Pituophis catenifer annectens (San Diego gophersnake): 139325483
Help
Entry
139325483 CDS
T11059
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04120
Ubiquitin mediated proteolysis
pcae04137
Mitophagy - animal
pcae04144
Endocytosis
pcae04340
Hedgehog signaling pathway
pcae04350
TGF-beta signaling pathway
pcae04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139325483 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139325483 (SMURF1)
04350 TGF-beta signaling pathway
139325483 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139325483 (SMURF1)
04137 Mitophagy - animal
139325483 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
139325483 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139325483 (SMURF1)
04121 Ubiquitin system [BR:
pcae04121
]
139325483 (SMURF1)
03029 Mitochondrial biogenesis [BR:
pcae03029
]
139325483 (SMURF1)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139325483 (SMURF1)
Membrane trafficking [BR:
pcae04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139325483 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
139325483 (SMURF1)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
HECT type E3
139325483 (SMURF1)
Mitochondrial biogenesis [BR:
pcae03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139325483 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
139325483
NCBI-ProteinID:
XP_070811480
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSNAGTRRAGSSIKVRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAIRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCYMEEPA
PYTDSTGAAGGGNCRFAETPGQDQTLQVQRLRGPDVRSHVQTPQNRPHGHQSPSPDLPEG
YEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFV
DHNNRTTQFTDPRLHHIMNHQCQLKESNQPLQAPNEGSLEDSEELPAQRYERDLVQKLKF
LRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVA
REWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGH
YINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGR
ILQHELKPNGRNVSVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFD
HKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVEAFDEERRARLLQFVTGS
TRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKL
VTAVEETCGFAVE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcgggcacccggagggccggctccagcatcaaagtccgcctcacagtgctt
tgtgccaagaatcttgcaaagaaagatttcttcaggcttcctgaccccttcgcaaagatt
gtggtggatggatctggtcagtgtcattccaccgacactgtgaagaacaccttagatccc
aaatggaaccagcattatgatttatacgttggaaaatcagattctatcaccatcagtgtc
tggaaccataagaaaattcacaaaaaacagggagctggcttcctgggatgtgtccgactt
ctttccaatgccatcagcaggctaaaagatacgggataccagcgtttggatctatgcaaa
ctaaatcccacagacactgatgcaatccgaggccagatagttgtcagcctgcagacacga
gataggataggcacaggagggtctgtggtagactgcagggggctcttggagaatgaagga
acggtttatgaagactcgggacctgggaggcccctgagctgttacatggaagagccagcc
ccatatacagacagcacaggagctgccggtggagggaactgcaggttcgcagaaacccct
ggccaggatcagaccctgcaggtccagcgattgcggggtcctgatgtaagaagccatgtc
cagacaccccaaaatagaccccatggtcatcagtcgccatcaccggatctgcctgaaggc
tatgagcaaaggacaacagtacagggacaagtttactttttgcatacacaaactggggtt
agcacctggcacgatcccaggataccaagagaccttaacagtgtgaattgtgatgaactt
ggacctctgcctccaggctgggaggttagaagtacagtatcaggaagaatatattttgta
gatcataataacagaaccacccagttcacagacccaagactgcatcacataatgaatcac
caatgccaactaaaagaatccaaccagcctttgcaagcaccaaacgagggctcgttggaa
gacagcgaggagctgcccgctcagcgatacgaacgggacttggtgcagaagctcaagttc
ctccggcacgaactctcccttcagcagcctcaagctggccactgccgcatcgaagtatcg
agggaagaaatattcgaggaatcttaccgtcagataatgaagatgaggccgaaagatctg
aagaagaggctgatggtgaaatttcggggagaggaaggcttagattatggtggagtggca
agggaatggctgtaccttctatgtcacgaaatgctgaatccatattacgggcttttccaa
tattcaactgataacatttacacgctgcaaataaatcccgattcctccatcaaccccgat
catctgtcttatttccactttgtcggtcggatcatggggctggcggtgttccacgggcat
tacatcaacgggggtttcacagtccctttctacaaacagctgctgggcaaacccatccag
ttgtctgacttggaatcggtggatccagagctacataagagcttagtgtggattttagag
aatgacatcactccagttctggaccataccttctgcgtggaacacaatgcattcggcaga
attctgcagcacgaactcaaacctaacgggagaaatgtttccgttacggaggagaacaag
aaagaatatgtcaggctgtatgtaaactggcggttcatgagaggaattgaagcccaattc
ctggcccttcagaaaggttttaatgaacttattcctcaacacctcctgaagccttttgac
cataaggaacttgagctcatcatcggtggcctagataagattgatctgaacgactggaaa
tccaacacgcgtctgaagcactgcatggccgacagcaatatcgtgaagtggttctggcaa
gcggtggaggccttcgacgaggaacggagagcgcggctgctccagtttgtgacaggttcc
acgcgggtccccctgcagggtttcaaggctttgcaaggttctacaggcgcagcaggaccc
aggctgttcactatccacttgatagatgcaaacacagacaacctcccgaaagctcatact
tgctttaaccgaattgacattccgccttacgagtcctacgagaagctttacgaaaagcta
gtgaccgccgtggaagagacctgcggctttgcggtggagtga
DBGET
integrated database retrieval system
