagaccaagctcagcactctcagtcggcccccactgcaccaccgg
gcagaggctctggactgccggggcggcttggatctgccagaactcctccaggtgcccggg
gtgcaccctccgatagccatgctgcccctcgagtaccaggactgcaacgggaagatgctg
caggtgcctagcgagctttacctgcacctggatggccgcaaagaggatcccttcgactac
gatgacaacatggaagacagtttctgctatagaatccgcaagaacctggagccctacaag
cccaaatggtgcaagaatcatgaggactggtccctctatttgttttcccctcaaaatcgc
ctccgggccaactgccagaaagtcatcgcacacaagatgtttgatcacgtggttctggtt
ttcatcttcctcaactgcatcaccatcgccttggagcgcccggatatcgatcccaacagc
acggaacggatattcttgagtgtctccaactacatctttacggccatttttgttgctgag
atgatggttaaggtggtggctcttggcttcttctctggggagcacacctacctccagagc
agctggaacgtcctggatggaatcctggtctttgtgtccatcattgacatcatcgtttcc
atggcatcagcaggcggagccaagattttagggatcctgagagtacttcggctgctgcgc
accctgagacccttacgggtcatcagcagagctccaggtctgaaactcgtggtcgagacg
ctgatctcttctctccggcctatcggcaacattgtcctgatctgttgtgctttctttatc
atctttggcattttgggggtgcagctcttcaagggcaagttctactactgtgaggggatt
gacatccgaaacatctccactaaaaccgactgcagaaaagcccactacaaatgggtccgg
cggaagtataacttcgacaatttggggcaggccctgatgtccttgttcgtcctctcttcc
aaagatggatgggtgaacatcatgtatgacggattggatgccgtggggattgaccaacag
cccagccggaaccataacctctggatgcttctctacttcatttccttcctcctcatcgtc
agcttctttgtgctcaacatgttcgtcggggtggtggtggagaacttccacaagtgtcgg
cagcaccaggaggctgaggaggcccggcggcgtgaggagaaacggctgcggcgtctggag
aaaaagcgcaggagtaaggcgatatacatgtctgaagctcaacgacgcccatactacgcc
gattattcacctacccggaaatacatccattcgctctgcaccagccattatctggacctt
ttcatcacttttatcattggtgtcaatgtcatcacaatgtccatggagcacttcgatcaa
cccaagtctctagaagaggccctgaaatattgtaactacttgttcaccttcgtctttgtg
gtcgaagccatcttgaaactggtggcctttggcttccggaggttcttcaaggacaggtgg
aaccagctggatctggccatcgtcctgctgtccatcatggggatcactctcgaggagatt
gaaatgaatgccgcactccccatcaaccccaccattatccgcatcatgagagtgctcaga
attgctagagtgctgaagctgctgaaaatggccacagggatgcgggccttgctggacacg
gtggttcaagccctcccacaggtggggaacctcggcctgctatttatgctcctttttttc
atctacgctgccctgggggtagaattatttgggaaattagactgcagcgaggaaaaccct
tgcgaaggcctaagtcggcatgctaccttcaacaactttggaatggccttcctcaccctc
tttagggtatcaactggggacaactggaatgggatcatgaaggacactctccgggaatgc
caccgggatgacaagcactgtctcacctatctgcctgtcatctcccctgtttacttcgtc
accttcgtcctcatcgcccagttcgtcctggtcaatgtggtagtggccgtcctaatgaag
cacttggaggaaagcaacaaggaggcgaaggaagatgctgagatggatgccgaaatcgag
ctggagatgtccagagggatcaacacaccagaaaggaccatggatgggagacagacccct
tccaaggggggttcacccctgctggtgaagcatcaagtcatgggagcttctgctgctgct
ggaggtggtcttagggacccccagaaccttctgactcttcgcaagatctcggtggcaagg
atgcattcgctgcccaatgacagctacatgtttcgtcctgtgatgcccgccaagcctccc
ttcccactccatgaaggggagctagaagccttctcctacaagtcacctcgaggatctgtc
acatccatccattctcagccggtggtcacttcatcattgaggatcccacagtcggccttc
cgcccaacaacacctcctcccagccacaacatgggagctccatggaagcttctaccccct
cgccctgcccctcgcacccccagcagactgctgtgcagacaggaagccatccagaaggag
tcctcggatagctcagcagtggagtcaaagcagtgcgcccaggcagagatgtgtgaaaac
ccacccctgaaaaagttgtctcacagtattttgggggcccctcagcctcccccagccccc
acatccctcccaggcagtcctccccttccccttccccagccctccccttcccacccttca
agcatccacacccccagggacaccttcagccagcacaacatctcaaacaggaggtccgcc
cacagcagcatcctggacagctccctcttcgagtcctccgacttggcggatgaagaggtc
agccacatcaacagctccgccaggggctggggggcgcagctggagaaccgggactgctcg
gactccccttttgcctccccggcgccatctcctgtccccttcaggaactgcagcacaacc
agcttgaccatggggaagggcaaggagaaggacctgaagaagttctacagcgtggacacc
cgggggttcctggccaagccgacgtgggcggatgaccagcgacggcactccatcgagatc
tgcccttcagtcggcaacggggatcgcggcttcgcagatgcctctgaaaggagaaggctg
cctctccagatccagtcggagtccgagtatctgcacggcatccggaggaagaagaaaatg
agccctccctgcatctctattgaccctcccatggaggaagaaagcagcgccgccacgacg
cgcaacaaagcctctgagaacagcctgctgagacggagaacgccctcctgcgaatccacg
gcctacagggactccttggagctggccgagagtcagcctggagaactggcctgcaaggca
gaccgctgggcacccccagcctgccgaggggagcatttaaccatcccaagcttctcctac
gagccgacagaccccggttccatgggtgaagcctgcgaacgccgccaaactgtgggcccc
tctgtggattcctcaccggagggtccgaagctgcagcaaacagaccccttggagactcac
ggcaacccctctgagacaacccaagaagaactccgagggggcaggaattgtcccctcccg
cagcatggaccggttccagggaccccaaccaacacagaagaggttgtggacgagccggta
tag
DBGET
integrated database retrieval system
