Pituophis catenifer annectens (San Diego gophersnake): 139326182
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Entry
139326182 CDS
T11059
Symbol
UBE4B
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04120
Ubiquitin mediated proteolysis
pcae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139326182 (UBE4B)
04120 Ubiquitin mediated proteolysis
139326182 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139326182 (UBE4B)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139326182 (UBE4B)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
U-box type E3
139326182 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
139326182
NCBI-ProteinID:
XP_070812426
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGQPVPGSSSGAPHNLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSLSQV
DVDSGIENMEVDESDRREKRSLSDKEPPSGLEISEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSEQFKQNPKDVFSDFKDLIGQVLMEVLMMSTHSREENPFASLTATSQPIAAAARSPD
RNLVLNTGSNPGTSPVFCNVGSFGSSSLSSLYGSSPIPIFNIASHPPLAGSFLPSSPSPV
APLPVSSLSVSPHLLPAGPLSVQPSSPRYRPYTVAHPWTLAAPPAAPLTGTSGLSASSTP
PGINPSPPAAQVPSSRGRPVATTLPLFSMLGSSRTSSPGRMPSSMYDSPFSLFLAISDVS
GDSSEEENEEEEEEDFSCVPFGSSGGGSGGASISDSCSDHFAIETCKETEMLNYLIECFD
RVGIEERKAPKMCSQPVVSQLLSNIRSQCISHAALVLQGSLTQLRSNQQQSLLVPYMLCR
NLPFGFIQELVRTTHQDEEVFKQIFVPILQGLALASKECSFDSDNFKYPLMALGELCEIK
FGKSHPVCSLVVSLPLWLPKSLSPGMGRELQRLSYLGVFFGLSVFAEDDPRVVEKYFSGP
TITLENTRVVSQSLQHYLESARQELFKILHSILLNGETREAALSYMAAVVNANVKKAQMQ
ADDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPSYIFHPRCRIMVPADETRVKATLEDVS
SWMVELSRDQSLFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKN
NESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYSVVIQLLL
RILDPAYPNITLPLNPDVPKVFAAMPEFYVEDIAEFLFFIVQYSPQVLYEPCTQELVTFL
VIMLCNQDYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSVKLLVPSLMKFYT
DVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTT
FLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVD
MFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQL
TDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVDEIV
AKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSVILRHLLNSSTDPFNRQTL
TENMLEPVPELKEQIQAWMRDKQHPDH
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagtgccgatgagatccgtcggaggcgccttgcccggcttgctggcgga
ccctcttcccagcccactaccccacttacgtctccgcaaagggagaaccccccggggcag
ccggtcccagggtcgtcttcaggggcaccccacaatcttggactcaatgttcacagtatg
acccctgctacctctccaatcggtgcgtcaggtgttgcccatcgcagtcagagcagcgaa
ggtgtgagttcgctcagcagctcgccctccaacagcctcgaaacgcagtcccagtccctt
tcccggtcccagagcatggatatcgatagcgtctcctgcgagaaaagcttgtcccaggtc
gatgtggattcagggatcgaaaacatggaagtggatgagagcgaccggagggagaaacgg
agcctctcggataaggagcctccctcaggattggaaatctcggaggaacaagccttacag
ctggtttgtaagattttccgggtctcttggaaagaccgcgatagagacgtcatcttcctg
acttccctttcggaacagttcaagcagaaccctaaagacgtgttctcggattttaaagac
ttgattgggcaagtgctgatggaagtcctaatgatgtccacccactcgagagaagaaaac
ccctttgccagtttgaccgccacgtcacagcccattgcggccgccgcccgctcgccggat
agaaacttagtcctgaataccggctccaacccgggaactagccccgtgttttgcaatgtg
ggctcgtttggctccagctccttatcaagtctctacggaagcagccccattcccattttc
aacatcgcaagtcaccccccgttggctggctcctttctcccttcttcccccagccccgtg
gctcccctccccgtgtcttccctgtctgtcagcccccacctcctgccagcagggccgctc
agtgtccagccctcgtccccacggtaccgtccgtacacagtggcacacccctggaccttg
