Pituophis catenifer annectens (San Diego gophersnake): 139325982
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Entry
139325982 CDS
T11059
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139325982 (YBX1)
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139325982 (YBX1)
03041 Spliceosome [BR:
pcae03041
]
139325982 (YBX1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
139325982 (YBX1)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139325982 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
139325982 (YBX1)
Spliceosome [BR:
pcae03041
]
Common components
Common spliceosomal components
General mRNP proteins
139325982 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
139325982
NCBI-ProteinID:
XP_070812156
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSSEAETQAPPSAATLAAPAAAPPAAAPLASPTSPSPAVADAKPSNGGNSSGGGGGGNGT
NGGLGLAAPPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPR
KYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNQYRRYPRRRGPPRN
YPQNYQNSESGEKNEGSENLPEGQSQQRRPYRRRRYPPYYMRRPYGRRPQYSNAPVQGDL
VEGTDNQGAGEQGRPVRQNLYRGYRPRYRSVTGFFRGPPRQRQPREEGNEEDKENQADEV
QGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAAEPSAENTSAPEAEQGGAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccaggcgcccccctccgccgccactctggcggccccggcg
gctgccccgcccgcggcggccccgttggcgtcgcccacgagcccctccccggccgtcgcg
gatgccaagcccagcaacggcggcaacagcagcggcggaggcggcggcggcaacggaacc
aacggcggcctgggcttggcggcgccccccgccggcggggacaagaaggtcatcgcaacg
aaggttttggggacagtgaaatggttcaacgtaaggaatggctatggcttcatcaacagg
aatgacaccaaggaagatgtgtttgtccaccagactgctatcaagaagaataaccccagg
aaataccttcgcagtgtaggagatggagaaactgtggagtttgatgtggttgaaggcgaa
aagggagcagaggcagccaatgttacaggtcctggcggtgttcccgtgcaaggcagcaaa
tacgcagcagaccgtaaccagtacagacgataccctcggcgcagaggccctccgcgcaac
tacccacaaaattaccaaaacagcgagagtggggaaaagaatgaggggtcagagaacttg
ccggaagggcagtcccaacagcgccgcccctaccgcaggaggcggtaccccccttactac
atgcgtcggccctacggccggcggccacagtactccaatgcccctgtgcaaggagaccta
gtggagggcaccgacaaccagggtgcaggggaacaaggcaggcctgtcagacagaacctc
tatcggggttacagaccgcgctatcgcagcgtgaccgggtttttcaggggtcctcctcgc
cagcgacagccccgggaggaaggcaacgaagaagacaaggagaaccaagcagatgaggtc
cagggtcagcagccacctcagcgtcggtaccgtcgcaacttcaactaccgacgcagacgc
ccagagaaccctaaaccacaagatggcaaagagaccaaggcagccgaaccatcagctgag
aacacgtccgctcccgaggccgagcagggcggggctgagtaa
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integrated database retrieval system
