Pituophis catenifer annectens (San Diego gophersnake): 139325519
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Entry
139325519 CDS
T11059
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03430
Mismatch repair
pcae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139325519 (PMS2)
03460 Fanconi anemia pathway
139325519 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139325519 (PMS2)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
139325519 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
139325519
NCBI-ProteinID:
XP_070811545
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MELTPGVEKTIKPIDRRSVHRICSGQVVLNLCTAVKELVENSLDAGATNVEVKLKDYGAD
LIEVSDNGCGVEEDNFAGLTLKHYTSKIQDFSDLINVETFGFRGEALSSLCALSNVSIVT
CHKSANIGTRLAFDHSGNITRRVPFSRPQGTTVSVQQLFLTLPVRHKEFQRNIKKEFAKM
VQILQAYCIICTGVRINCTNQVGQGKKQAVVSTSGSSTLKENIGAIFGHKQVQTLIPFVQ
LPPSEEVCEEYGLNVSALPTKLYTIAGFVSQCNHGDGRSTTDRQFFFINQRPCDPGKVSK
VVNEIYHMYNRHQYPFIVLNIRAESGCVDINVTPDKRQILLQEEKLLLAILKTSLMAMFG
TDVNKLAVNQKLTDVEGNLKSFLRNEGEASPSETSTRPFSPNRDETSTIIARLKESVSRG
KTFALRETERAQPKHRPTTSQGIFQMLAGFSASPRKKILLNEGSEDGSEVDSRNSPLAGR
KLEKSNEDTDSGLGSVSAESDGGLSTPETAVHFRAESAGDSSKEKSSVSSGEIQSSECGS
SGVFLPSEPNQNEEGGFSRQAASSPKAKRFKISQPLSPKAHFSAMTPEQDSDAQPLYDVP
VKMEKRMVPLAVSWSSLTGRIQRQIKRQETEGEMLKFRKFRAKISPGENKTAEDELRKEI
RKEMFANMEIVGQFNLGFIIAKLKSDLFIIDQHATDEKYNFEMLQEHTVLQGQKLIKPQN
LNLTAVSESILMDNLEIFQKNGFDFVVDENAPVTQRVKLISLPTSKNWTFGPQDVEELIF
MLSDSPGIMCRPSRVRQMFASRACRKSVMIGTALTASEMKKLISHMGEIEHPWNCPHGRP
TIRHLANLDLITQL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggaattgactccaggagtggaaaaaacgatcaagccaattgatcgcagatcagttcat
cggatctgctcaggccaagtggtgctgaatctatgtaccgctgtaaaagagctggtggaa
aacagcctcgatgctggcgctactaacgttgaagtgaagcttaaagattatggagcggat
cttattgaagtctctgataacggttgtggcgtagaagaggataactttgcaggcttgaca
ctgaagcattatacttccaagatccaagacttttctgacctcatcaacgtggaaacgttt
ggctttcgaggcgaagctctgagctctttgtgcgcgttaagcaacgtttccattgtcact
tgtcacaagtccgccaatatcgggacccgcctggcgtttgatcacagcgggaacatcacc
aggagagtcccgttctcccggccacaggggaccaccgtcagcgtccagcagctgtttctt
actttgccggttcgacacaaagaatttcagcgtaacataaagaaggagtttgccaaaatg
gtccagatcctgcaagcgtactgcatcatttgcaccggggttcgaattaactgcaccaac
caagtgggccaagggaagaagcaggccgtagtgagcaccagcggaagttctactttaaaa
gaaaacatcggcgccatatttggacacaaacaggtacaaaccctgattccctttgtgcag
ctgccaccgagcgaagaagtctgtgaagaatacggcttgaacgtttctgctctgcccact
aagctttataccatcgcaggatttgtttcgcagtgcaatcacggcgatgggaggagcaca
acggatcggcagttcttttttattaaccagcggccatgcgatccaggaaaggtttccaaa
gttgtaaatgaaatctatcatatgtataacaggcaccaatatccatttattgttcttaat
atccgtgcagaatctggatgcgtggacatcaacgtgactccggataaaaggcagatcttg
ctccaggaagagaagcttttattagcaatcctaaaaacatcgttgatggcgatgtttggc
actgacgttaataaattggcggtgaatcaaaagctgaccgatgttgaagggaacttgaaa
agcttcctccgaaacgagggagaggcgtctccctcagagacgtcaaccaggcctttttct
ccaaatcgggacgagacatcgacgataattgcccgtctgaaggaatccgtttctcgaggg
aaaacctttgctcttcgggagaccgagagagctcaaccgaaacacaggccaaccaccagc
caaggaatattccagatgcttgccggtttttccgcctctccccgaaagaaaattcttctc
aacgagggatccgaagacggaagtgaggtggattcgaggaattccccgcttgcgggcagg
aagttggagaaatcgaacgaagatacggattctggtttggggagcgtctccgccgaatca
gatgggggtttgagcacgccagaaacggccgtccattttagagccgaaagtgctggggat
tcttccaaagaaaaatccagtgtttctagtggagaaatccagagcagcgaatgtggatct
agcggggttttcttgccctccgaaccaaaccagaacgaagaaggcgggttctctcgacaa
gccgcttcatcccccaaagcaaaacgttttaaaatcagtcaacctctttccccaaaagcc
catttctcggcgatgacccccgaacaggactctgacgcgcagcccttgtatgacgtcccg
gtcaaaatggaaaagaggatggtgcctttagccgtctcttggagcagcttaacgggccga
atccagaggcaaattaagcgccaggagacggaaggagaaatgctgaaattccgaaaattc
agagcaaagattagcccgggagaaaacaaaacggcggaagatgaattaagaaaggaaata
aggaaagagatgtttgctaatatggagatcgttggccagtttaacctgggctttatcatc
gccaagctgaaatccgacctcttcatcatcgatcagcacgctaccgatgaaaaatacaac
tttgagatgctgcaagagcacaccgtcctgcaggggcaaaagctgatcaagcctcaaaat
cttaatttaaccgctgtgagtgaaagtatcttaatggataatctggagattttccaaaaa
aatggatttgattttgtggttgatgaaaacgctcctgtaactcagagagtgaagctcata
tctttaccaaccagcaaaaactggacttttggtcctcaagacgtagaagaattaatcttt
atgttaagcgattctccgggaatcatgtgcaggccatccagagtaaggcagatgtttgcc
tctcgagcgtgtcgaaaatccgtgatgattggaaccgccctcacggccagtgaaatgaag
aaactgatttctcacatgggcgaaattgagcatccttggaactgtccccacggcagaccc
accatacgacatttagccaacctggacctcattacacaattgtga
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