Pituophis catenifer annectens (San Diego gophersnake): 139325394
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Entry
139325394 CDS
T11059
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcae03037
]
139325394 (IFT140)
Cilium and associated proteins [BR:
pcae03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
139325394 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_Prp19
Beta-prop_EML
TPR_IFT80_172
TPR_GEMI5
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_WDR35_TULP_N
RNase_HII
WD40_MABP1-WDR62_1st
Clathrin
Motif
Other DBs
NCBI-GeneID:
139325394
NCBI-ProteinID:
XP_070811339
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MAVYIDHRIEALESCGPHTHITWHRLQPLLAVASINANSGGSVDIFQEQGEYVGDAHLEK
NFRVTYLSWHPSKLIVAVGCEMGDVVVVNKQDKEHHAVPSNHNADISVLNWSTNGTRLVS
GDKLGVLVLWRMDQRGRVQGPPLLKHEYGKHLTFCIFRPPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSGMGMALKMGPQEGLSFFVSVIDGTVHYVSERGKTNQALVIETSIQKMLFME
RDVLVVITETLLLSLHKISPEGEAEELLKVKLSGKMNHPADITLIDHSLLITATNEPLLR
FWDLERGENYVLSLDEQLGFETGECVHCVSYCNAKGLLAAGTNKGRIAMWRKVPFISQTT
WSLEGKDRWKLQTPTELDGNIIQIEWSSKKNLLAVNLNNSVAILREQAMASHFHQQMAVV
QVSPNLFNITSFSSKMMDNLRIDTHVNGVCTTKDAVAFWNGKQVSIYELSAATLRNSGSF
LCDSPVLAMHEENLYTVEPNRVQVRTWQGTVKQLLSFPESEGNPCFLDVCGNYLTVGTDL
SHFKIFDLSRREAKVHCNSKALADLMPGTLGIASVKCNTSGNRVSILLSKADGSFDPRIC
FYDIEMDTVTLFDFESGRQRDAKEMLSLGQETEGKTTSVYPVLRNRIPTSHFWDQNEPRL
FVCEAVLDPNQQSLDKKQEASENLVDVLVVSFFSTEEHGLLLQDSFQLPSTYQSLLGMEV
PHYYFAKKPEAEKKDEVEPGGVPLHQMVARRPMRDFIGLEECDKMTCEAMLNFSFYLTIG
DMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVARVCLGNMGHARGAKALREAEREPEQE
AKVAMLAIQLGMLEDAEQLYKQCQRYDLLNKFYQASDQWQKAIEIAETQDRVHLRTTYYN
YAKHLEAIAERNFAITYYEKSDTHKFEVPRMLSEDLQALESYVNRMKDKGLWKWWAQYLE
GQADLEAAFKYYELAQDYFSMVRIHCFLGNIQKAAEIANATGNWAASYHVARQYESREDI
KQAVHFYTRAQAFNNAIRLCKENQLDDQLMNLALLSSPEDMIEAARYYEGRGEQMDQAVT
LYHKAGHLSKALELAFATEQFAALQLVAEDLDEKSDPTLLARCSNFFIEHSQYEKAVKLL
LAAKKYQDALQLCLLQNLTITEEMAEKMTISKDSKELSEDSRRELLEQIADCCMRQGNYH
MATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQREIYIMAANYLQTLDCRKDPEIM
KNIISFYTKGRALDLLAGFYDACAQVEVDEFQNYEKALGALTEAYKCMSKAKTRSPVEQE
NKLAHLQSKMTLVKRFIQARRLYSEDPKEAIRQCELLLGEPDLDTTIRLGDVLGFLVDHH
LQMQEFQMAYRYLEEMRKKIPCVNLNYYVNQQTVEAVHRGLGIPLGRNTASERVRHNSVE
DKEIEEVADEAEPS
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatacattgatcatcgaatagaagctcttgagtcctgtggaccccacacccac
ataacgtggcaccgtcttcagccacttttagctgttgcatccattaatgcaaactctggt
ggcagtgtggatattttccaagaacagggagagtatgtgggtgatgcacacttggaaaaa
aactttcgggtcacgtatctcagttggcacccttccaaattgattgtggccgtgggttgt
gagatgggagatgtggtagtagtgaataaacaagacaaggagcatcatgctgtgccctcc
aatcataatgctgatatttcagtcctgaattggagtactaacgggacacgccttgtttct
ggagataaactcggggttcttgtattgtggcggatggatcagcggggtagagtccaaggc
ccccctttgttaaaacatgagtatggaaaacatcttactttctgcatttttcgcccacct
cctcccggagaagatttggtccagctggccaaagctgctgtgagcggtgatgagaaggcc
ctggatatgtttaactggagaaaatctggaatggggatggctctgaaaatgggaccccag
gaaggcctgtccttctttgtaagcgtgatcgatggaactgtgcattatgtgagcgaaaga
ggaaagaccaaccaagcgctggtgatagaaacttccatccaaaaaatgctgttcatggaa
agagacgtcttagtagtaataacggagactctcctcttgtcccttcacaaaatttctccc
gaaggagaagcagaagaacttctgaaggtgaagttgagtggaaaaatgaatcatcctgct
gatatcactttgattgatcatagcctccttatcacagcaacaaacgaaccccttcttagg
ttctgggacttggaacggggtgagaattacgtcctttctctggatgaacagctaggcttc
gaaaccggagaatgtgtccattgcgtctcctattgcaatgccaaaggtcttctagccgct
ggcaccaataagggccgaatagctatgtggaggaaagtgccattcattagccaaactacc
tggtccctggaaggcaaggacagatggaaacttcagacccctacagagctggacgggaat
