Pituophis catenifer annectens (San Diego gophersnake): 139325891
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Entry
139325891 CDS
T11059
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139325891 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139325891 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139325891 (VPS36)
Membrane trafficking [BR:
pcae04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
139325891 (VPS36)
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139325891 (VPS36)
Exosomal proteins of colorectal cancer cells
139325891 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
139325891
NCBI-ProteinID:
XP_070812034
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDRFAWATGLLEIHENLVTQQRGVRLYDGEEKLKFETGVLLLSTHRLIWRDQKNHECCMA
VPLSQIIFIEEQAAGIGKSAKIVVHLHPVGSNKDPGPFQTSKYSYIKLSFKEHGQIEFFR
RLTEEMSQRRWENMPASQTIDVDRASQSGRIRAAGIVGIERKLEERRKEMDKNISEAFED
LSKLMEKAKEMVELSKSIASKIREKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTH
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELLSHNEEEMVASALETVSEKGSLTAEEFAKLVGMSVLLAKERLLLA
EKMGQLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcgcctgggctactggcctcttggagatccacgagaacctcgtcacgcag
cagcgcggggtccgcctgtacgatggggaggaaaagttgaagtttgaaactggagtatta
ctccttagtacacacagattgatctggagagatcagaaaaatcatgaatgctgtatggct
gttcccctttcccaaattatcttcattgaagagcaagcagcggggataggaaaaagtgcc
aaaatagtagtacatcttcatccagtaggttccaataaggatcctggcccattccagact
agtaaatactcgtatatcaagctttctttcaaagaacatggtcagattgagttcttcagg
aggcttacggaagaaatgtctcagcgcagatgggagaacatgccagcttctcaaaccata
gatgttgacagggcttcacagagtggaagaataagagctgcaggaattgttggcattgag
aggaaattagaagaaagaagaaaagagatggataaaaatatttctgaggcttttgaagac
ctcagcaagctgatggaaaaggcaaaggaaatggtggaattgtccaaatcaattgctagc
aagatcagagaaaagcagggtgacatcactgaagatgagacaataagatttaaatcctat
ttgttgagcatgggcattgccaatccagttacccgggaaacctatggatctggcactcat
taccatatgcaactggcaaaacaattagctggaattttacaggcacctttagaggaacgg
ggaggaataatgtccctcacagaagtttattgtctggtgaatcgtgctcgtggcctagag
ttgctttcccctgaagatctagtaaatgcttgtaagatgttggaatcgctaaagttacct
ctaaggttacgtatattcgacagtggtgttatggtgattgaactcctatcacataatgaa
gaagaaatggtggcgtctgctttagagacagtttctgagaagggatctcttaccgctgaa
gagtttgcaaagcttgtaggaatgtccgtgcttttagccaaagaaaggttgctgttagct
gaaaagatgggtcagctttgcagagacgattctgtagaaggcttgcgattctatccaaat
ttatttcttacccaaagctga
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