Pituophis catenifer annectens (San Diego gophersnake): 139325377
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Entry
139325377 CDS
T11059
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04020
Calcium signaling pathway
pcae04080
Neuroactive ligand-receptor interaction
pcae04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139325377 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139325377 (GRIN2A)
04082 Neuroactive ligand signaling
139325377 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139325377 (GRIN2A)
Ion channels [BR:
pcae04040
]
Ligand-gated channels
Glutamate (ionotropic)
139325377 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
139325377
NCBI-ProteinID:
XP_070811316
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MVLVKMACVCWNLLVLHAFLADLALVHGAERSSPILNVAVILGRTPSVTERDVRALSSRD
VAGGLPTDVNVVPLLINQTDPKSIITHICDLISGTKIHGVVFGDDSGQEAVAQILDFISS
QTLIPILGIHGGSSMIMAEKDEMSTFFQFGASIQQEAIIMLKFMQYYDWHIFSVVTSIFP
GYRDFISFVKYTVENSFVGWDMQNVVTLDAAIGDAKSTIQLKKIHSSVILLYCSTDEATY
ILEEARSLGLTGYDFFWIVPSLVRGDIEIPPDNFPAGLISVAYDGWDYSLDARIRDGLGI
ITTAAATMLEKYSFLPEAKTSCYGQSEYNERPSHMLHKFMMNVTWKGRDLSFTTDGYQAQ
PRLVVTVLNESRAWEKVGEWENQTLTHKYSVWPRFNSFNDSDPDHNHLSIVTLEEAPFVI
VEDMDPLTETCVKNTVPCRKFVVINNITKEGKNLKKCCKGFCIDILKKLSRTIKFTYDLY
LVINGKHGKKINNEWNGMIGEVVKKQAVMAVGSLTINGERSEVVDFSVPFVETGISVMVS
RSNGTVSPSAFLEPFSASVWVMMFVMLLVVSAIAVFIFEYFSPVGYNRNLAQGKDAHGPS
FTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEF
VDQVTGLSDKKFQQPYAYSPPFRFGTVPNGSTERNIRNNYKEMHAYMVKYNQKGVEDALV
SLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRAIDLA
LLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWE
HLFYWKLRFCFTGMCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPHFTLTSSQTNMLKLL
QTAKNMTNVNPGRINSPQRAAEFIRRGSLMMDLMMEKGSFIFSDSNRPLTPKENIFSDNT
NELQTFPANRHPDNLNNYVFQGPHPLTLHESNPNTVEVAMAAEGKESSRPRQLWKKSLES
LRQDSLRQSHGSQRDDGTGESRRHSLKGPRYLPEDVHSDVSDSSSRAAGHAEGESNSKPP
KTKDNAKKRPASKYPKDCSEVELTYLKSKQSLPRDKIYIIDADKQHSFHLDVSPEYVENI
ILPESADFSSLYQDRNDSCRAPEQSNQIPLTNEESLPSNGQYKLYPKHYSTKDKNVAYGE
ANERYRQKATHCRSCLTSLPSYAGHYLSRSPYRCAACVRMGSLYDIEEGQMLQSPANSGP
REELCQQDWAQAEKSQPPRKSKLQISRQRSFDNLFSKHRDGNGGRTARSISLKEKERLLE
GGPYATLFRAPQSKHSSGKLPLFSRTLDDGKRIKSLYLECSAENPFLRSYCDDQHLVLAP
SPTGLHRQPAYDSVSRSSVKSAASYCSRDGRVHNDAWVSEHGMPYVATQNSLYSAPRGFN
SCSDRRVYKKMPSLESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtcaagatggcatgcgtgtgctggaatctgctggtgctccacgcgtttctg
gcggatctggccctggtccacggggcggagagaagctcccccatcctgaacgtcgcggtc
attttggggaggaccccgagcgtcacggaaagagacgtccgtgctctcagcagccgggat
gtggcaggggggctccccactgacgttaacgtggtgcccctcctgatcaaccagaccgac
cccaagagcatcatcacccacatctgcgacttgatctcgggcaccaagatccacggggtg
gttttcggagacgacagcggccaggaggccgtggcccagatcctggattttatctcctcc
cagactctgatccccatcctgggcatccacggaggctcctccatgatcatggcagagaag
gatgagatgtcgacctttttccagtttggggcgtccatccaacaggaggccatcatcatg
ctgaagttcatgcagtactacgactggcacatattctccgtggtgaccagcattttccct
ggctaccgggacttcattagcttcgtcaagtacaccgtggagaacagttttgtgggctgg
gacatgcaaaacgtggtgaccctcgacgcggccatcggagatgccaagtccacaattcag
ctgaagaagatccactcttcggtcatcctgctctattgctccacggacgaggccacctac
atcttggaggaagcccggtccttgggcttgacaggctatgactttttctggattgtcccc
agcttggtccgtggggacatagaaatcccacctgacaatttcccagcagggctgatttca
gtggcctatgacgggtgggactacagtttggatgctcggatccgggacggccttgggatt
attacaacggccgctgcaaccatgctggagaaatattccttcctccccgaggccaagacc
agttgctacgggcagtcggagtacaacgaacggccctctcacatgcttcacaagtttatg
atgaacgtgacttggaaaggcagagacttatccttcaccacagatggctaccaagcccag