atcattcaaatcgagtggagttccaaaaagaatctgttggctgtaaacctaaacaactcg
gtagccatcctgagagaacaggccatggcttcgcacttccatcaacaaatggccgtggtc
caggtttccccaaacttgttcaacatcaccagcttcagcagcaaaatgatggataacctc
cgtatcgatacgcatgtgaacggagtgtgcacaaccaaggatgctgtagcattctggaat
ggaaagcaagtttctatctatgaactctcagctgccactttacggaattccggttctttc
ctctgtgattccccggtactggctatgcacgaagagaacctttataccgttgaaccaaat
cgggttcaagtccgcacctggcaaggcaccgtgaagcagctgctttccttccctgaatcg
gaaggcaatccctgctttctggacgtctgcgggaattacctgacagtggggaccgacttg
tctcactttaagatctttgatctttctcgcagagaagcgaaagtacattgcaatagcaag
gccttggcagatctcatgcctggcactctcgggattgcatccgtgaagtgcaacacaagc
ggcaacagagtcagcattctcctgagcaaggctgatggcagtttcgatcctaggatttgt
ttctacgacattgaaatggacacggtcaccctgtttgactttgagtcaggacgacagaga
gatgctaaggaaatgctctccttgggacaggagactgaagggaaaaccacctctgtatat
ccagtactgcgtaaccgaatccctacaagtcacttctgggatcagaacgagccaaggctg
ttcgtatgtgaagcagttctggaccctaatcaacagtcattggataagaagcaagaagca
tcagaaaatttggtggacgtgctggtagtatctttcttcagcaccgaagagcatggtctc
ctgctccaagacagttttcaactgccatcaacttaccagtctcttctgggcatggaggtg
ccacactattactttgccaaaaagccggaagctgagaaaaaggatgaggtagaacctggc
ggggtccctctgcatcagatggtggctagaagaccaatgagagatttcattgggctggaa
gaatgtgacaagatgacctgcgaagcgatgctcaacttcagcttctacctgaccattgga
gacatggatgaggccttcaagtccatcaaactcatcaaaagcgaagccgtctgggagaac
atggcccgcatgtgcgtgaagacccaaaggctggatgttgccagagtctgcctggggaac
atgggccatgcgcggggagccaaggcgttgcgggaggctgaacgagaaccagagcaggaa
gccaaggtggccatgttagccatccagttgggcatgctggaagacgctgagcagttatac
aagcagtgccaacgatacgacctcctgaacaagttctaccaggcttcggaccagtggcag
aaagccattgagatagccgagacccaggaccgagtgcacctgcgcacgacgtactacaat
tacgccaagcacctggaagccatcgctgagcgcaactttgccatcacctactatgaaaag
tctgacactcataaatttgaagtgcctcgtatgctttcagaggatttgcaagccttggag
tcttacgtcaacagaatgaaagataaaggtttgtggaaatggtgggctcaatatctagaa
ggccaggccgacttagaagcggctttcaaatattatgagctggctcaggattatttttcc
atggtccgtatccattgcttcctgggtaacatccagaaggctgctgaaatagcaaacgcc
acaggcaattgggcagcttcttaccacgttgcccgtcagtacgagagccgcgaggacatc
aagcaggcggtgcacttctacacccgggctcaagcgtttaataacgccatccgtttgtgt
aaggaaaaccagctggacgaccagttaatgaacctggcacttctcagttccccagaagac
atgatcgaagctgcccgctactatgaaggaagaggagaacagatggaccaagctgtgacg
ctctaccacaaggctggacacttgtccaaggctctggagctggcctttgccaccgagcaa
tttgcagccttgcaactggttgcagaagatttggatgagaagtccgacccgaccctcctg
gctcgctgctccaattttttcatcgagcattctcagtacgagaaggccgttaagctgttg
ctcgctgccaaaaagtaccaggatgccttgcagctttgcctgctgcagaacctgaccatc
accgaagagatggcggagaagatgaccatctcaaaggattccaaggaactttccgaagac
tcccggcgggagctcctggagcagatcgccgactgctgcatgaggcagggcaattaccac
atggccactaagaaatatacccaagcaggaaacaagctgaaggccatgagggctctgctg
aaatctggcgataccgaaaagattgtgttctttgccggcgtctcgagacaaagggagatt
tacatcatggctgccaattacctgcagactctggactgtcgcaaagatccagagatcatg
aagaacatcatcagcttctacaccaaaggaagagctctggatctcttggctgggttttat
gatgcgtgtgctcaggtggaagtggatgaattccagaattacgagaaggccttgggagcc
ctgaccgaggcgtacaagtgtatgtccaaggccaagacccggagcccagtcgagcaagag
aacaagcttgcacacctacaaagcaagatgacactagtgaagagatttattcaagcccgg
aggctttactccgaggaccccaaagaggccatcagacagtgtgaactgctcctgggagaa
cctgatcttgacaccaccatccgcctgggggacgttctgggattcttggtggatcatcat
ttgcagatgcaagaattccagatggcctatcggtacctggaggaaatgcggaagaaaatc
ccctgcgtgaatctcaactactacgtgaaccagcagacggtcgaggcagtgcaccgaggg
ctgggcatccccctcggccgaaacaccgcttcggagagagttcgccacaacagcgtggag
gacaaggagatcgaagaagtggccgatgaggcagagccctcctga
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integrated database retrieval system