gcagctcctcctgccgcacccttaacaggaacctccggtctttcggcttcttcgactcct
ccgggcataaaccccagtcctccagctgcacaggtcccttcgtccaggggtagacccgta
gccaccaccctgcctctgttctccatgttgggcagcagccgtacctcttccccaggcagg
atgccctctagtatgtacgacagccctttctccctcttccttgccatttctgatgtctct
ggagacagttctgaggaagaaaatgaggaagaggaggaggaggatttttcttgtgtgcca
tttgggtccagtggcggaggctccggaggggccagcatttccgactcgtgcagcgaccac
ttcgccattgagacgtgcaaggagacggagatgctaaactacctcattgagtgcttcgac
cgagtggggattgaggaaaggaaagcgccaaagatgtgcagccagccggtggtgagccag
cttctgagcaacatccgatcccagtgcatttctcacgcggctttggtgctccaaggatcc
ctaacgcagctgaggtcaaaccaacagcagtcgttgttagtcccgtatatgctctgtagg
aatctcccgttcggtttcatccaggaattggtgaggacgactcaccaagatgaagaagtc
ttcaaacagatctttgtacctattttacaagggctggctcttgcttcaaaagaatgctcc
tttgatagtgacaactttaaatacccccttatggctttaggggaactctgcgagatcaag
tttgggaaatcgcatcctgtctgcagtttggtggtctctttgcctttgtggttgccaaaa
tctctaagccccgggatgggccgagagctccagagactctcttaccttggggtattcttc
ggcctctccgtcttcgctgaggatgaccctagagttgtcgaaaaatatttctcggggcct
accattactttggaaaacacgcgggtcgttagccagtcattgcaacattacctggaatct
gccaggcaagagttattcaagatcctgcacagtattctgctcaacggagaaacgcgggaa
gctgctctcagctatatggcagccgtggtcaacgccaacgttaaaaaggcacaaatgcag
gcggacgatcggctggtgtctacagatggcttcatgctgaacttcctgtgggtgctgcag
cagctgagcacaaaaatcaaactcgagacggtcgatccgtcctacatcttccatcctcgg
tgtcgaatcatggtgcctgcagacgaaacgcgagtcaaagccaccttggaggatgtcagc
agctggatggttgagctgtccagggatcagtctctcttctctgagccaaaattcccaacg
gaatgtttcttcctgaccctccacgcccaccacctctccatcttaccgagttgccgtcga
tacatccgtcgactcagagccatccgggagctgaacaggaccgtggaggatttgaagaat
aacgaaagtcagtggaaggattctcccctagctaccaggcatcgagagatgttgaaacga
tgcaaaacccaactcaagaaattggtgcgatgcaaagcttgcgcagacgccggcctgtta
gatgagaattttctccggaggtgcctcaacttttacagcgtggtgatccagctcttgcta
cggattcttgatcctgcctaccctaacataacactgcctttaaacccagatgtcccgaaa
gtctttgcagcgatgcctgagttttacgtggaagatattgcggaatttttgttttttatt
gtacaatactcgcctcaggtactctacgagccttgcactcaggagctggtgaccttcctc
gtgatcatgctctgcaaccaggactacatccggaacccttacttggtggccaagctggtg
gaggtgatgttcatgaccaacccagccgtccaaccccggacccagaagttcttcgaaatg
atcgaaaaccacccgctgtccgtcaagttgctggttccttccctgatgaagttttacaca
gacgtggagcacaccggggccaccagcgaattctacgacaaatttacgatccgctatcac
atcagcaccatcttcaaaagcttgtggcagaacatagctcaccacgggactttcatggaa
gagttcaactccggcaagcagtttgttcgctatatcaatatgctgatcaacgacacgacg
ttcttgctggatgagagtttagagtccctcaaacgcatccacgaagtgcaggaagagatg
aagaacaaggagcagtgggatcttctccccagggatcagcaacaggctcggcagtctcag
ctggcccaggacgagcgagtctcacgctcctatctggctctggccacagaaacggttgac
atgtttcatatcctcaccaaacaagttcagaagcctttcctcaggcctgagcttggacca
cggttggctgcgatgctgaacttcaaccttcagcagctgtgcggccccaaatgccgcgat
ctgaaagtcgaaaaccccgagaagtacggctttgaaccaaagaagcttctggatcaactg
acagatatctacttgcagctggattgtgcccgttttgccaaagcaatcgcggacgaccag
aggtcttacagcaaggagctatttgaggaggtgatttcgaagatgaggaaagccggcatc
aagtcgaccatagcgatagaaaaattcaagctgctcgcggagaaagtggacgaaatcgtt
gccaagaacgcccgcgccgaaattgactacagtgatgctccggatgagttccgagatcca
ctcatggataccttaatgactgacccagtccggttgccatcgggaactatcatggatcgc
tccgtcattctgcggcaccttctcaactcctccacggatcccttcaatcgccagacacta
acagaaaatatgctggagccagtgcctgagctgaaagagcaaatccaagcttggatgagg
gacaagcagcacccggatcactga
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integrated database retrieval system
