Pituophis catenifer annectens (San Diego gophersnake): 139325486
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Entry
139325486 CDS
T11059
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139325486 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139325486 (GSPT1)
03012 Translation factors [BR:
pcae03012
]
139325486 (GSPT1)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139325486 (GSPT1)
Translation factors [BR:
pcae03012
]
Eukaryotic type
Release factors
139325486 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
139325486
NCBI-ProteinID:
XP_070811486
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MEANGSGSSSDSAPDCWDQADLEPSSGSAAAAVDEEAAAATVAAAAAAASGPGSAQLESE
EEQQQQLLGAAFSRHLNVNAKPFVPNVHAAEFVPAFLRGGPGQPAPPTPPSPPTPTAPSL
THGASAESSQEDLPSCEGSNVAIGMEISEAVVENGETEMSPEESWDHKEEIIEPELASGP
SGDAGPIEESTQEMMEEEEEMPKPKSMVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMY
LTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTI
LDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLI
VLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPSDFC
PWYIGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMP
NKHNVEVLGILSDDVETESVAPGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQ
IVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIAR
LRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcagcgggagcagcagcgactcggcgcccgattgctgggaccaggcg
gacctcgagcccagcagcggaagcgccgccgccgccgtggacgaggaagccgcagcggcg
acggtggcggcggcggcggcggcagcgtcggggcccggctcggcccagctggaatcggag
gaggagcagcagcagcagctcctgggcgcggccttcagccggcacctcaacgtcaacgcc
aagcccttcgtgcccaacgtccacgccgccgagttcgtgccggctttcctgaggggaggc
cccggacaacccgcgccgccgacgcccccttcgcctccgacgccgaccgccccgtcgctg
acacacggggcgtcggcagaatcatcacaagaagacctgccgtcttgtgaagggtcaaac
gttgccattggtatggaaatctcggaagccgttgtagaaaatggagaaacggaaatgtcc
cctgaggaatcgtgggaccacaaagaagaaatcattgaacccgaattagcaagtggccct
tccggtgacgcagggcccattgaagagagcacccaggaaatgatggaggaagaggaggag
atgccaaaacccaaatccatggtggctccccctggtgctcccaagaaggaacacgtgaat
gtggtgttcattggacacgtagatgccggaaaatcaacaattggagggcaaattatgtat
ttgacaggcatggttgataaaagaacgctcgaaaaatacgaaagagaagctaaagaaaaa
aacagagaaacctggtatctctcttgggccttagacacaaaccaagaagaacgggacaag
gggaaaacagtggaagtaggccgtgcctattttgaaacagaaaagaaacatttcacaatt
ttagatgccccagggcataagagctttgttccaaatatgataggcggtgcttctcaagct
gatttagctgtattggtaatctctgcgagaaaaggagaatttgaaacaggtttcgagaaa
ggtgggcaaacaagggagcacgccatgctagcaaaaacagcgggtgtaaaacacttaata
gttctcattaacaaaatggatgacccaactgtgaactggagcaacgaaaggtatgaagaa
tgtaaagaaaaactggtgccattcttgaagaaagtggggttcaatcccaaaaaggacatt
cacttcatgccctgctcgggactgactggagcgaatctcaaggagccatctgacttctgt
ccttggtatattggcctaccatttattccatatctggataacttgccaaacttcaaccga
tcaattgatggaccaatcaggctgccaattgttgataaatataaggatatgggcacggtg
gtgttgggaaagctggaatcagggtctatttgcaaaggacagcagctcgtgatgatgcca
aacaagcacaacgtggaagttcttggaatcctttccgatgacgtagagaccgaatccgta
gctccaggtgaaaatttgaagatccgactgaaaggaatcgaagaggaggaaattctcccg
ggctttatactctgcgatcttaataacctatgtcattctggacgcacgtttgatgctcag
atagtgatcattgaacacaaatccatcatctgcccaggttacaacgcggtgctccatatt
catacctgcattgaagaagtcgagattacagccttaatctgtctggtagacaagaaatca
ggagagaaaagcaaaacacggccccgttttgtcaaacaagatcaagtatgcattgcccgt
ttacggacggcaggaacgatctgcctcgagacattcaaagacttccctcaaatgggccgc
ttcaccttaagagacgaaggtaaaaccattgcaattggtaaagttctgaaattggttcca
gagaaggactaa
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