ccgcggctcgtggtcaccgtcctaaacgagagccgggcctgggagaaggtgggcgaatgg
gagaaccagacgctgacccataaatactcggtctggccccggttcaactctttcaacgac
agcgacccggaccacaaccacctcagcatcgtcaccctggaggaggcgcccttcgtcatc
gtggaggacatggaccccttgacggagacctgtgtgaagaacacggtgccctgccggaaa
tttgtcgtcatcaacaacatcaccaaagaagggaagaacctgaagaaatgttgcaaaggg
ttttgcatcgacatcctgaagaagctctcaaggaccatcaagttcacctacgacctctac
ctggtgatcaacgggaagcatgggaagaagatcaacaacgagtggaatggaatgattggg
gaggtggtcaagaagcaagccgtgatggctgttgggtccctcaccatcaatggggagcgc
tcggaggtggtcgatttttcggtgccctttgtggaaactgggattagcgtcatggtctcg
cggagcaatggcacagtttctccatctgcttttttagagcccttcagcgcctctgtctgg
gtgatgatgtttgtcatgctgctggtcgtgtcggccatcgccgtctttatcttcgagtac
ttcagcccggtgggctacaaccgcaacctggcccaggggaaagacgctcacgggccctcc
ttcaccatcgggaaggccgtgtggctcctttggggcctggtgttcaacaactccgtgccg
gtgcagaacccgaaaggcaccaccagcaaaatcatggtctcggtctgggccttcttcgcc
gtcatcttcttggccagctacacagccaacctggctgccttcatgatccaggaggagttt
gtggaccaagtcacggggctgagcgataagaagttccagcagccctacgcctactcccct
cctttccggttcgggacggtccccaatggcagcaccgagaggaacatccgcaacaactac
aaggagatgcacgcgtacatggtgaagtacaaccagaagggagtggaggacgccttggtc
agcttgaaaaccgggaagctggacgctttcatctacgacgcggcagtgctgaactacaag
gccgggcgggacgaaggctgcaagctggtgaccattggcagcggctacatctttgccacc
acgggctacggcatcgctctacagaaggggtcaccctggaagagggccatcgacctggcg
ctgctgcagtttgtgggagacggggaaatggaagagctggaaaccctctggctgactggt
atttgccacaatgagaagaacgaggtcatgagcagccagctggacatcgacaacatggcg
ggcgtgttttacatgctggccgccgccatggcgctcagcctgatcaccttcgtgtgggag
catctgttttactggaaactccgcttctgcttcactgggatgtgctccgaccggccaggg
ctgctgttttccatcagccggggtatctacagttgcatccatggggtccacattgaggag
aagaaaaagtctccccacttcaccctgaccagttctcagaccaacatgttgaagctcctg
cagacggccaagaatatgaccaacgtgaaccccgggcggatcaattccccgcaaagagca
gctgaattcatccgccgtggatcgttgatgatggacctgatgatggagaagggcagtttc
atcttctcggacagcaaccgccctctgacccccaaggagaacatcttcagcgacaacacg
aacgagctgcagaccttccctgccaaccgccacccggataatctcaacaactacgtcttc
caagggccgcacccgctcacgctgcacgagtccaacccgaacacggtggaggtggccatg
gcggccgagggcaaggagagctcccgcccgaggcagctatggaagaaatcgctggaatct
ctgcgccaagactccctccggcagagtcacggttctcagagggacgatggcacgggggaa
agccggcggcactccctgaaaggtcccaggtacctgcctgaagacgtccactcagacgtc
tccgactcctccagcagagccgctggccacgcagagggggagagcaacagcaagcccccc
aagaccaaggacaacgcgaagaagaggcctgcatcgaagtatcccaaggattgcagcgag
gtggagctgacctacctgaagagcaagcagtccttaccccgggacaaaatctacatcatt
gatgcagacaaacagcacagtttccaccttgatgtttccccagagtatgtggagaacatt
atccttcctgagtcggctgacttttccagtctttatcaggatcgcaacgacagctgccgg
gcccccgagcagagcaaccagatccccttgaccaacgaggaaagtcttccaagtaacggc
cagtacaagctctacccaaagcactacagcacgaaagacaaaaacgtggcctacggcgaa
gcaaacgagcgataccggcagaaggccacgcactgccggagttgcctgaccagcctgccc
agttacgcggggcactacttgagccgctcaccctaccggtgcgccgcctgcgtgcggatg
ggcagcctctatgacatcgaggagggccagatgctgcagagccctgccaactccgggccc
cgggaagaactgtgccagcaggactgggcccaggcggagaagagccagccgccccggaag
agcaagctgcaaatcagcaggcagcgttcgttcgacaacctcttcagtaagcatcgggac
ggcaatgggggcagaacggcccgcagcatcagtctgaaagagaaggagaggcttctggaa
gggggcccctacgccaccctcttcagggctccccaaagcaaacactcgagcggcaagctc
ccgctcttctcacgcacgttggacgacggtaagaggatcaagtcgctgtacctggagtgc
tcggcagagaacccttttctgcgttcttactgtgacgaccagcacttggtcctggcgccg
agtcccaccggcctgcacagacagccggcctatgacagcgtctccaggtcgtcggtcaaa
tcggcagcctcgtactgttccagagatggccgggtccacaacgacgcgtgggtttcggag
cacgggatgccttacgtggccactcagaacagcctgtactctgctccacgagggttcaac
tcctgcagcgacagacgggtctataagaagatgcccagcctggagtcggacgtgtag
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