Pituophis catenifer annectens (San Diego gophersnake): 139325341
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Entry
139325341 CDS
T11059
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae00260
Glycine, serine and threonine metabolism
pcae00630
Glyoxylate and dicarboxylate metabolism
pcae00670
One carbon pool by folate
pcae01100
Metabolic pathways
pcae01200
Carbon metabolism
pcae01230
Biosynthesis of amino acids
pcae01240
Biosynthesis of cofactors
pcae04981
Folate transport and metabolism
Module
pcae_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
139325341 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
139325341 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139325341 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
139325341 (SHMT1)
Enzymes [BR:
pcae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
139325341 (SHMT1)
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Ortholog
Paralog
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
139325341
NCBI-ProteinID:
XP_070811267
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All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MASTHAGGDQVTRDLWVSHNKMVMEALDTNDPEVYDIIKKEKRRQRVGLELIASENFASR
AVLEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQKRALEAYGLDPQKWGVNVQPYS
GSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETG
YIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADENNAYLMADMAHISGLVAAG
VVPSPFQHCDVVSTTTHKTLRGCRAGMIFYRKGERCSKQVTDAPSSWAEASGEDGEASGI
FQTPFFLSPGVRSVDPKTGKEVLYNLESLINQAVFPGLQGGPHNHAIAGIAVALKQAMTP
EFKTYQQQVVANCKALSAALTSLGYHIVTGGSDNHLILVDLRNRGTDGGRAERVLELCSI
ACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFKKVAHFIHKGIELTLQVQSDMSPK
ATLKEFKEKLVTEQKYRGLLRSIEQEVETFADSFPLPGLPVL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacacacgccggcggagaccaggtcaccagggacctctgggtctctcacaac
aagatggtgatggaagccctggacaccaatgaccccgaggtctacgatattatcaagaaa
gagaaacggcgccagagagtcgggttggagctgatcgcgtcagaaaactttgccagccga
gccgttctggaggccttgggttcctgcctgaacaacaaatactcagaaggatatccgggg
caaagatattatggtgggacagaatttgtggacgagttggaaagactttgccagaagaga
gccctggaggcctatgggctagacccacagaagtggggggtgaacgtccagccctattca
gggtcccccgcaaacttcgccgtgtacaccgccctggttgagccccatgggaggattatg
ggcttggacctgccggatgggggtcatctcacccacggcttcatgaccgacaagaagaaa
atctccgccacgtccatcttctttgagtccatgccctacaaggtcaaccccgaaacgggc
tacattgactatgaccgactggaggagaatgcccgcctttttcatccaaagctgatcatt
gcaggggtcagctgctactcccggaatttggactacgcccggatgaggaagatcgcagat
gagaacaacgcctacctcatggccgatatggcccacatcagcggcttggtggccgccggc
gtggtgccctcccccttccagcactgtgacgtggtttccaccaccacccacaaaaccttg
cggggctgccgggctggcatgatcttctaccggaaaggtgagcgttgcagcaagcaggtc
actgatgctccatcttcctgggctgaagcctctggagaagatggggaggcatccggcatc
ttccagacgcccttcttcctttctccaggcgtccgcagcgtggaccccaaaacggggaag
gaagtcctgtacaacctggaaagtctcatcaatcaggcagtcttccctggtctccaggga
ggccctcacaatcacgccatcgcaggcattgccgtggctttgaaacaagccatgactccc
gaattcaagacgtaccaacaacaagtggtggccaactgcaaggctttgtcagccgcgctc
accagcttgggataccacatcgtcaccgggggctccgacaaccacttgattcttgtcgat
ctgcgcaaccggggcacggatggggggcgagctgaacgggtcctggagctctgctccatc
gcctgcaacaagaacacctgtccaggagacaaaagtgctttgcgccccagtgggctgaga
ttggggaccccggctctcacctccagaggactcctggaagaagacttcaaaaaagtagct
cacttcattcacaaaggtatagagctcaccttgcaggtccagagcgacatgagccccaaa
gccaccctgaaagagttcaaggagaagttggtgacggagcagaagtatcgagggctgctg
aggtccatcgagcaggaagtggagaccttcgccgattccttcccgcttcccggcttgcct
gtgttgtaa
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